Basic Information

Gene Symbol
grh
Assembly
GCA_948107695.1
Location
OX403618.1:90414539-90491989[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.15 1.8e+03 -1.6 3.8 4 40 113 149 105 161 0.61
2 2 1.2e-63 1.4e-59 201.4 0.3 24 221 558 750 543 752 0.93

Sequence Information

Coding Sequence
ATGTACCATCGGACAACATATCACTGCCGACTACCCTTCACAGCAGCAGTGTTGTTGTTGTGTGTTAAACAGTCCGATCGGCCATCACCATCATCATTGGACAGGAGACGAACGGTACTAACTAGCCAAGCTGATTCACCACCACCATCATTGCCATCAGCACCACAGGCACTGCCAATGTCGCTGGCGACATCTAGCAGTCCTGATCAAGTGATCATCCAAAATCATAGTTACCTTCCCACGTCTTCTGCTGCAAGGTACTTTGagcacccgctgaatatttcgcctggccaaacggtgtcaaacgacgatgatcaccaccagcagcagcagcaacaacagcagcaacaacagcatcaccaacatcaccagcagcaacaacaacaacaacaacatcagcagcagcaacagcatcatcatcatttggtaccatcaccgacttcggtgaatttgggcgcccTGTCCAACTCACACCAGGTCCATCAGGTGCAGAATGCCAATGGAAGCACGTCGTTTGTTTACGAATACTACAAAGTATCGGACAAGGACAATGACGAATTGCATTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACACCcatcatcaacatcatcggcgtcaactacgacaacatcacaatcatcggtagctggcgctgcaacagctgttgttgtaaccaccgatcaacatcgccaacaacagcaacagcagcatcaggcaattagcattaaacgtgaacccgaagatctgcgaaaggatcccaaatgtggcaataacggtgctggcaacaataacaacaacaacaacagtagcaatggcaacGGAACTGGTGGACACAGTCAAAAGGTATTAGTTGTACAATCACCTACGCCATCAATACAAATTAAAGATCCACCACCCAGTCCTGGAAGTCCAACAAACGAAACAATGTACGCTGCCAGCGGCGGCACTCAAATTTACCTTCAGGGTCCACATCAGACAGGTTCTTCTGTAACAGGTGGATCAAATGTTAACACACACAGCCCCAGCCCTGGACCATATATCTCACCGGATAGCTATGGAATGTACACAACTCGACTTGCCACCGGACCAAATTCCACATTCATCTCAGAGCCATATTATCGTGAATATTTTGCTTCAGATGGACAAGGTGGCTATGCGCCCGCAACACGCACCGTTTATGGTGATAGTGAGGGACCACAACCGGGTACAACCTATGAGGGTCGATTCACAACATCACACACTAAAAATGGTACACCTGTCTATGCAAAAACTGTTACAGCAGCCGGCCTCACAGTGGATTTGCCAAGTCCTGATTCGGGAATTGGTGCTGATGCTATTACGCCGAGGGATCAAAATAATCTGCAACAGTCATTCGATTACACGGAACTATGTCAGCCTGGTACATTATTAGACAGCAGCGGTGCAATACCAGTTTCAGTTAGTAGCATGCAACGTGCTGTTAGCATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAGTGGTGGTACACCAGGGACACCAGGAACGACACGATCAAGGCCATGGCATGATTTTGGTCGGCAAAGTGATGCCGATAAAATTCAAATACCAAAAATATTCGTAAATGTAGGATTTAGATATCATCTAGAAAGTCCGATTAGTTCGTCACAACGACGAGAAGACGATCGAATAACATACATCAATAAAGGACAATTTTATGGCATCACATTGGAATACATTCCAGACCAAGATAAACCAATAAAAAATACCACAGTTAAGAGTGTAATCATGTTAATGTTCCGAGAAGAGAAAAGTCCCGAAGATGAAATCAAAGCCTGGCAATTTTGGCATAGTAGACAACATTCTGTCAAACAGAGAATACTAGATGCTGATACGAAAAATTCCGTTGGTCTTGTAGGATGTATCGAAGAAGTTTCACATAATGCTATTGCAGTTTATTGGAATCCATTGGAAAGTTCTGCAAAGATCAATATTGCCGTTCAGTGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGGGTCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGGGATACACAAGTTTTCCATCGAGGCTACTGCCAAATAAAAGTCTTCTGCGATAAGGGTGCTGAGCGCAAAACAAGAGATGAAGAAAGAAGAGCGGCAAAACGTAAAATGACAGCAACAGGAAGGAAAAAGCTCGACGAGCTTTATCATCCTGTAACAGATCGTTCAGAATTTTATGCAATGCAAGACATAAGCAAACCGCCTGTACTATTTACCCCCGCCGATGACATGGAAAAGACCTTCTATGGCCATGAGACTGATTCATTATCTGGTACACCAGATCTTAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTCGGTACCCCAACATTAAAATTCCACAATCATTTTCCGCCCGATGTGCAGACTGATAAAAAAGACCATATTCTTGAACAAAGTTTAGTTTCTGGTTCAATGTCAGAATTTGGCGGTCCACCAATTAAACGTGGCCGTATGTCACCTCCAATAAGTGAACGTGTGATGCTTTATGTGCGACAAGAAAACGAAGATGTTTATACGCCATTGCATGTTGTGCCACCGACGACAATCGGACTTTTAAATGCGATCGAAAATAAATACAAAATCTCCACATCAAGTATAAATAATATTTATCGTACAAATAAAAAGGGGATTACTGCGAAAATTGATGACGATATGTTATCATATTATTGCAACGAAGACATATTCCTGCTAGAAGTGCAACAAGTTGAAGATGACCTATATGATATAACCCTGACCGAGCTTCCAAATCATTGA
Protein Sequence
MYHRTTYHCRLPFTAAVLLLCVKQSDRPSPSSLDRRRTVLTSQADSPPPSLPSAPQALPMSLATSSSPDQVIIQNHSYLPTSSAARYFEHPLNISPGQTVSNDDDHHQQQQQQQQQQQHHQHHQQQQQQQQHQQQQQHHHHLVPSPTSVNLGALSNSHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNNNNNSSNGNGTGGHSQKVLVVQSPTPSIQIKDPPPSPGSPTNETMYAASGGTQIYLQGPHQTGSSVTGGSNVNTHSPSPGPYISPDSYGMYTTRLATGPNSTFISEPYYREYFASDGQGGYAPATRTVYGDSEGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSSGAIPVSVSSMQRAVSIHGGQNSPTTSLSGGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFTPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976213;
90% Identity
iTF_01116212;
80% Identity
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