Apis007628.1
Basic Information
- Insect
- Acyrthosiphon pisum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_005508785.1
- Location
- NC:47625518-47667868[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 7e-14 51.2 0.0 1 39 391 430 391 434 0.95 2 2 3e-18 2.1e-15 56.1 0.0 1 43 967 1010 967 1012 0.94
Sequence Information
- Coding Sequence
- ATGCAGTTGCAGCGCCGCACTGCCGTCGGATGCGGCCCGTGCCCTGCCACGGCTCACGACCGTCAGGCGGTCAGGAAACACTTGCGCCGGTGGTCACACAACATGGTGCTCATCATCGGGTTGGAAAGGATCGCTGAAGAGTTAATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTTGgcgaaaaattatttactggAAGAGGAATTGATGGACCGGAGAGAATGGGTTCCCGTCAAAACGTGTAGTTCGTGTGATGTGAACATAGACCTGAGCGTAGCGGATCACTCACCTGCAGAACTGGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGAGAGTCCGGAACCGGAACCGGGCAGGCGGTCGTCTTCCACACCGCCCCCGGCTGCATCAGAGCCGTGTCGCGCCGATGACCGgtcgccgccaccaccgccactGCTGTTGCTGCCCAACCCCAcggccgctgccgccgccgccgcaatgGCCGCGGTCGCGTCTCTGAACAactcgtcgtcgtcatcgtccaCAACGACGATGACACCTGCGGGCGGGCCACCATCGCCCAGCGCGCTGGATGCTGCGGCCGCCGGCTTGCCGAAATGGCTGTTGGCCGCCGCCACGCTGAGGCTGCAAGAGACCACAGCCGCCgcggcagcagcagcagccgcGGCCACGGCTGCGAACTCAGCGGCCATCAGCTGTAGGTCGCCACCTGCCCACCGTCACCaccaacagcaacagcagcaacaacagcaacaacaacaacaacaacaacaacagtcgCTCGATCAACCGCTCGATCTCAGCGCTAagagcaacaacaacaacgtcAGCGGTCCGGGAGGCAACGCTTCGTCGTCGCCCGCGTCGTCCACGCCGTCGTGCCCGAGCTTGCCGTCAACGCCGTCGTCGTCCGAGCTAAAAAACGCGTCCTccaccgtcgccgccgccgttgcCATAAACCCGTTCACGTCAGATCTCATCACCACGGACATGGTTAACCAGCTGCGTGACCTTATACCGGGTACGCCCACGTTCCCACCGCACCAATCGCTCAATGTGCCCATGCTCACCACCAACAACAACCGGAACATATTCAAATCGAAGACGGTGAAACAGCCCAGTCACATGGCCGGCCGGAAGACTTACACGGAGGACGAGTTGCAAAAGGCGCTTCGGGACATCCAGAGTGGCAAATTGGGCACGAGACGTGCGGCCGTCATATACGGCATACCCAGGTCAACGTTGCGGAACAAGGTGTACAAGTTGGCGCACGAACGGGACAGTAACAGTGGTGGTGGCGTAGGAGTCGGCGTTATCAGGGATCCGTCGACGGGTGAAGACGACCCGTCCAATGGACCAGTCACTGAGCTGTTGCCGTTGCTGACCGAGGATGACGACGACGAGGACAGGGACATGGCGTCCGTGGGCGAAGACGAGTGCACAAGCAGAGCAGCAGTGGCGGCGGACAACAAGGACACCAAGGACAACAAGGACCGCCACCACGCGCCACAGCCGCACCATCAACAACCACCGCAACACCACAGCCAGCAGCCCAGGACAGCGTCGTCGTACATGACCGTCGAAGACTTGTTGCGGATCACGGCGGAACAACAGCAGCAGGCGGTCGCGGCCTTGCCCAACGCCGAGACGCTCCGACTGTTCCTGCAACACTACGCCAACAACAAACTGCTGCTAAACAGGCCAGAACCGCATTACCGTAGCCGCGACGTATCTATGACTGACGGCCGATCGCCGTCGCCACCATCCACCTCCACCGCCCCCAGGTTTCCGCCCATGTCAGCGGACCTATGGCCGGCAGCTGCAGCTGCTGCGGCCGCGGCTGCGGCCTTGGACCCACAACACATGGGAACCTATCTATCGCAGTTGCTGTCTTCATCGGTGGCAGCAGGGCCACCTTCAGCTGTACTAGGATCGCCACGCTTATTGCCACCACATGACAgtccaccaccgccaccaccgccaccgccaccgcagcagcagcagcagcaaatGCCTGTGACCCACCACCAGCATGAATTATTCCTAAAAGATTTCACCGTCAAGGACTTGATGCGTAAAATACTGGACGAAGAGCAACAACAGCAGATGCAGCACTTGCAGCATCAGTTCAGCAACAAGTTGGCAGACCCGAGACGGTGGTCGTCGAACGGCTGCAGTTCATCTGAACCGATGGACACAGGCCGCAGCAACGACGACGATTCGAACCCGTCCAACGTCATCCTTAGAATACCATCGTACAAACCGGTTCCCGGTGGTAAGGGTAGCGATTACGAATTGGTGACGTGCGTCAGGGACATCCGGTCCCCGGGGCGAGCCAACAGTGTAAGGAGTGACACGTCGTCACCACCGTCGTCATCTGGCGGTGGTGTTGGCAACAAACATCCGGTCAACCTGAGAGACGCGATCGCCAAGAGCATCACACAAAGGTTCCAGTCGACGTCCGATCAGGCGATCCCACCACCCATACCAGCCGTTGAGTCGTTTGCCCGGGCCTACCAACAGTACCAGCAGCAACACCACCAtcaccaacaacaacaacaacaccaTCACCATcttcagcagcagcagcagcatgGCATATCCACCTCGTTCGGTACTGGCAACCCCGTCATCAGGAatcacaacaacaataatttgcAGCAGGACGACTGCCGGAAACGGGTACCGACGCCCACCAACAAAACATCGTCGGTCGTAACGCCATCGTCCAACGTCGCTGGGTTCCACACTGGCAGttcatcgtcgtcatcgtccAACTCGGCGTCAGCTGCAGCAGCGGCTGCTGCGGCTGCGGCTGCGGCGGCGGCCGGTGGCAAGGGCACCAGGCCCAAGCGGGGCAAATACCGAAACTACGACCGTGACAGCCTGGTAGAAGCCGTGCGTGCGGTGCAACGGGGTGAGATGAGCGTGCACCGGGCCGGTTCTTATTACGGCGTACCGCATTCTACGCTCGAGTACAAGGTCAAGGAAAGACATCTAATGCGACCTAGGAAACGTGAGCCCAAGAACCCTCCGGCCTCGTCCTCCGCGTTCACCTCGGTTGTCGCCGAACATCACCCGGACCGAAAAAAGTCGTCGTCCGACTTGTCGTCTTCGTCGTCGGTCGTCCGGCCAGCCGACAAGACGACTACCACCTCGTCGTCCTCGTCGTCGGCCACGCCGCCGTCCATCAAACTGCCCGCGCACGTCCAGTTCCCAGCACAACAGCAACTGTCACCATTACAGACGCCCAACGGGCTCAAGATGTTCGACGCCGCGGGTCCTGTGGGCCCGTATCAGCCGTCGTTCCCGTTCTGGGCCCCCAGCCCGTTCCACGTGCCCATGGATTTCCAGCGGAATCCGGTGGCGTTTGGGCCAATGTCGATAATGCAACGGATCCAGGCTGAGTCACGGCTACACCACCACCAGGCAGCGGCCGCGTCCATCGCCAGCCTGGGCAAGAACGCCCGCGAGGTGGCCGAAAACCTGTACGACGGAACCGATAACGGCAGCTTCCTGGACGGCATCATCAGGTCCAGCTTGGAGACGGGGCTCAAATCGGCGGCTGCCATGGCGGCCGTCCAAGCGGCGGCCAAGAGCGCCACGAAGGGAGGAGATGGAGAAGGCAGCGGTGGTGACGATGACTGCAGTCGGGACGGTTCACCACGAGTAGCCGGTGCCGAAAACGACGGTGACCGCCACATGGAAGACCTAGCGGCCACTCCACCATCGTGCCAGGATTCGGCCGCGGACAGCGATGATGAAAAGCCGCGGACCGAGTCACCGGACGGACAGGAACATCGTCATCAGCTGCACGACGATTCCGAACACGAAACAAACGCTGATCGGGCGTCCACAGCTTCGCCCGAACATGCGACCGAAACGGAAAACGACGACGATGACAACGATGCGATCGTCTGA
- Protein Sequence
- MQLQRRTAVGCGPCPATAHDRQAVRKHLRRWSHNMVLIIGLERIAEELMGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTCSSCDVNIDLSVADHSPAELEPSSETGSLSGGSRSAESPEPEPGRRSSSTPPPAASEPCRADDRSPPPPPLLLLPNPTAAAAAAAMAAVASLNNSSSSSSTTTMTPAGGPPSPSALDAAAAGLPKWLLAAATLRLQETTAAAAAAAAAATAANSAAISCRSPPAHRHHQQQQQQQQQQQQQQQQQSLDQPLDLSAKSNNNNVSGPGGNASSSPASSTPSCPSLPSTPSSSELKNASSTVAAAVAINPFTSDLITTDMVNQLRDLIPGTPTFPPHQSLNVPMLTTNNNRNIFKSKTVKQPSHMAGRKTYTEDELQKALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAHERDSNSGGGVGVGVIRDPSTGEDDPSNGPVTELLPLLTEDDDDEDRDMASVGEDECTSRAAVAADNKDTKDNKDRHHAPQPHHQQPPQHHSQQPRTASSYMTVEDLLRITAEQQQQAVAALPNAETLRLFLQHYANNKLLLNRPEPHYRSRDVSMTDGRSPSPPSTSTAPRFPPMSADLWPAAAAAAAAAAALDPQHMGTYLSQLLSSSVAAGPPSAVLGSPRLLPPHDSPPPPPPPPPPQQQQQQMPVTHHQHELFLKDFTVKDLMRKILDEEQQQQMQHLQHQFSNKLADPRRWSSNGCSSSEPMDTGRSNDDDSNPSNVILRIPSYKPVPGGKGSDYELVTCVRDIRSPGRANSVRSDTSSPPSSSGGGVGNKHPVNLRDAIAKSITQRFQSTSDQAIPPPIPAVESFARAYQQYQQQHHHHQQQQQHHHHLQQQQQHGISTSFGTGNPVIRNHNNNNLQQDDCRKRVPTPTNKTSSVVTPSSNVAGFHTGSSSSSSSNSASAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPASSSAFTSVVAEHHPDRKKSSSDLSSSSSVVRPADKTTTTSSSSSSATPPSIKLPAHVQFPAQQQLSPLQTPNGLKMFDAAGPVGPYQPSFPFWAPSPFHVPMDFQRNPVAFGPMSIMQRIQAESRLHHHQAAAASIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAAAMAAVQAAAKSATKGGDGEGSGGDDDCSRDGSPRVAGAENDGDRHMEDLAATPPSCQDSAADSDDEKPRTESPDGQEHRHQLHDDSEHETNADRASTASPEHATETENDDDDNDAIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972960;
- 90% Identity
- iTF_01350202;
- 80% Identity
- -