Acrc027428.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphis craccivora
Gene Symbol
Mblk-1
Assembly
GCA_009835225.1
Location
VUJU01002687.1:455-12556[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-16 8.4e-14 51.7 0.0 1 40 341 381 341 385 0.94
2 2 6.3e-18 3.6e-15 56.1 0.0 1 43 908 951 908 953 0.95

Sequence Information

Coding Sequence
ATGTTCACAGGATTGGAAAGGATCGCTGAAGAGTTAATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTTGGCGAAAAATTATTTGCTGGAAGAAGAATTGATGGATCGGAGAGAATGGGTTCCCGTCAAAACGTGTAATTCGTGTGATGTGAACACAGACCTGAGTATAGCGGATCACTCACCTGCAGAACTGGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGAGAGTCCGGAACCGGAACCGGGCAGGCGGTCGTCGTCCACACCGCCGACGGCGGCATCAGAGCCGTGTTGCGCCGATGACCGATCGCCGCCGCCACCTCCACTGCTGTTGCTGCCCAATCCcacggccgccgccgccgcagccGCAATGGCCGCTGTCGCGTCACTGAACAactcgtcgtcgtcatcgtccaCCACGACGATGACACCGGCCGGCGGGCCACCGTCGCCCGGCTCGCTGGAGGCCGCGGCCGCCGGCCTGCCGAAATGGCTGCTGGCCGCCGCCACGCTGAGGCTGCAAGAGACGACGGCCGCCGCGGCGGCTGCAGCAGCTGCGGCCGCGGCCGCGACGTCGGCGGCCACCGGTCGCAAGTCGCCTCCCGCCAACCGTCAccatcaacaacaacaaaaccaGTCGATCGATCAACCGCTCGATCTCAGCGCCAAgagcaacagcaacaacaacgTTAGCGGTTCGGGCGGTTCGTCGTCCGCGTCGTCCACGCCGTCGTGCCCGAGCTCGTCGTCCACGCCGTCGGCCGAGCTGAAAAACGTGCCGGCCACCGTGGCCGCCACCGTAGCCATCAACCCGTTCACGTCAGATCTCATCGCCTCGGACATGGTGAACCAGCTGCGCGACCTGTTACCGAACACGTCCACGTTCCTACCGCACCCTGCAACGCTCAACGTGCCCATGGTGAACACCAACAACCGGAACATGTTTAAGTCGAGACCGGGAAAACAGCCAAGTCATTTAGCCGGCCGGAAGACTTACACGGAGGACGAGTTGCAAAAGGCTTTGCGAGACATCCAGAGCGGCAAGTTGGGCACAAGACGGGCGGCCGTCATATACGGCATACCGAGGTCGACGTTGCGGAACAAGGTATACAAATTGGCGCTGGAACGGGACAGCACCGGAAGTGGCGGTACCGGCGTTGGCGCTGGAGTAGCCATGAGGGACGCGTCGACCGTCGGAGACGATCCGTCCAACGGACAAGCCGCCGAACTGTTGCCGATGCtggccgacgacgacgacgacgaagacAGGGAAACGGCATCCGTCGAAGACGAATGCAACACGAACAGGGCGACGGCGGACGGCAAGGACCACCACCAACAACACCATCACCACAATTCGGGACACCAACTACATCCGCCGCCGCAGCATCGCGGCCAACAGCCCAGaacgccgtcgtcgtcgtacaTGACAGTCGAAGACTTGCTGCGAATTACGGCGGAACAACAGCAACAGGCGGCCGCGACCATGCCCAACGCCGAGGCACTCCGGATGTTCTTGCAGCATTACACCAACAACAAACTGCTGCAAAACAGACCGGAAACGCATTACCGCGGCTCCGGACGCGACGTACCGGTAGACGGCCGTTCGCCATCGCCACCGCCCACAGCCGCCACCAGGTTTCCGCTGCCCATAACCGCGGACCTGTGGCCGGCGGCTGCGGCGGCcgcagcggcggcggcagccTTGGATCCTCAACACATGGGAACGTATCTGTCGCACTTGTTGTCCTCATCAGTGACGTCGCCCGCGGCCGGATTGGTGTCGCCGCACTTGCAAGCGTCTGGAAGTtcgccgccaccgccaccaCTACCGCCGCAGCAACACGTGTCAGCGGCTCACCACCACCAGCAAGAATTCCTCAAAGATTTCACCGTCAAGGACTTGATGCGCAAAATATTGGATGAagagcaacagcaacagcttCAGCAGTTGCAGCTACAGTACGGAAACAAACTGGTAGACGCCAGACGGTGGACGTCGAACGGTTGCAGTTCATCCGAACCCATGGACACGGGTCGAAGCAACGACGACGATTCCAATCCGTCCAACGTCATCCTGAGAATACCGTCGTACAAGCCGGTTCCTGGCAGTAAGGGTGGCGATTACGAGTCGGCGGTGAGCGGTAGGGACGTCTCGTCTCCCGGCCGAGCCAACAGCGCCCGGAGCGATTCATCGTCACCGCCGTCATCGTCCGGTGGCGGCAAACATCCGGTAAACCTGAAAGATGTGATAGCTAAGAGCATCACGCACAGGTTCCAATCAGACCCACCGCTTCCACCACCCATACCGGCCGTCGAATCGTTCGCCCGGGCCTATCAACAATACCAACAGCAACACCAccatcaacaacaacaacaacaacaccaTCATCAtctgcagcagcagcaaccGATCGGCATGTCCGCTTCTTTCGGTTCCGGCAACTCCGTCATCAGGAaccacaacaacaacaatctGCAGCAGGACGACTGCCGGAAACGAGTGCCGACACCCACCAACAAATCGTCATCGTCGGTCATAACGCCCTCGTCTGCCAGCGCCGGGTTCCACACTGGCAGCTCTTCGTCGTCGTCTTCCAACTCGGCGTCGGCAGCGGCCGCTGCGGCTGCGGCTGCTGCTGCGGCAGCAGCTGGTGGCAAGGGCACCAGGCCAAAGCGAGGCAAGTACCGAAACTATGATCGGGACAGCCTGGTGGAAGCCGTGCGAGCGGTGCAGCGCGGCGAGATGAGTGTGCACCGGGCCGGGTCTTATTACGGAGTGCCACACTCCACGCTCGAATACAAGGTCAAGGAGAGACATCTGATGCGGCCCAGGAAACGCGAGCCAAAGAACCCTCCGTCATCGTCATCGGTGTCCGCCGCCGTCGCCGACCATCACTCGGACCGGAAAAAGTCATCCTCCGATCTGTCGTCTTCGTCATCGTCGGTCGTCCGGCCGGCCGACAAGACCACCACCACTTCGTCGTCCTCGTCCTCCGCCACCCCACCAGCTATTAAACTGCCAGCACACGTCCAGTTCCCGGTTGCGGCGCAGCAACAGCCGTCGTCGCTTCCGACACCCAACGGGCTAAAAATGTTCGACGCCGCGGGTGGTCCGGTGGGCCCATACCAACCGTCGTTCCCGTTCTGGGCCCCGAGCCCGTTCCACGTGCCCATGGAGTTCCAGCGCAATCCCGTCACGTTCCCGCCGATGTCGATGGTGCAACGAATGCAGGCCGAGTCTCGGCTACACCATCACCAGGCCGCGGCCGTGGCAGCCGCGTCCATCGCCAGTTTGGGCAAAAACGCCCGCGAGGTGGCCGAAAACCTGTATGACGGGACGGACAACGGCAGCTTCCTGGACGGCATCATCAGGTCCAGTTTGGAGACGGGGCTCAAGTCGGCTGCCACCATGGCAGCCGTCCAAGCTGCCGCCAAGAACGCCATAAAAGGAGGAGGGGCAGGTAGAGATGACGTTGGCAGTGGCGGCGAAGACTGCAGTCCGGAAGGTTCGCCGCGAGCGGCTGGGCCCGAAGACGACTGCGAAGACCGACCGGCCTCGCCACCGTCGTGCCAGGACTCGGCCGCGGACAGCGAAGACGAGAAGTCACGATTGGAGTCTCCGGACGGACAGGAACATCGTCATCGTTATCGGCAGCACGACGATTCCGAACACGAAACAGTGGCCGACCGGGCGTCAACCGCGTCGCCCGAACGCGTCGCGACCGAAACAGAAAACGACGATGACGACATCGCCGACGCGGTCGTCTGA
Protein Sequence
MFTGLERIAEELMGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTCNSCDVNTDLSIADHSPAELEPSSETGSLSGGSRSAESPEPEPGRRSSSTPPTAASEPCCADDRSPPPPPLLLLPNPTAAAAAAAMAAVASLNNSSSSSSTTTMTPAGGPPSPGSLEAAAAGLPKWLLAAATLRLQETTAAAAAAAAAAAAATSAATGRKSPPANRHHQQQQNQSIDQPLDLSAKSNSNNNVSGSGGSSSASSTPSCPSSSSTPSAELKNVPATVAATVAINPFTSDLIASDMVNQLRDLLPNTSTFLPHPATLNVPMVNTNNRNMFKSRPGKQPSHLAGRKTYTEDELQKALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERDSTGSGGTGVGAGVAMRDASTVGDDPSNGQAAELLPMLADDDDDEDRETASVEDECNTNRATADGKDHHQQHHHHNSGHQLHPPPQHRGQQPRTPSSSYMTVEDLLRITAEQQQQAAATMPNAEALRMFLQHYTNNKLLQNRPETHYRGSGRDVPVDGRSPSPPPTAATRFPLPITADLWPAAAAAAAAAAALDPQHMGTYLSHLLSSSVTSPAAGLVSPHLQASGSSPPPPPLPPQQHVSAAHHHQQEFLKDFTVKDLMRKILDEEQQQQLQQLQLQYGNKLVDARRWTSNGCSSSEPMDTGRSNDDDSNPSNVILRIPSYKPVPGSKGGDYESAVSGRDVSSPGRANSARSDSSSPPSSSGGGKHPVNLKDVIAKSITHRFQSDPPLPPPIPAVESFARAYQQYQQQHHHQQQQQQHHHHLQQQQPIGMSASFGSGNSVIRNHNNNNLQQDDCRKRVPTPTNKSSSSVITPSSASAGFHTGSSSSSSSNSASAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPSSSSVSAAVADHHSDRKKSSSDLSSSSSSVVRPADKTTTTSSSSSSATPPAIKLPAHVQFPVAAQQQPSSLPTPNGLKMFDAAGGPVGPYQPSFPFWAPSPFHVPMEFQRNPVTFPPMSMVQRMQAESRLHHHQAAAVAAASIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAATMAAVQAAAKNAIKGGGAGRDDVGSGGEDCSPEGSPRAAGPEDDCEDRPASPPSCQDSAADSEDEKSRLESPDGQEHRHRYRQHDDSEHETVADRASTASPERVATETENDDDDIADAVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00972960;
90% Identity
iTF_00135227;
80% Identity
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