Nint022089.1
Basic Information
- Insect
- Neoascia interrupta
- Gene Symbol
- grh
- Assembly
- GCA_947623515.1
- Location
- OX392462.1:5982670-6050640[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.37 6.7e+03 -2.9 0.8 17 37 128 148 116 172 0.49 2 4 0.62 1.1e+04 -3.6 0.1 76 102 243 269 229 299 0.61 3 4 1.1e-30 1.9e-26 93.7 0.1 24 148 562 681 547 685 0.91 4 4 0.0025 46 4.2 2.6 203 221 684 702 682 704 0.90
Sequence Information
- Coding Sequence
- ATGTCGCGAAATTTTCCACGCCAAAGCAATTATTCACCATCCCTGTTCAAGGACAATAATATCCTCTCACTGAAAATTATGATGATTAGCGCTGGCATCACTGGATACTTCCCACTTAACCCTGAAACAGAATTTAAACACTCACAAGGGAGACGAACTGTTCTCACCAGTCAGTCAGACTCGCCGCCACCATCGCTGCCATCGGCTCCACAGGCGCTACCCATGTCGCTGGCGACATCGGGCAGTCCTGATCAAGTGATTATACAAAACCATGGCTACTTACCGACGTCTACGGCTTCTAGGTACTTCGaacatccgctgaatatatcacctggtcaggcgggaaccaatgatgatgatcaccaccagcaacagcagcagcatcaacagcaccaccaacaacaacagcagcagcaacatcatcatcacttggtgtcatcgccgaattctgtgaatttgggtgcgctggccaacacgcaccaggttcatcaggtgcagAACGCGAACGGCAGTACCTCCTTCGTTTATGAGTACTACAAAGTGTCGGACAAGGACGGTGACGAATTGCACTGGAGTGCCCCCACTACATCAAACAAATTAAATGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGgttcacacccatcatcaacatcatcggcgtcaactacgacaacatcacaatcatcggtagctggcgcagcaacagctgttgttgtaaccaccgatcaacatcgtcagcagcaacagcagcatcagacaattagcattaaacgtgaacccgaggatctgcgaaaggatcccaaatgcggcaataacggtgcgaccaacaacaataataataacagtggcaacaataataacaacaacaacaacggcggtggtggacacagtcaaaagGTATTAGTTGTACAATCACCATCACCATCAATACAAATTAAAGAGCCACCACCCAGTCCTGGAAGTCCAACAAACGAAACAATGTACGCTGCCAGCGGCGGCACTCAGATTTACCTGCAGGGTCCACATCAGACAAGCACATCTGTAACAGGTGGCGCAAATGTGAATACACACAGCCCCAGTCCAGGGCCATATATCTCACCGGACAGCTATGGAATGTATACAACACGCCTTGCCACTGGACCTACATCGACATTCATCTCAGAGCCATATTATCGAGAGTATTTCGCTGCCGATGGACAGGGTGGCTATGCACCCGCAACACGCACAGTCTACGGTGATAGTGATGGACCACAACCCGGCACAACATACGAGGGTCGCTTCACAACATCACACACTAAGAATGGTACACCTGTCTATGCGAAAACTGTTACAGCGGCCGGCTTGACAGTGGATTTACCAAGTCCCGATTCGGGAATTGGCGCTGATGCCATTACGCCGAGGGATCAAAATAATCTTCAACAGTCATTCGATTACACGGAACTATGCCAGCCTGGTACTCTTTTAGACAGCAGCGGTGCAATACCAGTTTCAGTTAGTAGCATGCAACGAACTGTTAGCATTCATGGTGGTCAAAACAGTCCGACAACATCGCTAAGTGGTACGCCAGGGACACCAGGAACAACGCGATCAAGGCCATGGCATGATTTTGGACGACAAAGTGATGCGGATAAAATTCAAATACCAAAAATATTCGTAAATGTAGGATTTAGATACCATCTAGAGAGTCCGATCAGCTCGTCGCAACGACGAGAAGACGATCGAATAACGTACATCAACAAAGGACAATTCTATGGCATCACATTGGAGTATATTCCCGATCAGGATAAGCCCATCAAGAACACCACAGTAAAGAGTGTAATCATGTTAATGTTCCGAGAAGAGAAGAGCCCCGAAGATGAAATCAAAGCTTGGCAATTCTGGCATAGTAGACAACATTCTGTGAAACAGAGAATACTAGATGCTGATACGAAAAACTCAGTTGGACTTGTGGGCTGTATCGAAGAGGTCTCACACAATGCCATCGCGGTCTATTGGAATCCACTGGAAAGTTCTGCTAAAGGTGCTGAGCGCAAAACACGCGATGAAGAACGAAGAGCGGCCAAGCGCAAAATGACAGCTACTGGCAGGAAAAAGCTTGATGAACTCTACCATCCTGTAACAGATCGTTCAGAATTCTATGCAATGCAAGATATTAGTAAACCACCTGTACTATTCTCCCCCGCCGATGACATGGAAAAGACCTTCTATGGCCATGAGACTGATTCATTATCCGGTACGCCAGACCTTAAAGGCGCATCACCGTTTCTACTGCATGGACAAAAAGTCGGTACACCCACACTCAAATTCCACAATCATTTTCCACCTGACGTGCAGACTGACAAAAAAGATCACATTTTGGAACAGAGTTTAGTCTCTGGTTCAATGTCAGAGTTTGGTCCACCAATCAAACGTGGCCGTATGTCACCGCCGATAAGTGAACGTGTCATGCTGTATGTGCGACAAGAGAACGAAGATGTCTACACGCCATTGCATGTTGTGCCACCGACTACCATCGGACTTTTGAATGCGATCGAAAATAAATACAAAATCTCCACATCAAGTATAAATAATATTTATCGTACAAATAAAAAGGGGATTACTGCGAAAATTGACGATGACATGCTCTCGTATTACTGCAATGAAGACATATTCCTGCTAGAGGTGCAGCAAGTTGAAGACGACCTATACGACATAACCCTGACCGAGCTTCCCAATCATTGA
- Protein Sequence
- MSRNFPRQSNYSPSLFKDNNILSLKIMMISAGITGYFPLNPETEFKHSQGRRTVLTSQSDSPPPSLPSAPQALPMSLATSGSPDQVIIQNHGYLPTSTASRYFEHPLNISPGQAGTNDDDHHQQQQQHQQHHQQQQQQQHHHHLVSSPNSVNLGALANTHQVHQVQNANGSTSFVYEYYKVSDKDGDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQHQTISIKREPEDLRKDPKCGNNGATNNNNNNSGNNNNNNNNGGGGHSQKVLVVQSPSPSIQIKEPPPSPGSPTNETMYAASGGTQIYLQGPHQTSTSVTGGANVNTHSPSPGPYISPDSYGMYTTRLATGPTSTFISEPYYREYFAADGQGGYAPATRTVYGDSDGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVSSMQRTVSIHGGQNSPTTSLSGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFSPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976213;
- 90% Identity
- iTF_01116212;
- 80% Identity
- -