Basic Information

Insect: Lycocerus yunnanus
Gene Symbol: lrrfip2
Assembly: GCA_036346125.1
Location: JARFIX010000062.1:124844-128908[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.032 1.4e+03 -0.4 0.8 146 177 66 97 29 99 0.71

2 3 3.4e-104 1.5e-99 334.4 33.4 1 300 107 402 107 402 0.93

3 3 0.017 7.3e+02 0.4 7.0 120 171 400 451 399 476 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.032	1.4e+03	-0.4	0.8	146	177	66	97	29	99	0.71
2	3	3.4e-104	1.5e-99	334.4	33.4	1	300	107	402	107	402	0.93
3	3	0.017	7.3e+02	0.4	7.0	120	171	400	451	399	476	0.79

Sequence Information

Coding Sequence: ATGGGCGATGCGGAGTTGAAGAATTCAAATATTTCCGGTAGTGTCGACTCGCTGCAAGATATTTTGAACGATTTAAATTCGGAAAGTGACGATTCGGCCGACTTGGTGGTGGACGATGAGGAAAATTTAAACGTGTCGGATGTTGCACTGAGAAAATCGCGATTTTCCAAAAGCGACGAAGAAAATTACCAAAAGATTGAAAACGACATTTTGCAACAACGCCACGATAATTTGGATAATTTGTTCGATAACGTTAAGGACGAATTTAATCAAACCAATAACATCATTAAGCAGTTTCTTGACGATTGCAACGATGATgcGGAAGCGCGGCTATTGGCAAGAAGGCAGGCCAGAGCAGAGGCGAGAGACATACGGATGCGGGAATTAGAGCGGCAACAAAGAGAACAAGAAGAAAATGCTGATAGGCAATATGACATGTTGGAGGCGACAAGTAGAGCAACACGAACCGTTGGCAGTAGGTACCTTTCGAGCAGGCGAAGCTCGGAGGATTCCCTCGAAGATGGCGGAAGTATCAGAGAAATAAGACACGATCTTAAAGAAATGGAAGAGAAGTTCCGTAAAGCTATGATAGCAAACGCTCAACTGGATAACGACAAAGCGTCGCAGACCTATCAGTTAGAATTGCTGAAGGATAGGTTGGAAGAATTGGAGGAAGAACATTCCCAGTTGAAGCGCGAGCATAGGGACAAGTGTAGGGATTATGATCAATTGAAACGTTTAGCTTCTCAGCTAAAAGACGACATTGCTGTTGTTAAGGCTGAGTTAGAGGAACGAGATCGATTAATAACCGAGAAAGGCTTAGTTATAGTAATAGAAGATCTTATTCCAATTGAAGAACAAAATAGTCGTGATATAAGTAATTGTAGTAGTGCCGGTAATACTCCTAGAAAAGCCTTAGTGAGTGCCAAAAATGCCCAGCTATTAGAAAATTCAGGCGAAGGAAGTTTAGacgTCCGGTTGGGCAGATTTGCAACTGAAAGAAAAGATTTAGAGGATCAGATAAGTCATTTACGTTTAGAATTAGAAGATGAGAGGAGTAAAAAGAGGAAAAGTAGCGGAGGGGTCACTTTGAATGGTCCCACGTCAGATTCGGAATTGGATGCCGATGACTtgcaaaaagATGTCGTCAGGCAGTTGGCTGATTATAAATTTAGAGCTCAAAAGGCCGAACAGGATGTGGCGACATTGCAGGCGACTGTAGCCAGATTGGAAAGTCAAGTCATTAGGTACAAATCTGCTGCGGAAATTTATGAAAAGTCGGAAGAAGCGCTAAAGCAAGAAAAGAGAAAATTGCAGAGAGAGgcCCGCGAAGCTCAAAACAAAGCGGAAGAACTGGAAACATCAAATTCTCACCTGTTAAAGCGTTTAGATAAGCTCAAAAATGCCAAATCAACGTTACTCAAAGAACTTTGA
Protein Sequence: MGDAELKNSNISGSVDSLQDILNDLNSESDDSADLVVDDEENLNVSDVALRKSRFSKSDEENYQKIENDILQQRHDNLDNLFDNVKDEFNQTNNIIKQFLDDCNDDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMLEATSRATRTVGSRYLSSRRSSEDSLEDGGSIREIRHDLKEMEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEHSQLKREHRDKCRDYDQLKRLASQLKDDIAVVKAELEERDRLITEKGLVIVIEDLIPIEEQNSRDISNCSSAGNTPRKALVSAKNAQLLENSGEGSLDVRLGRFATERKDLEDQISHLRLELEDERSKKRKSSGGVTLNGPTSDSELDADDLQKDVVRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEIYEKSEEALKQEKRKLQREAREAQNKAEELETSNSHLLKRLDKLKNAKSTLLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01293688;
90% Identity: iTF_01291566; iTF_00271153; iTF_00268265; iTF_00269803; iTF_00272529; iTF_01293688;
80% Identity: -