Llea011413.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- -
- Assembly
- GCA_949152455.1
- Location
- OX424468.1:15516040-15519866[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-10 2.3e-07 31.1 0.0 3 37 93 127 91 133 0.93 2 2 3.6 2e+03 -0.7 0.0 22 30 218 226 204 227 0.75
Sequence Information
- Coding Sequence
- ATGAAATGGACTCTGACTATGAGGCACTTCTCTTCCACACAGAGGTTCGATGGCTATTCGAAAGAATATACCGAAGACGCTAAAATTGATCAAAAACTGATACGTAACCCCTTTAGCACAGACGCTGGTGAAGTTACTGAAGGAATCCAGGAAGAACTTATTGAAATCCAAAATGACAGAAACTGCAAGGATGCTTTTGAATCTAATTCACTTGAGTCGTTTTGGTATAATGTCTCGGAAGTTTTAAGAACGACACTACGAGCATCATGGAGTGCAGAcgatttagataaagccatgcGTAGTGTACTAAACAAAGTAATGGGTGTTAATGAGGCATCCAGAAACTTTGGCATACCATCTCGAACCCTAAGAAGACACATTTTATCAGGAAAATCAAAGGGTCCTCTAGGACGTAAACCAGTATTTTCAGGTGAATACGAAAAAAAACTGGTTGCCCATATAAAGAAATTGGAAAAAGTTGGATTTGCCCCTGACAGAAAAGACGTAACAGAAATGGCATTTCAACTAGCTAAGAAACTCAATATTAAAAACCCATTTTCAGCAAGTTCAGAATCAGCTGGAAATGTATGGTTTTCGGGATTCATGACTCGCAACTCAGAATTAAGTCAAAGAAAATCAGAAGGCTTGTCACTTGCTCGAGCTTATGGAGTTAATAGAAAAGATGTACGGGACTTTTTTGATTTACTAGCCAAAATCTACGAAGAAAGTGATTTGGCACATCACCCCGAAGATATTTTCAACATGGACGAGTCCGGCATACAGGTGAACAACAAACCAGGAAGAGTAGTCGCCACAAAGGGAGCCAAAGATGTCTACACGCTCACTAGCTCTGAAAAGGGTGAAAACGTAACGGTCATTGCTTGTTGTAATGCACAAGGTAACTTCATTCCCCCAGTTTTAATCTATAAGGGTACTTACAGCAAACCACAATTTTCCGAAGGTCTTCCTCCAGGATCACAGGTATTTATGAACAAAAAATCTTCTTATATAAATACAGATCTCTTCATGCAATGGTTTGAAGAAGTGTTTCTGCGTCACAAGAGTTCTCGAAGAACATTGTTAATATTAGATGGTCACAGCTCGCATAGTAACAATATTCGCCTACTGGAAGTGGCTAAAGAAAATGATGTCATTCTTTTGTGCTTACCAAGTCACACTACGCATGCTCTGCAGCCACTTGATAGAGCCTTTTTTAGGCCATTGAAGGTATACTTTGCCCAGGAAGCGAAGACATGGATGGTCAGGAACAAAGACAAGAAGTTGACGAGCTATGACGTGTCTAAATTAATCGGAAGAGCTTGGGGCAAAGCTGCCACTGTTTCCAATGGTGTGTCAGCTTTAAAATCATGTGGAATTTATCCTTTTGATCCGAGTGCCATTCCTGATCACTATTTTTCACTATCCGATTCATTGCGAGACCAAAATTTAGTTGTTGAAGATGAGGATGGGACGTCAAGAGAGTCTCTGTCATTACTTCAAGAATATGACGATAGTGCACTACTTGCGTTTGATACAATCCATTCATCCCCACAGCATATCGAGAATGATTTAGAGGCTAGGACATTAGGATCACTACCTGTAGTCACTTCTGAATTCCAACCTGAGCCAGGTCCTTCAGGGCTAAATCTAACTaatcaaaattatgaaaatagtttAATGGCAGTAGTAATTGAGCATACATTGCCTATGCAAGATGCACCTGTGGCAGAAGAGTTACATCAAATGAATATCGTTTTGCCAATAACACCACGAAAACATGCGGAACAGTGTCATATCGAGAGTGAGTCGTGTCTGACTATTGCGAAGTCTAATcttattgatttgattgaacAAACCCCTGAAAAGCAAATAGGATCTACCGAGTCTGAAGCAACACCATCCAAAGTTTTGAATGACATCCATCCAGTGCCTAAACTCCCAGTAGTATTGTCTAAGAGAAAacaaaaagctgttattttgacttCTGCTGAAAATATAGAGAAACGGAAAGTAATTGCTGATAAAAAGAAACCAGCAGCTGGAAAATTAAAGCATGCTAAGCCCACTAAGAGAATTAAAACaatgaaagaaaaagataatgttaaaaagaaacaagaaaaaGGGGGTAAAAAGAAGCCAAAGAAACGTCCTGTCagaaataagaataagaaaaaagaaagctATTCATCGTCTTCTGAAAGCAATGACGAAAAtgagggtagggtagatacttcTGAAGAAGAAATGTCAGACGAACACGATGACCTTAACAGATGCGTTGAATGCACGGAAAATTATTATGACACAAAATCCACTGAAGATTGGATTCAATGCCCGTCTTGTTTATCATGGTTGCATGAGTTTTGCACAATGTATAACCCTATGTGTAATCGGTGTGGACGCAAAGCCAAAAAAGAAGCTGTTAACAAAAATAGactgtaa
- Protein Sequence
- MKWTLTMRHFSSTQRFDGYSKEYTEDAKIDQKLIRNPFSTDAGEVTEGIQEELIEIQNDRNCKDAFESNSLESFWYNVSEVLRTTLRASWSADDLDKAMRSVLNKVMGVNEASRNFGIPSRTLRRHILSGKSKGPLGRKPVFSGEYEKKLVAHIKKLEKVGFAPDRKDVTEMAFQLAKKLNIKNPFSASSESAGNVWFSGFMTRNSELSQRKSEGLSLARAYGVNRKDVRDFFDLLAKIYEESDLAHHPEDIFNMDESGIQVNNKPGRVVATKGAKDVYTLTSSEKGENVTVIACCNAQGNFIPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINTDLFMQWFEEVFLRHKSSRRTLLILDGHSSHSNNIRLLEVAKENDVILLCLPSHTTHALQPLDRAFFRPLKVYFAQEAKTWMVRNKDKKLTSYDVSKLIGRAWGKAATVSNGVSALKSCGIYPFDPSAIPDHYFSLSDSLRDQNLVVEDEDGTSRESLSLLQEYDDSALLAFDTIHSSPQHIENDLEARTLGSLPVVTSEFQPEPGPSGLNLTNQNYENSLMAVVIEHTLPMQDAPVAEELHQMNIVLPITPRKHAEQCHIESESCLTIAKSNLIDLIEQTPEKQIGSTESEATPSKVLNDIHPVPKLPVVLSKRKQKAVILTSAENIEKRKVIADKKKPAAGKLKHAKPTKRIKTMKEKDNVKKKQEKGGKKKPKKRPVRNKNKKKESYSSSSESNDENEGRVDTSEEEMSDEHDDLNRCVECTENYYDTKSTEDWIQCPSCLSWLHEFCTMYNPMCNRCGRKAKKEAVNKNRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907821; iTF_01192595; iTF_01085098; iTF_01439841; iTF_00373890; iTF_01439842; iTF_00373891; iTF_01439843; iTF_01439844; iTF_00111557; iTF_00111558; iTF_00071335; iTF_00111559; iTF_00071336; iTF_00111560; iTF_01026024; iTF_00111561; iTF_01085097; iTF_00111562; iTF_01085099; iTF_00373911; iTF_01026009; iTF_01026010; iTF_00928603; iTF_01026011; iTF_00124175; iTF_01527044; iTF_01527045; iTF_00172705; iTF_00172706; iTF_00172707; iTF_00172708; iTF_00172709; iTF_00172710; iTF_00172711; iTF_00172712; iTF_00172713; iTF_00172714; iTF_00172715; iTF_00172716; iTF_00172717; iTF_00172718; iTF_00172719; iTF_00172720; iTF_00172721; iTF_00172722; iTF_00172723; iTF_00172724; iTF_00172725; iTF_00172726; iTF_00172727; iTF_00172698; iTF_00172699; iTF_00172700; iTF_00172701; iTF_00172702; iTF_00172703; iTF_00172704; iTF_00122318; iTF_00373889; iTF_01527042; iTF_01076358; iTF_01538674; iTF_01076377; iTF_00850589; iTF_00850592; iTF_00771820; iTF_00771821; iTF_00771822; iTF_00771823; iTF_00771824; iTF_00123293; iTF_00123294; iTF_00123295; iTF_00373886; iTF_00373887; iTF_00373888;
- 90% Identity
- iTF_01439841;
- 80% Identity
- -