Basic Information

Gene Symbol
grh
Assembly
GCA_947049305.1
Location
CAMRIP010000132.1:37401-144275[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.45 7.2e+03 -3.2 4.2 4 40 179 215 171 230 0.59
2 2 1.3e-63 2.2e-59 201.3 0.3 24 221 625 817 610 819 0.93

Sequence Information

Coding Sequence
ATGGCCTCAGTCAACCAGCCAGCTATCCAGCCAGAGTTGGACAGAATATTTGCTGTTGTCGTTGTGAGTTCACTGATGGATATTGTTGATGGCATTATAAATGGTTTTTTCTACGAAGATGGTGCGATCGATTGGTCAGCACCAGCATCTGGACGGATGATGGTCTGGCTGACCAAATTAGTTTGCTTCATCGCACCTTATTCGGAAAGTGTCTCATTATTCAAGCATCCGACGAGCAAATTAGGCAGAAATGAAGTCGATGACGATGAAGATCACGAAGAAGAAGATCCAAATAAATATCCTTTCGGACAAGGCCAAGCTGATTCACCACCACCATCATTGCCATCAGCACCACAGGCACTGCCAATGTCGCTGGCGACATCTAGCAGTCCTGATCAAGTGATTATCCAAAATCATAGCTACCTTCCTACGTCCTCGGCTTCAAGGTACTTTGAGCACCCGCTGAACATCTCGCCTGGTCAAACGGTGCCCAATGACGATGATCACcaccagcagcaacaacaacagcagcaacagcaacaacagcaacaacaacaacagcatcaCCAACAtcaccagcagcagcagcaacatccACATCAACAgcagcatcatcatcatatgGTACCATCACCGACTTCGGTGAATTTGGGCGCACTGTCCAACTCACACCAGGTCCATCAGGTGCAGAATGCGAATGGTAGCACGTCGTTTGTTTACGAATACTACAAAGTATCGGACAAGGACAATGACGAATTGCATTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACAcccatcatcaacatcatcggCGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCTGCAACAGCTGTTGTTGTAACCACCGATCAACATCgccaacaacagcaacagcagcatcAGGCAATTAGCATTAAACGTGAACCCGAAGATCTGCGAAAGGATCCCAAATGCGGCAATAACGGTGCTggtaacaataataacaacaacaacagtagCAATGGCAACGGCGCTGGTGGACACAGTCAAAAGgtattaGTTGTACAATCACCTACGCCATCAATACAAATTAAAGATCCACCACCCAGTCCTGGAAGTCCAACAAACGAAACCATGTATGCTGCCGGTGGCAGCACCCAAATTTACCTACAGGGTCCACACCAGACAGGTTCTTCTGTAACAGGTGGATCAAATGTTAACACACACAGCCCCAGCCCTGGACCATATATCTCACCGGATAGCTATGGAATGTACACAACCCGACTTGCCACAACCGGACCGAATTCCACATTCATATCAGAGCCATATTATCGTGAATACTTTGCTAGTGATGGACAAGGTGGCTATGCGCCCGCAACACGCACCGTCTATGGCGATAGTGAGGGACCACAACCGGGTACAACCTATGAGGGCCGCTTCACAACATCACACACTAAAAATGGTACACCTGTCTATGCAAAAACTGTTACAGCAGCCGGCCTCACAGTGGATTTACCAAGTCCCGATTCGGGAATTGGTGCCGATGCTATTACGCCGAGGGATCAAACAAATCTACAACAGTCATTCGATTACACGGAACTATGTCAGCCTGGTACATTATTAGACAGCAGCGGTGCAATACCAGTTTCAGTAACAAGCATGCAACGTGCTGTTAGTATTCATGGTGGTCAAAATAGTCCAACAACATCGTTGAATGGTGGTACACCAGGGACACCAGGAACGACACGATCAAGGCCATGGCATGATTTTGGTCGGCAAAGTGATGCGGataaaattcaaataccaaaaatatTCGTAAATGTAGGATTTAGATATCATCTAGAAAGTCCGATTAGTTCGTCACAACGACGAGAAGACGATCGAATAACATACATCAATAAAGGACAATTTTATGGCATCACATTGGAATACATTCCAGACCAAGATAAACCAATCAAAAATACCACAGTTAAGagTGTAATCATGTTAATGTTCCGAGAGGAAAAAAGTCCCGAAGATGAAATCAAAGCCTGGCAATTTTGGCATAGTAGACAACATTCTGTTAAACAGAGAATACTAGATGCTGatacgaaaaattCCGTTGGTCTTGTAGGATGTATTGAAGAAGTCTCACATAATGCTATTGCAGTTTATTGGAATCCTTTGGAAAGTTCTGCaaagatcaATATTGCCGTTCAGTGCCTGAGTACGGATTTCAGTAGCCAGAAAGGTGTAAAGggTCTACCACTGCATGTACAAATTGACACATTTGAGGATCCACGGGATACACAAGTTTTTCATCGAGGATATTGCCAAATAAAAGTCTTCTGCGATAAGggtgCTGAGCGCAAAACACGAGATGAAGAAAGAAGAGCGGCCAAACGTAAAATGACCGCAACAGGAAGGAAAAAGCTCGATGAGCTTTACCATCCTGTAACAGATCGTTCAGAATTTTATGCAATGCAAGACATAAGCAAACCACCTGTACTATTTACCCCCGCCGATGACATGGAAAAgACCTTCTATGGCCATGAGACTGATTCATTATCTGGAACACCAGATCTTAAAGGTGCATCACCGTTTCTACTGCATGGACAAAAAGTCGGTACCCCAACATTAAAATTCCACAATCATTTTCCGCCCGATGTGCAGACtgaTAAAAAAGACCACATTCTTGAACAAAGTTTAGTTTCTGGTTCAATGTCTGAATTTGGTCCACCAATTAAACGTGGCCGTATGTCACCTCCGATAAGTGAACGTGTGATGCTTTATGTGCGACAAGAAAACGAAGATGTTTATACGCCATTGCATGTTGTGCCACCGACGACAATCGGACTTTTAAATGCGAtcgaaaataaatacaaaatctcCACATCaagtataaataatatttatcgtACAAATAAAAAGGGGATTACTGCGAAAATTGATGATGATATGTTATCATATTACTGCAACGAAGACATATTCCTGCTAGAAGTGCAACAAGTTGAAGATGACCTATATGATATAACCTTGACCGAGCTTCCAAATCATTGA
Protein Sequence
MASVNQPAIQPELDRIFAVVVVSSLMDIVDGIINGFFYEDGAIDWSAPASGRMMVWLTKLVCFIAPYSESVSLFKHPTSKLGRNEVDDDEDHEEEDPNKYPFGQGQADSPPPSLPSAPQALPMSLATSSSPDQVIIQNHSYLPTSSASRYFEHPLNISPGQTVPNDDDHHQQQQQQQQQQQQQQQQQHHQHHQQQQQHPHQQQHHHHMVPSPTSVNLGALSNSHQVHQVQNANGSTSFVYEYYKVSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQHQAISIKREPEDLRKDPKCGNNGAGNNNNNNNSSNGNGAGGHSQKVLVVQSPTPSIQIKDPPPSPGSPTNETMYAAGGSTQIYLQGPHQTGSSVTGGSNVNTHSPSPGPYISPDSYGMYTTRLATTGPNSTFISEPYYREYFASDGQGGYAPATRTVYGDSEGPQPGTTYEGRFTTSHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQTNLQQSFDYTELCQPGTLLDSSGAIPVSVTSMQRAVSIHGGQNSPTTSLNGGTPGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDQDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYAMQDISKPPVLFTPADDMEKTFYGHETDSLSGTPDLKGASPFLLHGQKVGTPTLKFHNHFPPDVQTDKKDHILEQSLVSGSMSEFGPPIKRGRMSPPISERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQVEDDLYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976213;
90% Identity
iTF_01116212;
80% Identity
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