Basic Information

Gene Symbol
grh
Assembly
GCA_963931855.1
Location
OZ007554.1:248164520-248271744[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.56 1.8e+04 -3.5 4.3 7 35 125 153 112 173 0.50
2 2 1.1e-63 3.5e-59 201.6 0.3 24 221 567 759 552 761 0.93

Sequence Information

Coding Sequence
ATGGAAAAAAGCTACGATGTTTATGTTATCACCACTGATTTCAGCAAGGCCTTCGATAAAATCAGTCACCAAATTATCTACGTTAAGCTACAAGCCTTTGGCTTTCCACCATCGTTCATCAAgaGACGAACGGTATTAACAAGCCAAGCTGATTCACCACCACCATCATTGCCATCAGCGCCGCAGGCACTGCCAATGTCGCTGGCGACATCTAGCAGTCCTGATCAAGTGATTATCCAAAATCATAGCTACCTTCCCACGTCCTCTGCTGCTTCCAGGTACTTTGAGCACCCGCTGAACATCTCGCCCGGCCAAACGGTGCCGAACGATGATGATCAccaccagcagcagcagcaacaacagcaacaccagcaacagcaccaccaacatcatcagcaacaacaacaacaacaacatcagcagcagcaacagcaacagcatcatcatcatttgGTGCCATCACCGTCTTCggtgaatttgggcgcactgtCCAACTCACACCAGGTCCATCAGGTGCAGAATGCGAATGGCAGCACGTCGTTTGTTTACGAATACTACAAAGTATCGGACAAGGACAATGACGAATTGCATTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACACccatcatcaacatcatcggCGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCTGCAACAGCTGTTGTTGTAACCACCGATCAACATcgccaacaacaacaacagcagcatcaGGCAATTAGCATTAAACGTGAACCCGAAGATCTGCGAAAGGATCCAAAATGTGGTAATAACGGTGCTGgcaacaataataacaacaacaacagtagCAATGGCAACGGCGCTGGTGGACACAGTCAAAAGgtaTTAGTTGTACAATCACCTACGCCATCAATACAAATTAAAGATCCACCACCCAGTCCTGGAAGTCCAACAAACGAGAACATGTACGCTGCCGGCGGCAGCACCCAAATTTACCTCCAGGGTCCACACCAGACAGGTTCTTCTGTAACAGGTGGATCAAATGTTAACACACACAGCCCCAGCCCTGGACCATATATCTCACCGGATAGCTATGGAATGTACACAACCCGACTTGCCACTGGACCGAATTCCACATTCATCTCAGAGCCATATTATCGTGAATACTTTGCTTCGGATGGGCAAGGTGGCTATGCGCCCGCAACACGCACCGTCTATGGCGATAGTGAGGGACCACAACCGGGTACAACCTATGAGGGCCGCTTCACAACATCACACACTAAGAATGGTACACCTGTCTATGCAAAAACTGTTACAGCAGCCGGCCTCACAGTGGATTTGCCAAGTCCCGATTCGGGAATTGGTGCTGATGCTATTACGCCGAGGGATCAAAATAATCTACAACAGTCATTCGATTACACGGAACTATGTCAGCCTGGTACATTATTAGACAGCAGCGGTGCAATACCAGTTTCAGTTACTAGCATGCAACGTGCTGTTAGCATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAGTGGTGGTACACCAGGGACACCAGGAACGACACGATCAAGGCCATGGCATGATTTCGGTCGGCAAAGTGATGCGGATAAAATTCAAATACCAAAAatATTCGTAAATGTAGGATTTAGATATCATCTGGAAAGTCCGATTAGTTCGTCACAACGACGAGAAGAcgatcgaataacatacatcaATAAAGGACAATTTTATGGCATCACATTGGAATACATTCCAGACCAAGATAAACCAATCAAAAATACCACAGTTAAGAGTGTAATCATGTTAATGTTCCGAGAAGAAAAGAGTCCCGAAGATGAAATCAAAGCCTGGCAATTTTGGCATAGTAGACAACACTCTGTTAAACAGAGAATACTAGATGCTGaTACGAAAAATTCCGTTGGTCTTGTAGGATGTATTGAAGAAGTCTCACATAATGCTATTGCAGTTTATTGGAATCCTTTGGAAAGTTCTGCTAAGattaataTTGCCGTTCAGTGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGGGTCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGGGATACACAAGTTTTCCATCGAGGCTATTGCCAAATAAAAGTCTTCTGCGATAAGGGTGCTGAGCGCAAAACACGTGATGAAGAAAGAAGAGCGGCCAAACGTAAAATGACCGCAACAGGAAGGAAAAAGCTCGATGAACTCTACCATCCTGTAACAGATCGTTCAGAATTTTATGCAATGCAAGACATAAGCAAACCGCCTGTACTATTCACCCCCGCCGATGACATGGAAAAgACCTTCTATGGCCATGAGACTGATTCATTATCTGGTACACCAGATCTTAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTCGGTACCCCAACATTAAAATTCCACAATCATTTTCCGCCCGATGTGCAGACtGACAAAAAAGATCACATTCTTGAACAAAGTTTAGTTTCTGGTTCAATGTCTGAATTTGGTCCACCAATCAAACGTGGTCGTATGTCACCTCCGATAAGTGAACGTGTGATGCTTTATGTGCGACAAGAAAACGAAGATGTTTATACGCCATTGCATGTTGTGCCACCGACGACAATCGGACTTTTAAATGCGGTTAGTTATTAG
Protein Sequence
MEKSYDVYVITTDFSKAFDKISHQIIYVKLQAFGFPPSFIKRRTVLTSQADSPPPSLPSAPQALPMSLATSSSPDQVIIQNHSYLPTSSAASRYFEHPLNISPGQTVPNDDDHHQQQQQQQQHQQQHHQHHQQQQQQQHQQQQQQQHHHHLVPSPSSVNLGALSNSHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNNNNNSSNGNGAGGHSQKVLVVQSPTPSIQIKDPPPSPGSPTNENMYAAGGSTQIYLQGPHQTGSSVTGGSNVNTHSPSPGPYISPDSYGMYTTRLATGPNSTFISEPYYREYFASDGQGGYAPATRTVYGDSEGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVTSMQRAVSIHGGQNSPTTSLSGGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFTPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAVSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976213;
90% Identity
iTF_01116212;
80% Identity
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