Atur044653.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905147355.1
- Location
- LR990301.1:4002730-4029528[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-14 1.5e-11 45.4 0.0 1 39 141 180 141 186 0.92 2 2 2e-18 2.3e-15 57.6 0.0 1 43 346 389 346 391 0.95
Sequence Information
- Coding Sequence
- ATGTGCCCCTCTCACTCTCACACTGTGACGGGTCGAGGTGaacccgccgccgcgccgccccaGCTTCTCCAGCATTTACTGCAGATGCAGTTGCAAGCTCAGAACCCTCAAGCCATCGCACAGCTGCAACAGATGATCGCGACGTTGGCGGCGCTGGGTACGGGGCTGGTCCCGCCAGCGCTGTCCCAGGCGTGGCTGATGCAGCGGCTGTCCCACCGGCTGCCTGAGAGGCTCCAAGATATGGAAAAGGCGTCCGCGCCAAGTGCGTCGCCGACTTCCGCAGAACAGCCCCTGGACCTTAGCGCCAAGTCCACCTCCAGCACCAGTGGTACTCCGCCCCCCGACGGCAAGGACAACGCCAGATTGAAACGCGCCATAATCGAAGGCGGGGCCGGCAACAGCAGCACGCGGCGCACTTACACCGAGGACGAGCTCCAGTCAGCCCTCCGGGACATCCAGTCCGGCCGCCTGGGCacccggcgcgccgccgtcgtcTACGGCATCCCGCGCTCCACCCTCCGCAACAAGGTCAACAAGTTCGGCCTCGCCGCCGAGCCCGCCGACTCGGACCCCGACTCCGACCCCGAACGACCCGACTCGCCCCCATCCGTCATCCTCAAAATACCCACATTCCCACCCCCAGATGATAAGAGCCCGTCCCCGGCTGCCCCAGTGGCCCCGGTGACCCCGATCCTGCCGCCCCAACCGCCGCTCAACACGCCGTCGCCTCTACTTTTGCCAGCGTCCGTATTCGCAGATCCGCCTTCCACCCAACACCTCTTCACGTCGCTCAGCGATGTCATAGCCAAGAGCATAAGTCAGAAGTTCCAACAGCCGCTGGATCGGCCACATCAACAGGCGGAGTTAGCGTTCATGCGCCAGCACCAAGACAGACACGTGTCCGTCATCAAGACTCCGCCGGATAACTCCAGAAACTACTCAGTACCGAGCAACTCTCGTGCGCCCACGAACAACAATGGACAGCCCGCCACGGGGAAAGGGACTAGACCCAAGAGAGGGAAATACAGAAATTACGATAGAGACAGCCTGGTGGAGGCAGTCAAGGCGGTGCAGCGAGGTGAGATGTCGGTCCACCGCGCCGGGTCCTATTACGGTGTGCCTCATTCGACGCTCGAGTATAAAGTTAAGGAGCGGCATCTCATGCGGCCACGCAAACGCGAGCCGAAGCCGCCCCAGGACGTGAAACCGCAGCTGCCTAAACCGCCGCCGCCGAAGCCGATGACCAAGCCGTTCACGAACGGCCTCAACGGCCCTGGCGAGGCACCCGGATACCCGCCGAGCTACTTCTGGCCGGGAGCCGGTTTCCCGGCCCCGCCGACGCCGGACCTTTACGCGTCGCACATGATGCGTCGGCTCAGGGAggaggcgccgccgccggccaaCGGGTCGTTCCTCGAAGGGATCATCAGGTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGGCGAGCCGCGGCCGCCGGCGCCCAACGCCGAGGCGCCGAGCCTGCTGCGGCGGCTGGCGGGCGGCGGCGAGGAGGACGCGCCGCCGGCCCGACGGCCCCGCATCGACTCGTCGGACCGGCAGCTGGCCGCCGAGATGCGGGAGGCGGTGCAGCGGCTGCGCGCGGACAAGCTGCGGCCGCGCAACGGCACGCCGACGCCGCCGGCGGCGGGCTCGctctcgccgccgccgccgcacgcgccgcccgccgcgccgccggaCCGCGCCTAG
- Protein Sequence
- MCPSHSHTVTGRGEPAAAPPQLLQHLLQMQLQAQNPQAIAQLQQMIATLAALGTGLVPPALSQAWLMQRLSHRLPERLQDMEKASAPSASPTSAEQPLDLSAKSTSSTSGTPPPDGKDNARLKRAIIEGGAGNSSTRRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAAEPADSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPAAPVAPVTPILPPQPPLNTPSPLLLPASVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHQQAELAFMRQHQDRHVSVIKTPPDNSRNYSVPSNSRAPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQLPKPPPPKPMTKPFTNGLNGPGEAPGYPPSYFWPGAGFPAPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPPAPNAEAPSLLRRLAGGGEEDAPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAAGSLSPPPPHAPPAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072366;
- 90% Identity
- iTF_00660231;
- 80% Identity
- -