Svit023165.1
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- grh
- Assembly
- GCA_958431115.1
- Location
- OY288109.1:105655099-105718922[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 2.7e+03 -1.5 4.3 6 40 106 140 96 158 0.68 2 3 0.81 1.5e+04 -4.0 0.1 83 96 240 253 220 267 0.48 3 3 1.2e-63 2.3e-59 201.5 0.3 24 221 553 745 538 747 0.93
Sequence Information
- Coding Sequence
- ATGGATGAAGTAGCTGACCAGCAACAGCCAACAACAGCAGCTGCATCAGCGTCAACATCAACAGGTAGAACGCGgaGACGAACGGTATTAACAAGCCAAGCTGATTCACCACCACCATCATTGCCATCAGCACCACAGGCACTGCCAATGTCGCTGGCGACATCTAGCAGTCCTGATCAAGTGATTATCCAAAATCATAGCTACCTTCCCACGTCCTCTGCTTCAAGATACTTTGAGCACCCGCTGAATATTTCGCCCGGCCATACAGTGCCGAATGACGATGATCACcaccagcagcaacagcaacaacagcatcaCCAACatcaccagcagcagcaacagcaacagcaacaacaacaacatcatcagcagcagcaacaacagaaTCATCATCATTTAGTACCATCACCGACTTCGGTGAATTTGGGCGCACTGTCCAACTCACACCAGGTCCATCAGGTGCAGAATGCGAATGGCAGCACGTCATTTGTTTACGAATACTACAAAGTATCGGACAAGGACAATGACGAATTGCATTGGagTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACacccatcatcaacatcatcggcGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCTGCAACAGCTGTTGTTGTAACCACCGATCAACATcgccaacaacaacagcagcagcagcaacagcatcaaGCAATTAGCATTAAACGTGAACCCGAAGATCTGCGAAAGGATCCAAAATGCGGCAATAACGGTGCTggcaacaataataacaacaacaacaacattagcAATGGCAACGGCGCTGGTGGACACAGTCAAAAGgtattaGTTGTACAATCACCAACGCCATCAATACAAATTAAAGATCCACCACCCAGTCCTGGAAGCCCAACAAACGAAACCATGTACGCTGCCGGTGGCAGCACCCAAATTTACCTTCAGGGCCCACACCAGACAGGTTCTTCTGTAACAGGTGGATCAAATGTTAACACACACAGCCCCAGCCCTGGACCATATATCTCACCGGATAGCTATGGAATGTACACAACCCGTCTTGCCACCGGACCCAATTCCACATTCATCTCAGAGCCATATTATCGTGAATATTTCGCCTCCGATGGACAAGGCGGCTATGCACCCGCAACACGCACAGTCTATGGTGATAGCGAGGGACCACAACCGGGTACAACCTATGAGGGCCGATTCACAACATCACACACTAAAAATGGTACACCTGTCTATGCAAAAACTGTTACAGCAGCCGGCCTCACAGTGGACTTACCAAGTCCCGATTCGGGAATTGGTGCTGATGCCATAACGCCGAGGGATCAAAATGCTCTACAACAGTCATTCGATTACACGGAACTATGTCAGCCTGGTACATTATTGGACAGCAGCGGTGCAATACCAGTTTCAGTTACTAGCATGCAACGTGCTGTTAGTATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAGTGGTGGTACACCAGGGACACCAGGAACGACACGATCAAGGCCATGGCATGATTTTGGTCGGCAAAGTGATGCGGATAAAATTCAAATAccaaaaatattcgtAAATGTAGGATTTAGATATCATCTAGAAAGTCCGATTAGTTCGTCACAACGACGAGAAGATGATCGAATAACATACATCAATAAAGGACAATTTTATGGCATCACATTGGAATATATTCCAGACCAAGATAAACCAATCAAAAATACCACAGTTAAGagtGTAATCATGTTAATGTTCCGAGAAGAAAAAAGTCCCGAAGATGAAATTAAAGCCTGGCAATTTTGGCATAGTAGACAACATTCTGTTAAACAGAGAATACTAGATGCTGataCGAAAAATTCCGTTGGTCTTGTAGGATGTATTGAAGAAGTTTCACATAATGCTATTGCAGTTTATTGGAATCCCTTGGAAAGTTCAGCAAagatcaATATTGCCGTTCAGTGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGggtCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGGGATACACAAGTTTTCCATCGAGGCTATTGCCAAATAAAAGTCTTCTGCGATAAGggtGCTGAGCGCAAAACACGAGATGAAGAAAGAAGAGCGGCCAAGCGTAAAATGACCGCAACAGGAAGGAAAAAGCTCGATGAGCTTTATCATCCTGTAACAGATCGTTCAGAATTTTATGCAATGCAAGATATAAGCAAACCACCTGTTCTATTTACCCCCGCCGATGACATGGAAAAgACCTTCTATGGCCATGAGACTGATTCATTATCTGGTACACCAGATCTTAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTCGGTACCCCAACATTAAAATTTCACAATCATTTTCCGCCCGATGTGCAGACtGATAAAAAAGATCATATTCTTGAACAAAGTTTAGTTTCTGGTTCAATGTCTGAATTTGGTCCACCAATTAAACGTGGCCGTATGTCACCTCCGATAAGTGAACGTGTGATGCTTTATGTGCGACAAGAAAACGAAGATGTTTATACGCCATTGCATGTTGTGCCACCGACGACAATCGGACTTTTGAATGCGatcgaaaataaatacaaaatctcCACATCaagtataaataatatttatcgaACAAATAAAAAGGGGATTACTGCGAAAATTGATGATGATATGTTATCATATTATTGCAATGAAGATATATTCCTGCTAGAAGTGCAACAAGTTGAAGATGACCTATATGATATAACCCTGACCGAGCTTCCAAATCATTGA
- Protein Sequence
- MDEVADQQQPTTAAASASTSTGRTRRRTVLTSQADSPPPSLPSAPQALPMSLATSSSPDQVIIQNHSYLPTSSASRYFEHPLNISPGHTVPNDDDHHQQQQQQQHHQHHQQQQQQQQQQQHHQQQQQQNHHHLVPSPTSVNLGALSNSHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNNNNNNISNGNGAGGHSQKVLVVQSPTPSIQIKDPPPSPGSPTNETMYAAGGSTQIYLQGPHQTGSSVTGGSNVNTHSPSPGPYISPDSYGMYTTRLATGPNSTFISEPYYREYFASDGQGGYAPATRTVYGDSEGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNALQQSFDYTELCQPGTLLDSSGAIPVSVTSMQRAVSIHGGQNSPTTSLSGGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFTPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976213;
- 90% Identity
- iTF_01116212;
- 80% Identity
- -