Agly011768.1
Basic Information
- Insect
- Aphis glycines
- Gene Symbol
- Mblk-1
- Assembly
- GCA_009928515.1
- Location
- scaffold:1834081-1872037[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-17 5.7e-14 51.7 0.0 1 40 384 424 384 428 0.94 2 2 2.5e-18 2.4e-15 56.1 0.0 1 43 951 994 951 996 0.95
Sequence Information
- Coding Sequence
- ATGCAGTTGCAGCGCCGCACGGCCGTCGGATGCGGCCCGTGCCCGGCCGGGGCGCACGACCGTCAGGCGGTCAGGAAACACTTGCGCCGGTGGTCACACAACATGGTGCTCATCATCGGATTGGAAAGGATCGCTGAAGAGTTAATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTTGGCGAAAAATTATTTACTGGAAGAAGAATTGATGGATCGGAGAGAATGGGTTCCCGTCAAAACGTGTAATTCGTGTGATGTGAACACAGACCTGAGTATAGCGGATCACTCACCTGCAGAACTGGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGAGAGTCCGGAACCGGAACCGGGCAGGCGGGCGTCGTCCACACCGCCGACGGCGGCATCAGAGCCGTGTTGCGCCGATGACCGATCGCCGCCGCCACCTCCACTGCTGTTGCTGCCCAATCCCACGGCCGCCGCCGCCGCCGCAATGGCCGCGGTCGCGTCACTGAACAACTCGTCGTCGTCATCGTCCACGACGACGATGACACCGGCCGGCGGGCCACCGTCGCCCGGCGCGCTGGAGGCCGCGGCCGCCGGCCTGCCGAAATGGCTGTTGGCCGCCGCCACGCTGAGGCTCCAAGAGACGACGGCCGCCGCGGCGGCTGCAGCAGCTGCGGCCGCGGCCGCGACTTCGGCGGCCACCGGTCGCAAGTCGCCTCCCGCCCACCGTCACCATCAACAACAACAACAACAACAACAACAAAACCAGTCGCTCGATCAACCGCTCGACCTCAGCGCCAAGAGCAACAACAACAACAACAACAACAACGTCAGCGGTTCGGGCGGTTCGTCGTCCGCGTCGTCCACGCCGTCGTGCCCGAGCTCGTCGTCCACGCCGTCGGCCGAGCTGAAAAACGTGCCGGCCACCGTCGCCGCCACCGTAGCCATCAACCCGTTCACGTCAGATCTCATCGCCTCGGACATGGTGAACCAGCTGCGCGACCTGTTACCGAACACGTCCACGTTCCTACCGCACCCTGCAACGCTCAACGTGCCCATGGTGAACACCAACAACCGGAACATGTTTAAGTCGAGACCGGGGAAACAGCCAAGTCATTTAGCCGGCCGGAAGACTTACACGGAGGACGAGTTGCAAAAGGCTCTGCGGGACATCCAGAGCGGCAAGTTGGGCACAAGACGGGCGGCCGTCATATACGGCATACCCAGGTCGACGTTGCGGAACAAGGTATACAAGTTGGCGCTGGAACGGGACAGCACCGGAAGTGGCGGTACTGCCGTTGGCGCTGGAGTAGCCATCAGGGACGCGTCGACCGTCGGAGACGATCCGTCCAACGGACAAGCCGCCGAAATGTTGCCGATGCTGGCCGACGACGACGACGACGAAGACAGGGAAACGGCGTCCGTCGAAGACGAATGCAGCACGAACAGGGCGACGGCGGACGGCAAGGACCACCACCACCAACACCATCACCACCACTCGGGACACCAACCACATCTGCCGCCACAGCATCGCGGCCAACAGCCCAGAACGCCGTCGTCGTCGTCGTCGTACATGACTGTCGAAGACTTGCTGCGAATTACGGCGGAACAACAGCAACAGGCGGCCGCGACCATGCCCAACGCCGAGACGCTCCGGATGTTCTTGCAGCATTACGCCAACAACAAACTGCTGCAAAACAGACCGGAAACGCATTACCGCGGCTCCGGACGCGACGTACCGGTAGACGGCCGTTCTCCATCGCCACCGCCCACAGCCGCCACCAGGTTTCCGCTTCCCATAACCGCGGACCTGTGGCCGGCGGCTGCGGCGGCCGCAGCGGCGGCGGCAGCCTTGGACCCTCAGCACATGGGAACGTATCTGTCACACTTGTTGTCCTCATCAGTGACGTCGCCCGCGGCCGGATTGGCGTCGCCGCACTTGCAATCGACTGGAAGTCCGCCGCCACCGCCACCGCCACCGCCGCAGCAACACGTGTCAGCGGCTCACCACCACCAGCAAGAATTCCTCAAAGACTTCACCGTCAAGGACTTGATGCGCAAAATATTGGATGAAGAGCAACAGCAACAGCTGCAGCAGTTGCAGCTACAGTACGGCAACAAACTGGTAGACGCCAGACGGTGGACGTCGAACGGTTGCAGTTCGTCCGAACCCATGGACACGGGTCGCAGTAACGACGACGACTCCAATCCGTCCAACGTCATCCTGAGAATACCTTCGTACAAGCCGGTTCCCGGCAGTAAGGGTGGCGATTACGAGTCGGCGGCCAGCGGCAGGGACGTCTCGTCTCCCGGCCGAGCCAACAGCGCCCGGAGCGATTCGTCGTCGCCCCCGTCGTCAACCGGTGGCGGAAAACATCCGGTAAACCTGAAAGACGTGATCGCCAAAAGCATCACGCACAGGTTCCAATCGGATCCGCCGCTCCCGCCGCCCATACCGGCCGTCGAGTCGTTCGCCCGGGCCTATCAACAGTACCAGCAGCAACACCACCATCACCAACAACAACAACACCATCATCATCTGCAGCAGCAACCGATCGGCATGTCCGCTTCCTTCGGTACCGGCAACTCTGTCATCAGGAACCATAACAACAACAATCTGCAGCAGGACGACTGCCGGAAACGAGTGCCGACGCCCACCAACAAATCGTCGTCGTCGGTCATAACGCCCTCGTCGGCCGGCGGCGGGTTCCACACCGGCGGCTCTTCGTCGTCGTCTTCCAACTCGGCGTCGGCCGCGGCCGCTGCGGCTGCGGCTGCTGCTGCGGCGGCGGCTGGTGGCAAGGGAACCAGGCCAAAGCGGGGCAAGTATCGAAACTACGACCGGGACAGCCTGGTGGAAGCCGTGCGAGCGGTGCAACGCGGCGAGATGAGCGTGCACCGGGCCGGGTCTTACTACGGAGTGCCACACTCCACGCTCGAGTACAAGGTCAAGGAGAGACATCTGATGCGGCCCAGGAAACGCGAGCCCAAGAACCCTCCGTCATCATCGTCGGTGTCCGCCGCCGTTGCCGACCATCACTCGGACCGGAAAAAGTCAACGTCCGATCTGTCGTCTTCGTCATCGTCGGCCGTCCGGCCGGCCGACAAGACCACCACCACCTCGTCGTCCTCGTCGTCCGCCACCCCGCCGGCTATCAAACTGCCCGCACACGTTCAGTTCCAGGCGGCGGCGGCGCAGCAACAGCCGTCGTCGCTTCCGACGCCCAACGGGCTGAAAATGTTCGACGCCGCGGGCGGCCCGGTGGGCCCGTACCAACCGTCGTTTCCGTTCTGGGCCCCGAGCCCGTTCCACGTTCCCATGGAGTTCCAGCGCAATCCCGTCACGTTCCCGCCGATGTCGATGATGCAACGGATGCAAGCCGAGTCGCGGCTGCACCATCACCAGGCCGCGGCCGTAGCCGCCGCGTCCATCGCAAGCCTGGGCAAAAACGCCCGCGAGGTGGCCGAAAATCTGTACGACGGGACGGACAACGGCAGCTTCCTGGACGGCATCATCAGGTCCAGTCTGGAGACGGGGCTCAAGTCGGCTGCCACCATGGCGGCCGTCCAAGCGGCCGCCAAGAACACCATGATGGGAGGTGGGGCAGGTAGAGACGGCGTCGGTAGTGGCGGCGACGACTGCAGTCCGGAAGGTTCGCCGCGAGCGGTTGGGCCCGAAGACGACGGCGAAGACCGACCGGCCTCGCCACCGTCGTGCCAGGACTCGGCCGCGGAAAGCGAAGACGAGAAGTCACGATTGGAGTCACCGGACGGACAGGAACATCGTCATCGTCATCGGCAGCACGACGATTCCGAACACGAAACGGTCGCCGACCGGGCGTCAACCGCGTCGCCCGAACGCGCCGCTACCGAAACAGAAAACGACGATGACGACATCGCCGACGCGGTCGTCTGA
- Protein Sequence
- MQLQRRTAVGCGPCPAGAHDRQAVRKHLRRWSHNMVLIIGLERIAEELMGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTCNSCDVNTDLSIADHSPAELEPSSETGSLSGGSRSAESPEPEPGRRASSTPPTAASEPCCADDRSPPPPPLLLLPNPTAAAAAAMAAVASLNNSSSSSSTTTMTPAGGPPSPGALEAAAAGLPKWLLAAATLRLQETTAAAAAAAAAAAAATSAATGRKSPPAHRHHQQQQQQQQQNQSLDQPLDLSAKSNNNNNNNNVSGSGGSSSASSTPSCPSSSSTPSAELKNVPATVAATVAINPFTSDLIASDMVNQLRDLLPNTSTFLPHPATLNVPMVNTNNRNMFKSRPGKQPSHLAGRKTYTEDELQKALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERDSTGSGGTAVGAGVAIRDASTVGDDPSNGQAAEMLPMLADDDDDEDRETASVEDECSTNRATADGKDHHHQHHHHHSGHQPHLPPQHRGQQPRTPSSSSSYMTVEDLLRITAEQQQQAAATMPNAETLRMFLQHYANNKLLQNRPETHYRGSGRDVPVDGRSPSPPPTAATRFPLPITADLWPAAAAAAAAAAALDPQHMGTYLSHLLSSSVTSPAAGLASPHLQSTGSPPPPPPPPPQQHVSAAHHHQQEFLKDFTVKDLMRKILDEEQQQQLQQLQLQYGNKLVDARRWTSNGCSSSEPMDTGRSNDDDSNPSNVILRIPSYKPVPGSKGGDYESAASGRDVSSPGRANSARSDSSSPPSSTGGGKHPVNLKDVIAKSITHRFQSDPPLPPPIPAVESFARAYQQYQQQHHHHQQQQHHHHLQQQPIGMSASFGTGNSVIRNHNNNNLQQDDCRKRVPTPTNKSSSSVITPSSAGGGFHTGGSSSSSSNSASAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPSSSSVSAAVADHHSDRKKSTSDLSSSSSSAVRPADKTTTTSSSSSSATPPAIKLPAHVQFQAAAAQQQPSSLPTPNGLKMFDAAGGPVGPYQPSFPFWAPSPFHVPMEFQRNPVTFPPMSMMQRMQAESRLHHHQAAAVAAASIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAATMAAVQAAAKNTMMGGGAGRDGVGSGGDDCSPEGSPRAVGPEDDGEDRPASPPSCQDSAAESEDEKSRLESPDGQEHRHRHRQHDDSEHETVADRASTASPERAATETENDDDDIADAVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972960;
- 90% Identity
- iTF_00134147;
- 80% Identity
- -