Cvar022712.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- grh
- Assembly
- GCA_951230905.1
- Location
- OX579679.1:5342398-5411321[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.09 1.5e+03 -0.9 3.0 3 40 115 152 113 159 0.74 2 2 4.1e-63 6.6e-59 199.7 0.2 24 221 559 751 544 753 0.93
Sequence Information
- Coding Sequence
- ATGTGCTACTTCTCCTTCACATTCTTCACAAAATATGACGGCGATGCCCACAGCTCCCTCTGTGTTTGCACAAACATTAGCCGGAAGTCATTGTGGGTGGCTAAGTGGTTAGCTTCCAGGGACCCGAAGAGACGAACGGTGCTGACAAGTCAATCGGATTCGCCGCCACCATCACTGCCTGCCGCACCTGAGACACTGCCAATGTCGCTGGCGACATCTAGCAGTCCCGATCAAGTGATTATCCAAAACCATGCCTACCTACCGACGTCGACTGCTTCGCGATACTTTGAACACCCGCTGAATATCTCCCCCGGCCAGACTGTTCAAAATGACGACGACCACcaccatcaacagcagcagcagcaacagcaacatcaccagcatcaccagcaacaacagcaacagcaacagcaccagcatcagcatcatcatTTGGTGGCATCGCCGAATTCGGTGAATTTGGGTGCCCTAACCAGCACGCACCAGGTGCATCAGGTGCAGAATGCGAATGGCAGTACGTCGTTCGTTTATGAATACTACAAAGTATCGGACAAGGACAATGACGAATTGCACTGGGGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGTCTATTGCTAGGTTCACAcccatcatcaacatcatcggCGTCAACGACGACAACATCACAATCATCGGTAGCTGGCGCATCAACAGCTGTTGTTGTAACCACCGATCAACATcgtcaacaacagcagcagcaacagcatcatcaAACAATTAGCATTAAACGTGAACCCGAGGATCTGCGAAAGGATCCCAAATGCGGCAATAACGGTGCGGGTAACAACAACAGTAGCAACGCCAACAACGGCGGTGGTGGACACAGTCAAAAGGTATTAGTTGTACAATCGCCGTCACCATCAATACAAATTAAAGAGCCACCACCCAGTCCTGGAAGCCCAACAAACGAAACAATGTACGCTGCCAGCGGCGGCACGCAAATTTACCTCCAGGGTCCACACCAGACAAACACTTCTGTAACAGGTGGCACAAATGTCAACACACACAGTCCCAGTCCGGGGCCGTACATCACACCGGACAGCTATGGAATGTACACAACACGCCTGGCCACTGGACCGACATCAACCTTCATCTCCGAGCCATATTATCGCGAATACTTTGCCTCCGATGGACAGGGTGGCTATGCACCCGCAACTCGTACCGTCTATGGGGACAGTGATGGACCGCAGCCGGGTACAACCTATGAGGGACGTTTCACCACATCACACACAAAGAACGGCACACCTGTCTATCCGAAAACTGTAACAGCGGCCGGTCTAacagtggatttgccaagtccTGATTCGGGAATTGGCGCTGATGCTATTACGCCGAGGGATCAAAATAATCTCCAACAGTCATTCGATTACACGGAATTATGCCAACCTGGTACACTATTAGACAGCAGCGGTGCAATACCTGTTTCGGTTAGTGGCATGCAACGAGCTGTTAGTATCCATGGTGGTCAAAATAGTCCAACAACATCGCTGAGTGGTACACCAGGTACACCGGGAACAACACGATCAAGGCCATGGCATGATTTTGGACGACAAAGTGATGCGGATAAAATTCAAATACCAAAAATATTCGTAAATGTAGGCTTTAGATACCATCTAGAAAGTCCAATTAGTTCGTCACAACGACGAGAAGACGATCGAATAACATACATCAATAAAGGACAATTTTACGGCATCACCTTGGAGTACATTCCCGATCCAGATAAACCCATCAAGAATACCACAGTTAAGagtgTAATCATGTTAATGTTCCGAGAGGAGAAGAGTCCCGAAGATGAAATCAAAGCCTGGCAGTTCTGGCATAGTAGACAACATTCTGTGAAACAGAGAATACTAGATGctgaTACGAAAAATTCTGTCGGCCTTGTGGGATGCATTGAGGAGGTTTCACACAACGCTATCGCGGTCTATTGGAATCCACTGGAGAGTTCTGCTAAGATAAATATTGCTGTGCAGTGCCTTAGTACGGATTTCAGTAGCCAGAAAGGTGTTAAGGGTCTGCCGCTGCATGTACAAATCGACACATTTGAGGATCCACGAGATACACAAATCTTCCATCGAGGCTATTGCCAAATAAAAGTCTTCTGCGATAAGGGTGCTGAACGCAAAACACGCGACGAAGAGCGAAGAGCGGCCAAGCGCAAAATGACTGCTACCGGCAGAAAAAAGCTCGATGAACTCTACCATCCTGTTACAGATCGTTCAGAATTTTACGCAATGCAAGATATTAGTAAACCACCTGTACTGTTCTCCCCCGCCGATGACATggaaaaaACCTTCTATGGCCATGAGACTGATTCATTGTCTGGTACACCCGACTTGAAAGGTGCATCACCGTTTCTACTACATGGACAAAAAGTTGGCACCCCCACACTGAAATTCCACAATCACTTTCCACCCGATGTGCAGACTGACAAAAAAGATCATATTCTCGAACAGAGTTTAGTTTCTGGTTCAATGTCCGAATTCGGTCCACCAATCAAACGTGGCCGTATGTCACCGCCCATCAGTGAACGTGTCATGCTCTATGTGCGACAAGAGAACGAAGATGTCTATACGCCATTGCATGTAGTGCCACCGACAACCATCGGACTCTTAAATGCGatcgaaaataaatacaaaatctcCACAACaagtataaataatatttatcgtACAAATAAAAAGGGGATTACTGCGAAAATTGATGATGACATGCTTTCGTATTACTGCAACGAAGACATATTCCTGCTAGAAGTGCAGCAAGTTGAAGATGACCTATATGACATAACCCTGACCGAGCTTCCCAATCATTGA
- Protein Sequence
- MCYFSFTFFTKYDGDAHSSLCVCTNISRKSLWVAKWLASRDPKRRTVLTSQSDSPPPSLPAAPETLPMSLATSSSPDQVIIQNHAYLPTSTASRYFEHPLNISPGQTVQNDDDHHHQQQQQQQQHHQHHQQQQQQQQHQHQHHHLVASPNSVNLGALTSTHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWGAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGASTAVVVTTDQHRQQQQQQQHHQTISIKREPEDLRKDPKCGNNGAGNNNSSNANNGGGGHSQKVLVVQSPSPSIQIKEPPPSPGSPTNETMYAASGGTQIYLQGPHQTNTSVTGGTNVNTHSPSPGPYITPDSYGMYTTRLATGPTSTFISEPYYREYFASDGQGGYAPATRTVYGDSDGPQPGTTYEGRFTTSHTKNGTPVYPKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVSGMQRAVSIHGGQNSPTTSLSGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQIFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFSPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976213;
- 90% Identity
- iTF_01116212;
- 80% Identity
- -