Basic Information

Gene Symbol
grh
Assembly
GCA_955652365.1
Location
OY019133.1:6654041-6720707[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.23 3.3e+03 -2.2 1.5 3 40 101 136 99 140 0.54
2 4 0.66 9.6e+03 -3.7 0.2 82 98 234 250 215 259 0.44
3 4 8.7e-11 1.3e-06 28.6 0.0 24 66 546 588 531 607 0.83
4 4 7.7e-34 1.1e-29 104.0 0.1 135 221 615 701 608 703 0.94

Sequence Information

Coding Sequence
ATGTGTTTAGTCATGTGTGGGGTATGGGATCCTTTCCTCGTCCGGGCGACCAGTCACTGGAAAATGTACACTCCAAGTATTCAAGCAAAGAGACGCACCGTGCTCACCAGTCAGCCGGACTCACCGCCGCCGTCGTTGCCGACGGCACCGCAAGCCCTACCGATGTCGCTGGCGACATCAAGCAGCCCCGACCAAGTGATCATACAAAATCATGGCTATCTGCCCACCTCAGCCGCCTCCCGGTACTTCGAGCATCCACTGAACATCTCGCCCAGCCAGACCGGGCAGAGCGACGACGATcaccaccagcagcaacagcaccaccagcacctgcagcaacagcagcagcagcaacaacaacagcagcaacagcaccatCATCATCTGGTGGCATCGCCGAATTCAGTGAACCTCGGCGCGCTGGGCAGCACGCACCAGGTCCATCAGGTGCAGAACGCCAACGGCAGCACCTCGTTCGTTTATGAATACTATAAAGTATCGGACAAGGACAATGACGAATTGCACTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACAcccatcatcaacatcatcggcGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCAGCAACAGCTGTTGTTGTAACCACCGATCAACAtcgccaacaacagcagcagcaacagcaacagcagcagcatcaaaCAATTAGCATTAAACGTGAACCAGAGGATCTGCGAAAGGATCCGAAATGCGGCAATAACGGTGCGGGTAACAGCAACAGTGGCAATGCCAAcaacggcggcggtggtggacACAGTCAAAAGGTACTAGTTGTTcaatcaccatcaccatcaatACAAATTAAAGAGCCACCACCCAGTCCTGGAAGCCCAACAAACGAAACAATGTACGCTGCCGGCGGCGGCACTCAAATTTACCTTCAGGGTCCACATCAGACAAGCACTTCTGTAACAGGTGGCACAAATGTGAACACACACAGTCCTAGCCCTGGACCCTACATCACACCGGACAACTATGGAATGTACACAACACGTCTCGCCACCGGACCAACATCGACATTCATCTCAGAGCCATATTATCGAGAGTATTTCGCCGCCGATGGACAGGGCTACGCACCCGCAACACGCACTGTTTATGGGGACAGTGATGGACCACAGCCTGGTACCACATACGAGGGACGCTTCACAACCGCACACACCAAGAATGGTACACCTGTCTATGCAAAAACTGTTACAGCGGCCGGCTTAACAGTGGATTTGCCAAGTCCCGATTCGGGAATCGGGGCCGATGCTATTACGCCGAGGGATCAAAATAATCTACAACAGTCATTCGATTACACGGAACTATGCCAGCCCGGTACGCTCCTAGACAGCAGTGGTGCAATACCAGTTTCAGTTAGTAGCATGCAACGAACTGTTAGCATTCATGGTGGTCAAAACAGTCCAACCACATCTTTGAGCGGCACACCAGGTACCCCGGGAACGACACGAACAAGGCCATGgcatgattttggacgacaaaGTGATGCGGATAAAATTCAAATACCAAAAATaTTCGTAAATGTAGGATTTAGATACCATCTAGAGAGTCCAATTAGTTCGTCACAACGAAGGGAAGACGACCGAATAACGTACATCAACAAGGGACAATTCTACGGCATCACATTGGAGTACATTCCCGATCCAGATAAACCCATCAAGAATACAACAGTTAAGATACGAAGAACTCGGTGGGTCTGGTCGGATGCATCGAGGAAGGTCTCACACAACGCTATTGCAGTCTATTGGAATCCGCTGGAGAGCTCTGCCAAGATCAATATTGCCGTTCAATGTCTAAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGGGTCTACCGCTGCACATACAAATTGACACATTTGAAGATCCCCGGGATACACAAGTTTTCCATCGAGGCTATTGCCAAATAAAAGTCTTCTGCGATAAGGGTGCTGAGCGCAAAACACGCGACGAAGAACGACGAGCGGCCAAACGCAAAATGACTGCCACCGGTAGGAAAAAGCTAGATGAGCTCTATCATCCTGTAACGGATCGTTCAGAATTTTATGCAATGCAAGATATAAGTAAACCGCCTGTTCTATTCTCCCCCGCCGATGACATGGACAAGACCTTCTATGGCCATGAGACTGATTCATTATCTGGTACACCAGACCTCAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTTGGCACCCCCACACTTAAATTTCACAATCATTTTCCACCAGACGTGCAGACTGATAAAAAAGATCACATTCTTGAACAGAGTTTAGTGTCTGGTTCAATGTCTGAATTTGGTCCACCATTAAAACGTGGCCGTATGTCACCACCGATAAGTGAACGTGTTATGCTCTATGTGCGACAAGAGAACGAGGATGTCTACACGCCATTGCATGTTGTGCCACCGACTACAATCGGACTTTTAAATGCGGAATTCGCCATGCTAGGGGACATTATTATTTATGAGGAAGGCTTAGCGATGTTCTTGTCTATCCATGACGCGGTAACACCTCCATGgaTTACTGCGAAAATTGATGATGATATGCTTTCGTACTACTGCAACGAAGACATATTTCTGCTAGAAGTGCAACAAGTTGAAGATGACCTTTACGATATAACTCTAACCGAGCTTCCCAATCATTGA
Protein Sequence
MCLVMCGVWDPFLVRATSHWKMYTPSIQAKRRTVLTSQPDSPPPSLPTAPQALPMSLATSSSPDQVIIQNHGYLPTSAASRYFEHPLNISPSQTGQSDDDHHQQQQHHQHLQQQQQQQQQQQQQHHHHLVASPNSVNLGALGSTHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQQQQQQHQTISIKREPEDLRKDPKCGNNGAGNSNSGNANNGGGGGHSQKVLVVQSPSPSIQIKEPPPSPGSPTNETMYAAGGGTQIYLQGPHQTSTSVTGGTNVNTHSPSPGPYITPDNYGMYTTRLATGPTSTFISEPYYREYFAADGQGYAPATRTVYGDSDGPQPGTTYEGRFTTAHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVSSMQRTVSIHGGQNSPTTSLSGTPGTPGTTRTRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPIKNTTVKIRRTRWVWSDASRKVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFSPADDMDKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPLKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAEFAMLGDIIIYEEGLAMFLSIHDAVTPPWITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976213;
90% Identity
-
80% Identity
-