Cfla030384.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949152465.1
- Location
- OX424440.1:817946-820568[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.039 1.5e+03 -0.7 0.9 135 174 25 68 5 89 0.51 2 3 2.3e-103 9.2e-99 331.6 32.3 1 300 98 393 98 393 0.93 3 3 0.017 6.7e+02 0.5 7.0 120 171 391 442 390 467 0.79
Sequence Information
- Coding Sequence
- ATGGACCATGTGAAGAATTCTAATACTTCCGGTAGTGTCGACTCGCTCCAAGATATTTTGAACGATCTAAATTCCGAAAGTGACAATTCGGACGAAGAAAAACTAAACGAGTTTGGTGTCACACTGAGAAAACCACGATCTTCCAAAACCCAGGACGAGGAAGATTACCAAAAGGTTCAAAACGACATTCGACAGCTTGAACATTTTGCCGATTCGCTCGATAATGTTAAGGACGAATTTAATCTAACCAATAACATCATTAAGCAGTTTCTCGATGATTGCAACGGTGATGCGGAAGCGCGGCTTTTGGCAAGAAGGCAGGCCAGAGCAGAGGCGAGAGACATACGGATGCGGGAATTAGAGCGGCTACAAAGAGAACAAGAAGAAAATGCGGATAGGCAATATGACATGCTGGAAGCGACCAGTAGAGCGACGCGAACCGTTGGTAGTAGGTACCTTTCGAGCAGGCGGAGCTCGGAAGATTCGCTCGAAGATGGCGGAAGTATCAGAGAAATAAGACACGATCTTAAAGAAATGGAAGAGAAGTTCCGTAAAGCAATGATAGCGAACGCTCAGCTGGATAACGACAAAGCGTCGCAAACCTATCAGTTAGAATTGTTAAAGGATAGATTGGAAGAATTGGAGGAGGAACATTCCCAGTTGAAGCGTGAGCATAGGGATAAGTGTAGAGATTTTGACCAATTGAAGCGTTTGGCTTCCCAGCTCAAAGACGACATTGCCGTGGTTAAGGCTGAGTTAGACGAACGAGATCGGTTGATAACCGAGAAAGGCTTAGTTATAGTAATAGAAGATCTTATTCCAATTGAAGAACAAAATAGTCGTGATATAAGTAATTGTAGTAGTGCCGGAAATACCCCTAGGAAGGCCTTAGTTAGTGCCAAAAATGCCCAGCTATTAGAAAATTCAGGCGAAGGAAGTTTAGACGTCCGGTTAGGCAGATTTGCAACTGAAAGAAAAGATCTAGAAGATCAGATAAGTCATTTACGTTTAGAATTAGAAGAAGAGAGGAGTAAGAAGAGGAAAAGTAGCGGGGGAGTTACTTTGAATGGTCCCACGTCCGATTCGGAATTGGATGCCGATGACTTgcaaaaagATGTCGTCAGGCAGTTGGCCGATTATAAATTTAGAGCTCAAAAGGCCGAACAGGATGTGGCGACGTTGCAGGCCACCGTGGCCAGATTGGAAAGTCAAGTCATTAGATACAAATCTGCTGcggaaatttatgaaaaatcgGAAGAAGCGTTAAAACAAGAAAAGAGGAAGTTACAGAGAGAGgCCCGCGAAGCTCAAAACAAAGCGGAAGAATTGGAAACGTCAAACTCGCACCTGTTAAAGCGTTTAGATAAGCTCAAAAATGCCAAATCAACTTTACTCAAAGAACTTTGA
- Protein Sequence
- MDHVKNSNTSGSVDSLQDILNDLNSESDNSDEEKLNEFGVTLRKPRSSKTQDEEDYQKVQNDIRQLEHFADSLDNVKDEFNLTNNIIKQFLDDCNGDAEARLLARRQARAEARDIRMRELERLQREQEENADRQYDMLEATSRATRTVGSRYLSSRRSSEDSLEDGGSIREIRHDLKEMEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEHSQLKREHRDKCRDFDQLKRLASQLKDDIAVVKAELDERDRLITEKGLVIVIEDLIPIEEQNSRDISNCSSAGNTPRKALVSAKNAQLLENSGEGSLDVRLGRFATERKDLEDQISHLRLELEEERSKKRKSSGGVTLNGPTSDSELDADDLQKDVVRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEIYEKSEEALKQEKRKLQREAREAQNKAEELETSNSHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01293688;
- 90% Identity
- iTF_00927690;
- 80% Identity
- -