Msac003061.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002803265.2
- Location
- NW:574934-613554[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-17 5.1e-14 51.1 0.0 1 39 375 414 375 418 0.94 2 2 1.8e-18 1.4e-15 56.1 0.0 1 43 943 986 943 988 0.95
Sequence Information
- Coding Sequence
- ATGCAGTTGCAGCGCCGCACGGCCGTCGGATGCGGCCCGTGCCCGGCTGCGGCGCACGACCGTCAAGCGGTTAGGAAACACTTGCGCCGGTGGTCACACAACATGGTGCTCATCATCGGGTTGGAAAGGATCGCTGAAGAGTTAATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTTggcgaaaaattatttactagaaGAGGAATTAATGGATCGGAGAGAATGGGTTCCCGTCAAAACGTTTAATTCATGTGATGTGAACACAGACCTGAGTATAGCGGATCACTCACCTGCAGAACTGGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGAGAGTCCGGAACCGGAACCGGGCAGGCGGTCGTGTTCCATACCGCCGACGGCGGCATCAGAGCCGTGTTGCGCCGATGATCGGTCGCCACCACCACCGCCACTGCTATTGTGCCTCCAACCCCACGGcgctgccgccgccgcaaTGGCCGCGGTCGCGTCAATGAACAactcgtcgtcgtcatcgtccaCGACGACGATGACACCGGCTGGCGGGCCACCGTCGCCCACCGCGCTTGAGGCCGCGGCCGCCGGCCTGCCGAAATGGCTTTTGGCCGCCGCCACGCTGAGGCTGCAAGAGACGACGGCCgctgcggcggcggcagcagcCGCGGCCGCGGCCGCGACGTCGGCGACCACCGGCTGCAAGTCGCCTCCCGCCCACCGTCACAACAatcagcagcagcaacaacaacaccAGTCGCTCGATCAACCGCTTGATCTCAGCGCCAagagcaacaacaacaacaacgtcAGCGGCAACGCTTCGTCGTCGTCCACGCCGTCGTGTCCGAGCTCGACGTCTACGCCGTCGTCCGAGCTGAAAAACGTGCCAGCCACCGTCGCTCCCGCCGTCGCCATCAACCCGTTCACGTCAGATCTCATCGCCACGGACATGGTGAACCAGCTGCGCGACCTGTTACCTAGCACGTCCACGTTCCTACCGCACCCAACGCTCAATGTGCCCATGGTAACCCCCAACAACCGGAACGCGCTTAAATCGAGGACGGTGAAACAGCCGAGTCACATTGCCGGCCGGAAGACTTACACAGAGGACGAGTTGCAAAAAGCGCTTCGAGACATCCAGAGCGGCAAGTTGGGCACAAGGCGGGCGGCCGTCATATACGGCATACCCAGGTCGACGTTGCGGAACAAGGTGTACAAGATGGCGCTGGAACGGGACAGCGCCGGCGGCGGCGCTGGCGGCGGAGTGGCCGTCAGGGACGCGTCGGCGGTCGGAGACGACCCGTCCAACGGACAGACCGCCGAGATGATGCCGATGCTGGTCgaggacgacgacgacgaggaCAGGGAAACGGCGTCGGTCGAAGACGAATGCACGAACAGAGCGACGGCGGACGGCAAGGACCACCACCACGCGCCACACCAACAACAacaaccgccgccgccgccgcagcaCCGCGGCCAACAGCCCAGGACGCCGTCGTCGTACATGACGGTCGAAGACTTGTTGCGGATCACGGCGGAACAACAGCAGCAGGCGGCCGCGACCATGCCCAACGCCGAGACGCTCCGGCTGTTCCTGCAGCATTACGCCAACAACAAACTGCTGCACAACAGACCGGAGTCGCATTATCGGGGACGCGACGTACCGGTGGACGGCCGATCGCCATCGCCGCCgtccaccgccgccgccgccgccgccgctacGGCCGCCACCAGGTTTCCGCTGCCCATAACTGCGGATCTATGGCCGGCGGCTGCAGCCGCTGCAGCAGCGGCGGCGGCCTTGGACCCTCAACACATGGGAACGTATCTGTCGCACTTGTTGTCCTCGTCGGTGGTGGCCGCGTCGCCTACGGCCGGATTGAGGTCGCCGCACTTGCAATCTCATGGCAGTCCACCAcctccaccgccgccgccaccatcgcagcagcaacagcagcacATGTCAGTGGCTCACCACCAGCAAGAATTATTCAAAGACTTCACCGTCAAGGACTTGATGCGCAAAATACTGGACGAagaacagcagcagcagctaCAGCACTTGCAACAGTACGGCAACAAATTGGTAGACCCTAGACAGTGGTCGTCGAACGGTTGCAGTTCATCTGAACCGATGGACACGGGTCGCAGCAACGACGACGATTCGAACCCGTCCAACGTCATCCTGAGAATACCGTCTTACAAGCCAGTTCCCGGTGGTAAGGGTGGCGATTTTGAGTCGGTGGCGTGCGCCAAAGACATCTCGTCTCCTGGGCGAACCAACAGTGTCAGAAGCGATTCGTCGTCGCCACCGTCGTCGTCCGGCGGTGGTGTTGGTGGTAAACATTCGGCCAACCTAAGAGACGTGATCGCCAAGAATATCACGAAAAGGTTCCAATCCGATCCCTCGCTCCCACCGCCCATACCAGCCGTCGAATCGTTCGCTCGAGCCTATCAACAGTACCAACAACAACACCACCATCATcatcaacaacaacaacaccaTCATCATCTACAGCAACATGGCATATCCACTTCCTTCGGTACCGGAAACTCCGTCATTAGGAAccataacaacaataatttgcAGCAGGATGATTGTCGGAAACGAGTACCGACGCCTACCAACAAATCATCGTCGGTTATAACGTCTTCGTCCGCTGGCGCTGGCTTCCACACGAGTAGCTCCTCATCGTCGTCTTCCAACTCGGCATCagctgcggcggcggcggctgctGCTGCGGCTGCGGCAGCTGCCGGTGGCAAGGGCACCAGGCCCAAGCGAGGCAAATACCGAAACTATGACCGGGACAGTCTAGTAGAAGCTGTGCGAGCGGTGCAGCGGGGTGAAATGAGCGTGCACCGGGCTGGATCTTATTACGGCGTGCCACACTCTACGCTCGAGTACAAGGTCAAGGAGAGACATCTGATGCGGCCCAGGAAACGGGAGCCTAAGAACCCTCCGTCCTCATCGTCAGTGTCCGCAGCAGTTGTCGCCGACCAGCATTCAGATCGGAAAAAGTCATCGTCCGATCTTTCGTCGGTCGTCCGGCCAATTGACAAGACGACTACTACCTCGTCTTCCTCGTCTTCTGCCACTCCGCCATCTATTAAAATGCCCGCGCACGTCCAGTTTTCGGCGCAACAACAACCGTCATCGATTCAGACACCTAATGGGCTCAAAATGTTTGACGCCGCAAGCCCGGTGGGACCGTATCAGCCATCGTTCCCGTTTTGGGCCCCAAACCCGTTCCACATGCCTATGGAGTTCCAGCGTAATCCGGTGGCGTTCCCACCGATGTCGATGATGCAACGGATGCAAGCTGAGTCACGGTTACACCACCACCAGGCCGCAGCCGTGGCTGCTGCATCCATCGCCAGTTTGGGAAAAAACGCCCGCGAGGTAGCTGAAAACCTATATGACGGAACGGACAATGGCAGCTTCCTGGACGGTATCATCAGGTCCAGTCTGGAAACGGGACTTAAGTCAGCGGCTACTATGGCGGCAGTCCAAGCGGCTGCTAAAAACGCTATGAAGGGAGATGGAGGATGTAGAGATGGCAGTGGCGGCGACAACTGCAGTCCGGAAGGTTCACCGCAAGTAGCTGGGGCCGAAGACGACGGAAAAGACCATTTGGAAGACCGAGCAGCCACGCCACCATCATGTCAGGACTCAGCTGCGAACAGCGAAGACGAGAAGTCTCCGGACGAACAGGAACACCGTCATCAGCAGCAAGACGATTCCGAACACGAAACAGTCGCTGATCGGGCGTCCACTGCTTCACCCGAACGCGCAATCGAAACGgaaaacgacgacgacgatatcGCCGACGCAGTTTGA
- Protein Sequence
- MQLQRRTAVGCGPCPAAAHDRQAVRKHLRRWSHNMVLIIGLERIAEELMGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTFNSCDVNTDLSIADHSPAELEPSSETGSLSGGSRSAESPEPEPGRRSCSIPPTAASEPCCADDRSPPPPPLLLCLQPHGAAAAAMAAVASMNNSSSSSSTTTMTPAGGPPSPTALEAAAAGLPKWLLAAATLRLQETTAAAAAAAAAAAAATSATTGCKSPPAHRHNNQQQQQQHQSLDQPLDLSAKSNNNNNVSGNASSSSTPSCPSSTSTPSSELKNVPATVAPAVAINPFTSDLIATDMVNQLRDLLPSTSTFLPHPTLNVPMVTPNNRNALKSRTVKQPSHIAGRKTYTEDELQKALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKMALERDSAGGGAGGGVAVRDASAVGDDPSNGQTAEMMPMLVEDDDDEDRETASVEDECTNRATADGKDHHHAPHQQQQPPPPPQHRGQQPRTPSSYMTVEDLLRITAEQQQQAAATMPNAETLRLFLQHYANNKLLHNRPESHYRGRDVPVDGRSPSPPSTAAAAAAATAATRFPLPITADLWPAAAAAAAAAAALDPQHMGTYLSHLLSSSVVAASPTAGLRSPHLQSHGSPPPPPPPPPSQQQQQHMSVAHHQQELFKDFTVKDLMRKILDEEQQQQLQHLQQYGNKLVDPRQWSSNGCSSSEPMDTGRSNDDDSNPSNVILRIPSYKPVPGGKGGDFESVACAKDISSPGRTNSVRSDSSSPPSSSGGGVGGKHSANLRDVIAKNITKRFQSDPSLPPPIPAVESFARAYQQYQQQHHHHHQQQQHHHHLQQHGISTSFGTGNSVIRNHNNNNLQQDDCRKRVPTPTNKSSSVITSSSAGAGFHTSSSSSSSSNSASAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPSSSSVSAAVVADQHSDRKKSSSDLSSVVRPIDKTTTTSSSSSSATPPSIKMPAHVQFSAQQQPSSIQTPNGLKMFDAASPVGPYQPSFPFWAPNPFHMPMEFQRNPVAFPPMSMMQRMQAESRLHHHQAAAVAAASIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAATMAAVQAAAKNAMKGDGGCRDGSGGDNCSPEGSPQVAGAEDDGKDHLEDRAATPPSCQDSAANSEDEKSPDEQEHRHQQQDDSEHETVADRASTASPERAIETENDDDDIADAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304773; iTF_01328521; iTF_01305459; iTF_01304098; iTF_00018927; iTF_01031862; iTF_01032791; iTF_00940282; iTF_01350202; iTF_00135227; iTF_00134147; iTF_01167515; iTF_00463264;
- 90% Identity
- -
- 80% Identity
- -