Basic Information

Insect: Atethmia centrago
Gene Symbol: -
Assembly: GCA_905333075.2
Location: HG995374.1:28260870-28263083[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-09 3e-07 31.8 0.0 3 37 17 51 15 58 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-09	3e-07	31.8	0.0	3	37	17	51	15	58	0.93

Sequence Information

Coding Sequence: ATGTCTCGGAAGTATGAAAGAAGGACACTACGAGCATCATGGAGTGCGGACGACTTAGACAAAGCCATGCATAGTGTCCTAAGCAAAGTAATGGGTGTTAATGAGGCATCCAGAAACTTTGGCATACCGTCTCGGACTTTAAGAAGACACATTTTATCAGGAAAATCAAAGAGCCCTCTAGGACGAAAACCAGTATTTTCGGTAGAGcatgaaaaaaaactggttgCCCATATAAAGAAATTGGAAAAAGTTGGATTTGCCCCTGACAGAAAAGATGTAAAAGAAATGGCATTTCAATTAGCTAAGAAACTTACAATTAAAAACCCATTTTCAGCAAGTTCTGAATCAGCTGGAAATGTATGGTTTTCGGGGTTCATGGCTCGTAACTCAGAATTAAGtcaaagaaaatcagaaggctTGTCACTTGCTCGAGCTTATGGAGTTAATAGAAAAGATGTACAGGATTTTTTTGATTTACTAGCTAAAATctacgaagaaaatgattttgCAAATCACCCCGAAGATATTTTCAACATGGACGAGTCCGGCATACAGGTGAACAACAAGCCAGGAAAAGTAATTGCCACAAAGGGAGCCAAAGACGTCTACACGCTCACTAGCTCTGAAAAGGGTGAAAACGTAACGGTGATTGCTTGTTGTAATGCTCAAGGTAACTTTCTTCCCCCTGTTTTAATCTATAAGGGTACTTACAGCAAACCACAATTTTCCGAAGGTCTTCCTCCAGGATCACAGGTTTTCATGAACAAAAAATCTTCTTACATAAATACAGATCTCTTCATGCAATGGTTTGAAGAAGTGTTTCTGCGTCACAAGAGTCCTCGAAAAACATTGTTAATATTAGATGGTCACAGCTCGCACAGTAACAATATTCGCCTACTGGAAGTGGCTAAAGAAAATGGTGTTATTCTTTTGTGTCTACCAAGTCACACTACGCATGCTCTGCAGCCTCTTGATAGAGCCTTTTTTAGGCCATTGAAGGTGTACTTTGCCCAGGAAGCTAAGACTTGGATGGTTAGGAACAAGGAGAAGAAGTTGACACGCTATGACGTGTCTAAGTTAATCGGACGAGCTTGGGGCAAAGCTGCTACTGTTTCCAATGGTGTGTCAGCTTTAAAATCATGTGGAATTTATCCTTTTGATCCGAGTGCCATTCCTGATCACTATTTTTCACTATCTGATTCGCTGCGAGACCAAAATTTAGTTATTGAAGATGAGGATGGGACGTCAAGAGAGTCTCTGTCATTACTTCATGAATATGACGGTAGTGAGCTAATTGCCTTTGATACAATTCATTCATCACCGCAGCAGGTCATAAATGATTTAGAGCCCAGGACATTAGGATCACCACCTGTCGTTGTGAATGAGTTCCAATCTGAGCCAGGTCCTTCAGGACTACATCTAATTAATCCAAATTACGAAGATAGTTTGATGGAAGTAGTAACTGAACATTCATTGCCTGTGCAAGATGCACCTGTGGCAGAAGAGTTTGACCAAATGAATATCATATTGCCAAAAACACCACAAAAGTATCCGATACAATGTCGTATCGAGAGTGAGGCGTGTCTGACTATTGCGAAGTCTAATCTTATTGACTTGATTGAACAAACCCCTGAAAAACAAATAGGATCTACTGAGTCTGAAGCAACACCATCCAAAGTTTTGAATGAAATCCATCCAGTGCCTAAACTTCCTGTAGTATTGTCTAAGAGAAAACAAACAGCTGTTATTTTAACTTCTGATGAAAATATACAGAAACGGAAAGTAATTGCTGATAAGAAGAAACCAGCAGCTGAAAAATTAAAGCAGGCTAAgatcacaaaaagaattaaagcagtgaaagaaaaatatggtgtaaaaaagaaacaaaatggacaaaaacaaaatagaaagaaGGCAAAGAAAGGTCCTgtcagaaataagaaaaaagtaaGCTGGTCATCGTCTTCTGAAAGCAATGATGAAAACGAGGTTAGGGTAGATACTTCTGAAGAAGAAATCTCAGACGAACATGATGACGTTAACAGATGCGTTGAATGCACGGAAAATTATTATGACACACAATCCACTGAAGATTGGATTCAATGCCCGTCTTGTTTAACATGGTTGCATGAGTTTTGCACTATGTATAACCCAATGTGTAATCGTTGTGGACGCAAAGCCAAAAAGgaagctgttaaaaaaaatagagtgtaa
Protein Sequence: MSRKYERRTLRASWSADDLDKAMHSVLSKVMGVNEASRNFGIPSRTLRRHILSGKSKSPLGRKPVFSVEHEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLTIKNPFSASSESAGNVWFSGFMARNSELSQRKSEGLSLARAYGVNRKDVQDFFDLLAKIYEENDFANHPEDIFNMDESGIQVNNKPGKVIATKGAKDVYTLTSSEKGENVTVIACCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINTDLFMQWFEEVFLRHKSPRKTLLILDGHSSHSNNIRLLEVAKENGVILLCLPSHTTHALQPLDRAFFRPLKVYFAQEAKTWMVRNKEKKLTRYDVSKLIGRAWGKAATVSNGVSALKSCGIYPFDPSAIPDHYFSLSDSLRDQNLVIEDEDGTSRESLSLLHEYDGSELIAFDTIHSSPQQVINDLEPRTLGSPPVVVNEFQSEPGPSGLHLINPNYEDSLMEVVTEHSLPVQDAPVAEEFDQMNIILPKTPQKYPIQCRIESEACLTIAKSNLIDLIEQTPEKQIGSTESEATPSKVLNEIHPVPKLPVVLSKRKQTAVILTSDENIQKRKVIADKKKPAAEKLKQAKITKRIKAVKEKYGVKKKQNGQKQNRKKAKKGPVRNKKKVSWSSSSESNDENEVRVDTSEEEISDEHDDVNRCVECTENYYDTQSTEDWIQCPSCLTWLHEFCTMYNPMCNRCGRKAKKEAVKKNRV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00906049;
90% Identity: iTF_01439841;
80% Identity: iTF_00172706; iTF_00172707; iTF_00172708; iTF_00172709; iTF_00172710; iTF_00172711; iTF_00172712; iTF_00172713; iTF_00172714; iTF_00172715; iTF_00172716; iTF_00172717; iTF_00172718; iTF_00172719; iTF_00172720; iTF_00172721; iTF_00172722; iTF_00172723; iTF_00172724; iTF_00172725; iTF_00172726; iTF_00172698; iTF_00172699; iTF_00172700; iTF_00172701; iTF_00172702; iTF_00172703; iTF_00172704;