Msca000984.1
Basic Information
- Insect
- Melanostoma scalare
- Gene Symbol
- grh
- Assembly
- GCA_949752695.1
- Location
- OX456984.1:5981424-6053133[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.27 9.3e+03 -2.4 3.0 7 39 85 117 76 136 0.58 2 2 1.1e-63 4e-59 201.5 0.3 24 221 526 718 511 720 0.93
Sequence Information
- Coding Sequence
- ATGGCTGGTAAATCGATTCGgAGGCGAACGGTACTTACTAGCCAAGCTGATTCACCACCACCACTGCCATCAACACCACAGGTGCTACCGATGTCGCTGGCGACATCAAGCAGTCCTGATCAGGTGATCATCCAAAACCATAGCTACCTTCCCACATCCACGGCTTCAAGGTACTTTGAGCACCCGCTGAATATTTCACCCGGTCAGACGGGGCAAAATGACGATGATCaccatcagcagcagcagcaccaccaacatcaccaacaacaacaacagcagcagcagcaacaacaacagcagcagcagcaacaacagcatcatcatcatcatttggTACCATCACCGAGTTCAGTGAATTTAGGTGGACTGTCCAACTCGCACCAAGTCCATCAGGTGCAGAATGCGAATGGCAGCACGTCGTTTGTTTACGAATACTACAAAGTTTCAGACAAGGACAATGACGAATTACACTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACAcccatcatcaacatcatcggCGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCAGCAACAGCTGTTGTTGTAACCACCGATCAGCATcgccagcaacaacaacaacaacagcagcagcatcaaGCAATTAGCATTAAACGTGAACCCGAAGATCTGCGAAAGGATCCCAAATGTGGCAATAACGGTGCGGGCAACAACAACAGTGGCAATGGCAACAACGGCTCTGGTGGACACAGTCAAAAGGTATTAGTTGTACAATCACCATCGCCGTCAATACAAATTAAAGATCCACCACCCAGTCCTGGAAGTCCAACAAACGAAACAATGTACGCTGCCAGCGGCGGCACCCAAATCTACCTACAGGGCCCACACCAGACAGGTTCTTCTGTAACAGGTGGATCAAATATTAACACACACAGCCCCAGCCCTGGACCGTATATCACACCGGATAGCTATGGAATGTACACTACACGTCTTGCCACTGGGCCAACATCGACATTTATCTCAGAGCCATATTATCGAGAATACTTCGCTGCCGATGGACAGGGTGGTTATGCACCCGCAACACGCACAGTCTATGGTGAAAGTGATGGCCCACAACCAGGTACAACCTATGAAGGCCGTTTTACTACATCCCACACAAAAAATGGAACACCTGTCTATGCAAAAACTGTTACAGCAGCTGGCCTCACAGTGGATTTACCAAGTCCCGATTCGGGAATCGGTGCTGATGCTATTACGCCGAGGGATCAAAATAATCTACAACAGTCATTCGATTACACGGAACTATGTCAGCCTGGTACTTTATTAGACAACAGCGGTGCAATACCAGTTTCAGTTAGTAGCATGCAACGTGCTGTTAGCATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAGTGGTACACCAGGGACACCAGGAACGACACGATCAAGGCCATGGCATGATTTTGGTCGGCAAAGTGATGCGGATAAAATTCAAATACCAAAAATATTCGTAAATGTAGGATTTAGATACCATCTAGAAAGTCCGATCAGTTCGTCGCAACGACGGGAAGATGACCGAATAACGTACATCAACAAAGGACAATTTTATGGCATCACTTTGGAGTACATTCCAGACCAAGATAAGCCCATCAAAAATACCACAGTAAAGAGTGTAATCATGTTAATGTTCCGAGAAGAAAAAAGCCCCGAAGATGAAATCAAAGCTTGGCAGTTCTGGCATAGTAGACAGCATTCTGTGAAACAAAGAATACTTGATGCTGACACGAAAAATTCCGTTGGGCTTGTTGGCTGTATTGAGGAAGTCTCACATAATGCAATTGCGGTCTATTGGAATCCCTTGGAAAGTTCAGCTAAGATCAACATCGCCGTTCAATGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGggTCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGGGACACACAGGTTTTCCATCGAGGCTACTGCCAAATAAAAGTCTTCTGCGATAAGGGTGCCGAGCGCAAAACACGCGATGAAGAACGAAGAGCGGCAAAACGTAAAATGACCGCCACCGGTCGAAAAAAGCTCGACGAGCTCTACCATCCTGTCACAGATCGCTCAGAATTCTATGCAATGCAAGATATAAGCAAACCGCCTGTACTTTTCACCCCCGCCGATGACATGGAAAAGACCTTTTATGGCCATGAGACTGATTCATTATCTGGAACGCCAGATCTTAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTTGGCACCCCAACACTAAAATTCCACAATCATTTTCCGCCCGATGTGCAGACTGATAAGAAGGACCACATTCTAGAACAGAGTTTAGTTTCTGGCTCAATGTCTGAATTCGGTCCACCAATCAAACGTGGCCGTATGTCACCTCCGATCAGTGAACGAGTAATGCTCTATGTGCGACAAGAAAACGAGGATGTTTATACGCCATTGCACGTTGTCCCACCGACCACTATCGGGCTTTTGAATGCGAtcgaaaataaatacaaaatctCCACATCGAGTATAAATAATATCTATCGTACAAATAAAAAGGGgaTTACTGCGAAAATTGATGATGATATGTTGTCATATTATTGCAATGAAGACATATTCCTGCTAGAAGTGCAACAAGTTGAAGATGACCTTTATGATATAACTCTGACCGAGCTTCCAAATCATTGA
- Protein Sequence
- MAGKSIRRRTVLTSQADSPPPLPSTPQVLPMSLATSSSPDQVIIQNHSYLPTSTASRYFEHPLNISPGQTGQNDDDHHQQQQHHQHHQQQQQQQQQQQQQQQQQQHHHHHLVPSPSSVNLGGLSNSHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNSGNGNNGSGGHSQKVLVVQSPSPSIQIKDPPPSPGSPTNETMYAASGGTQIYLQGPHQTGSSVTGGSNINTHSPSPGPYITPDSYGMYTTRLATGPTSTFISEPYYREYFAADGQGGYAPATRTVYGESDGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDNSGAIPVSVSSMQRAVSIHGGQNSPTTSLSGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFTPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01300577; iTF_00663813; iTF_00664616; iTF_01299784; iTF_00240425; iTF_00671978; iTF_00724530; iTF_01541193; iTF_00334731; iTF_00665395; iTF_00670708; iTF_01116212; iTF_01356629; iTF_00983990; iTF_01044502; iTF_00893623; iTF_01396249; iTF_00187807; iTF_00314911; iTF_00310772; iTF_00315702; iTF_00312351; iTF_00311567; iTF_01211663; iTF_00313207; iTF_01050975; iTF_01520736; iTF_01541920;
- 90% Identity
- iTF_01116212;
- 80% Identity
- -