Rful017617.1
Basic Information
- Insect
- Rhagonycha fulva
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_905340355.1
- Location
- HG996559.1:22330590-22344443[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-104 9.4e-100 334.6 33.9 1 300 104 399 104 399 0.93 2 2 0.016 5.4e+02 0.5 6.9 120 171 397 448 396 473 0.79
Sequence Information
- Coding Sequence
- ATGGGCGATATGAACTTGAAGAATTCTAATACTTCCGGTAGTGTCGACTCGCTGGAAGATATTTTGAACGATTTAAATTCTGAAAGTGACGATTTGGACTTGGTGGGTGATGAGGAAAATTTGAACGAGTTGGATGTTACCCTGAGGAAACCGCGAATTTATAAAATCGAGGAGGAAGAAAATTACCAAAAAATTCCAAAAGATATTTTGCAAGAACATGATAATTTGGTTATGCTCGATAATGTAAAGGACGAATTTAATCAAACTAATAACATCATTAAACAGTTTCTTGATGACTGCAACGATGATGCGGAGGCGCGGCTTTTGGCAAGAAGGCAGGCCAGAGCAGAGGCGAGAGACATACGGATGCGGGAATTAGAGCGGCAACAAAGAGAACAAGAAGAAAATGCCGATAGGCAATACGACATGCTGGAGGCGACTAGTAGAGCGACGCGAACAGTTGGTAGTAGGTACCTTTCGAGTAGGCGAAGCTCAGAGGATTCGCTTGAAGATGGTGGAAGTATCAGAGAAATAAGACACGATCTTAAAGAAATGGAAGAGAAGTTCCGTAAGGCAATGATAGCAAACGCTCAGCTGGATAATGACAAAGCATCGCAAACTTATCAGTTGGAATTGCTGAAGGATAGGTTGGAAGAATTGGAGGAAGAACATTCCCAGTTGAAGCGCGAGCATAGGGACAAGTGTAGGGATTATGATCAATTGAAACGTTTAGCTTCTCAGCTCAAAGACGACGTGGCTGTGGTTAAGGCTGAGTTAGAAGAGCGCGATCGGTTAATAACCGAAAAAGGCTTAGTTATAGTAATAGAAGATCTTATTCCAATTGAAGAACAAAATAGTCGTGATATAAGTAATTGTAGTAGTGCCGGAAATACTCCTAGAAAGGCCTTAGTGAGTGCCAAAAATGCCCAACTATTAGAAAATTCGGGCGAAGGAAGCCTTGACGTCCGGTTAGGCAGGTTTGCGACGGAAAGAAAAGACCTAGAGGATCAGATAAGTCATTTACGTTTAGAATTAGAAGAAGAGAGGAGTAAGAAGAGGAAAAGCAGTGGGGGTGTTGCTTTGAATGGTCCCACATCCGACTCGGAATTAGATGCCGATGATTTGCAAAAAGATGTCGTCAGGCAGTTGGCCGATTATAAATTTAGAGCTCAGAAGGCCGAGCAGGATGTGGCAACGTTGCAGGCGACCGTCGCTAGGTTGGAGAGTCAAGTCATTAGGTACAAATCTGCCGCCGAAATTTACGAGAAGTCGGAAGAAGCGCTGAAACAAGAAAAGAGGAAGTTACAGAGAGAGGCCCGCGAAGCTCAAAACAAGGCGGAAGAATTGGAAACATCAAACTCTCACCTATTAAAGCGTTTAGATAAGCTCAAAAATGCTAAATCAACGTTACTCAAAGAGCTTTGA
- Protein Sequence
- MGDMNLKNSNTSGSVDSLEDILNDLNSESDDLDLVGDEENLNELDVTLRKPRIYKIEEEENYQKIPKDILQEHDNLVMLDNVKDEFNQTNNIIKQFLDDCNDDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMLEATSRATRTVGSRYLSSRRSSEDSLEDGGSIREIRHDLKEMEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEHSQLKREHRDKCRDYDQLKRLASQLKDDVAVVKAELEERDRLITEKGLVIVIEDLIPIEEQNSRDISNCSSAGNTPRKALVSAKNAQLLENSGEGSLDVRLGRFATERKDLEDQISHLRLELEEERSKKRKSSGGVALNGPTSDSELDADDLQKDVVRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEIYEKSEEALKQEKRKLQREAREAQNKAEELETSNSHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01293688;
- 90% Identity
- iTF_00927690;
- 80% Identity
- -