Smis001054.1
Basic Information
- Insect
- Sitobion miscanthi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_008086715.1
- Location
- Lachesis:1458383-1497147[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-17 6.3e-14 51.3 0.0 1 39 328 367 328 371 0.95 2 3 0.78 4.1e+03 -2.6 0.0 21 31 801 811 800 811 0.85 3 3 3.5e-19 1.9e-15 56.1 0.0 1 43 900 943 900 945 0.95
Sequence Information
- Coding Sequence
- ATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTTGGCGAAAAATTATTTACTGGAAGAGGAATTGATGGACCGGAGAGAATGGGTTCCCGTCAAAACGTGTAACTCGTGTGATGTGAACACAGACCTGAGGGTAGCGGATCACTCACCTGCAGAACTGGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGAGAGTCCGGAACCGGAACCGGGCAGGCGGTCGTCTTCCACACCGCCACCGGCGGCATCAGAGCGGTGTCGCGCCGATGACCGGTCGCCGCCACCACCGCCACTGCTGTTGCTGCCCAACCCCACGGCCGCTGCTGCCGCCGCCGCAATGGCCGCGGTCGCGTCTCTGAACAACTCGTCGTCGTCATCGTCCACGACGACGATGACACCGGCGGGCGAGTCACCGTCGCCCAGCGCGCTGGAAGCCGCGGCCGCCGGCCTGCCGAAATGGCTGTTGGCCGCCGCCACGCTGAGGCTGCAAGAGACCACGGCCGCCGCGGCAGCAGCAGCAGCCGCGGCCACGGCTGCGACCTCGGCGGCCACCAGCTGCAGGTCGCCACCCGCACACCGTCACCACCAGCAACAGCAACAGCAACAACACCAGTCGCTCGATCAACCGCTCGATCTCAGCGCTAAGAGCAACAACAACAACGTCGGCGGTCCGGGTGGCAATGCTTCGTCGTCGCCCGCGTCGTCCACGCCGTCCACGCCGACGTCGACCGAACTGAAAAACGCGTCCGCCGCCGTCGCCGCCGCTAATGCCAACAATCCGTTCACGTCAGATCTCATCGCCACGGACATGGTTAACCAGCTGCGCGACCTGATACCGGGTACGTCCACGTTCCTACCGCACCAACCGCTCAATGTGCCCATGCTCACCAACAACAACCGGAACATATTCAAATCGAAGACGGTGAAACAGCCCAGTCACATGGCCGGCCGGAAGACTTACACGGAAGACGAGTTGCAAAAGGCGCTTCGGGACATCCAGAGTGGCAAGTTGGGCACGAGACGTGCGGCCGTCATATACGGTATACCCCGGTCGACGTTGCGGAACAAGGTGTACAAGTTGGCGCATGAACGGGACAGTAACGGTAGCGGCGGCAACGCAGGAGTGGGCGTCATCAGGGATCCGTCGACGGGCGGAGACGACCCGTCCAATGGACAAGTCACCGAGCTGTTGCCGTTGCTGATCGATGATGATGACGACGAGGACAAAGACACGGTGTCCTTGGGCGAAGACGAGAGCACAAGCAGAGCGGCAGCGGCGGCGGCAGCGGCAGCAGCGGACAGCAAGGACCGCCACCACGCGCCACAGCCGCACCATCAACAACCACCGCAACACCGCAGCCAGCAGCCCAGGACGGCGTCGCCGTACATGACCGTCGAAGACTTGTTGCGGATCACGGCGGAACAACAGCAGCAGGCGGCCGCGGCCATGCCTAACGCCGAGACGTTCCGACTGTTCCTGCAACACTACGCCAACAACAAACTGCTGCAAAACAGGCCAGAACCGCATTACCGTGGCCGCGACGTGTCTATGACTGACGGCCGATCACCGTCGCCACCGTCCACCTCTACCGCCCCCAGGTTTCCGCTGCCCATGTCAGCGGACCTATGGCCGGCAGCCGCAGCTGCTGCGGCCGCTGCTGCAGCCTTGGACCCACAACACATGGGAACCTATCTATCGCAGTTGCTATCTTCATCGGTGGCAGTAGGGTCACCTTCAACTGGACTAGGATCGCCGCGCTTGTTGCCGCCACATGACAGTCCACCACCGCCACCACCACCACCGCCACCGCAGCAGCAAATGTCTGCGGCACACCACCAGCATGAATTATTCCTAAAAGATTACACCGTCAAGGACTTGATGCGCAAAATACTGGACGAAGAGCAACAACAGCAGATGCAGCACTTGCAGCATCAGTTCAGCAACAAGTTGGCAGACCCGAGACGGTGGTCGTCAAACGGCTGCAGTTCATCTGAACCGATGGATACAGGCCGCAGCAACGACGACGACTCGAACCCGTCCAACGTCATCCTTAGAATACCATCGTACAAGCCGGTTCCCGGTGGTAAGGGTAGCGATTACGAGTTGGTGACGTGCGCCAGGGACATCCGGTCCCCGGGGCGGGCCAATAGTGTACGGAGTGACACGTCGTCACCACCGTCGTCATCCGGTGGTGGTGTTGGCAGCAAACATCCGGTTAACCTGAGAGACGCGATCGCCAAGAGCATCACACAAAGGTTCCAGTCGACGTCCGATCAGCCGATCCCACCACCCATACCAGCCGTCGAGTCGTTTGCCCGGGCCTACCAACAGTACCAGCAGCAACATCACCATCACCAACAACAACAACAACACCATCATCATCTTCAGCAGCAGCATGGCATACCCACCTCGTTCGGTACTGGCAACCCCGTCATCAGGAACCACAACAACAACAATTTGCAGCAGGACGACTGCCGGAAACGGGTACCGACGCCCACCAACAAAACATCGTCGGTCGTAACGCCATCGTCCACCGTCGCTGGGTTCCACACCGGCGGCTCGTCGTCGTCATCGTCCAACTCTGCGTCGGCAGCAGCAGCGGCTGCTGCGGCTGCAGCTGCGGCGGCGGCCGGTGGCAAGGGCACCAGGCCCAAGCGCGGCAAGTACCGAAACTACGACCGGGACAGCCTGGTAGAAGCCGTGCGGGCGGTACAACGAGGTGAGATGAGCGTGCACCGGGCTGGTTCTTATTATGGCGTACCGCATTCTACGCTCGAGTACAAGGTCAAGGAGAGACATCTGATGCGACCCAGAAAACGTGAGCCCAAGAACCCTCCGGCCTCGTCCTCCGCGTCTACGTCGGTTGCCGCTGAACATAACCCGGACCGAAAAAAGTCGTCGTCTGACCTGTCGTCTTCGTCGTCGGTCGTCCGGCCAGCCGACAAGACGACTACCACCTCGTCGTCTTCGTCGTCGGCCACGCCGCCGGCCATCAAACTGCCCGCGCACGTCCAGTTCCCGGCGCAACAACAACTGTCGCCGCTACAGACGCCCAACGGGCTCAAGATGTTCGACGCCGCTGGTCCTGTGGGCCCGTATCAGCCGTCGTTCCCGTTCTGGGCCCCCAGTCCGTTCCACGTGCCCATGGATTTCCAGCGAAATCCGGTGGCGTTTGGGCCAATGTCGATGATGCAACGGATCCAGGCCGAGTCGCGGCTACACCACCACCAGGCCGCGGCCGCTGCTGCCGCGTCCATCGCCAGCCTAGGCAAGAACGCTCGCGAGGTGGCTGAAAACCTGTATGACGGAACGGATAATGGCAGCTTCCTGGACGGCATCATTAGGTCCAGCTTGGAGACAGGGCTCAAATCGGCGGCCGCGATGGCGGCCGTTCAAGCGGCGGCCAAGAACGCCACGAAGGGAGGTAGTGGAGAAGGCAGCGGTGGTGACGATGACTGCAGTCGGGACGGTTCACTACGAGTAGGCGGTGCCGAAAACGACGGCGACCGCCACATGGAAGACCTAGCGGCCACGCCACCGTCGTGCCAGGACTCGGCCGCGGACAGCGATGATGAGAAGCCGCGGACCGAGTCACCGGACGGACAGGAACATCGTCATCAGCTACACGACGATTCCGAACACGAAACAAACGCTGATCGGGCGTCCTCCGCTTCGCCCGAACATGCGACTGAAACGGAAAACGACGACGATGACAACGACGCGGTCGTCTGA
- Protein Sequence
- MGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTCNSCDVNTDLRVADHSPAELEPSSETGSLSGGSRSAESPEPEPGRRSSSTPPPAASERCRADDRSPPPPPLLLLPNPTAAAAAAAMAAVASLNNSSSSSSTTTMTPAGESPSPSALEAAAAGLPKWLLAAATLRLQETTAAAAAAAAAATAATSAATSCRSPPAHRHHQQQQQQQHQSLDQPLDLSAKSNNNNVGGPGGNASSSPASSTPSTPTSTELKNASAAVAAANANNPFTSDLIATDMVNQLRDLIPGTSTFLPHQPLNVPMLTNNNRNIFKSKTVKQPSHMAGRKTYTEDELQKALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAHERDSNGSGGNAGVGVIRDPSTGGDDPSNGQVTELLPLLIDDDDDEDKDTVSLGEDESTSRAAAAAAAAAADSKDRHHAPQPHHQQPPQHRSQQPRTASPYMTVEDLLRITAEQQQQAAAAMPNAETFRLFLQHYANNKLLQNRPEPHYRGRDVSMTDGRSPSPPSTSTAPRFPLPMSADLWPAAAAAAAAAAALDPQHMGTYLSQLLSSSVAVGSPSTGLGSPRLLPPHDSPPPPPPPPPPQQQMSAAHHQHELFLKDYTVKDLMRKILDEEQQQQMQHLQHQFSNKLADPRRWSSNGCSSSEPMDTGRSNDDDSNPSNVILRIPSYKPVPGGKGSDYELVTCARDIRSPGRANSVRSDTSSPPSSSGGGVGSKHPVNLRDAIAKSITQRFQSTSDQPIPPPIPAVESFARAYQQYQQQHHHHQQQQQHHHHLQQQHGIPTSFGTGNPVIRNHNNNNLQQDDCRKRVPTPTNKTSSVVTPSSTVAGFHTGGSSSSSSNSASAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPASSSASTSVAAEHNPDRKKSSSDLSSSSSVVRPADKTTTTSSSSSSATPPAIKLPAHVQFPAQQQLSPLQTPNGLKMFDAAGPVGPYQPSFPFWAPSPFHVPMDFQRNPVAFGPMSMMQRIQAESRLHHHQAAAAAAASIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAAAMAAVQAAAKNATKGGSGEGSGGDDDCSRDGSLRVGGAENDGDRHMEDLAATPPSCQDSAADSDDEKPRTESPDGQEHRHQLHDDSEHETNADRASSASPEHATETENDDDDNDAVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972960;
- 90% Identity
- iTF_00018927; iTF_00940282;
- 80% Identity
- -