Ople019571.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997733.1:5177232-5179433[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-09 5e-07 30.6 0.0 3 37 15 49 13 55 0.93 2 2 6.4 2.7e+03 -0.6 0.0 22 30 140 148 126 149 0.74
Sequence Information
- Coding Sequence
- ATGAAAGAAGGACACTACGAACTACGAGCATCATGGAGTGCGGACGACTTAGACAAAGCCATGCGTAGTGTCCTAAGCAAAGTAATGGGTGTTAATGAGGCATCCAGAAACTTTGGCATACCGTCTCGAACTCTAAGAAGACACATTTTATCAGGAAAATCAAAGGGCCCTCTAGGACGCAAACCAGTATTTTCTGtagaatatgaaaaaaaactggttgCCCATATAAAGAAATTGGAAAAAGTTGGATTTGCCCCTGACAGAAAGGATGTAAAAGAAATGGCATTTCAACTAGCTAAgaaacttaatattaaaaacccATTTTCAGCAAGTTCAGAATCAGCTGGAAATGTATGGTTTTCGGGGTTCATGGCTCGCAACTCAGAATTAAGCCAAAGAAAATCAGAAGGCTTGTCACTTGCTCGAGCTTATGGAGTTAATAGAAAAGATGTACAGGATTTTTTTGATTTACTAGCCAAAATCTACGAAGAAAATGATTTTGCAAATCACCCCGAAGATATTTTCAACATGGACGAGTCCGGCATACAGGTGAACAACAAGCCAGGAAGAGTAATTGCCACAAAGGGAGCCAAAGATGTCTACACGCTCACTAGCTCTGAAAAGGGTGAAAACGTAACGGTCATTGCTTGTTGTAATGCTCAAGGTAACTTCCTTCCCCCTGTTTTAATCTATAAGGGTACTTACAGCAAACCACAATTTTCCGAAGGTCTTCCCCCAGGATCACAGGTTTTCATGAACAAAAAGTCTTCTTATATAAATACAGATCTCTTTATGCAATGGTTTGAAGAAGTGTTTCTGCGTCACAAGAGTCCTCgaaaaacattgttaatattaGATGGTCACAGCTCGCACAGTAACAATATTCGCCTACTGGAAGTGGCTAAAGAAAATGATGTTATTCTTTTGTGTCTACCAAGTCACACTACGCATGCTCTGCAGCCTCTTGATAGAGCCTTTTTTAGACCATTGAAGGTGTATTTTGCCCAGGAAGCGAAGTCATGGATGGTCAGGAACAAAGAGAAGAAGTTGACACGCTATGACGTATCTAAGTTAATCGGACGAGCTTGGGGCAAAGCTGCAACTGTTTCAAACGGTGTGTCAGCTTTAAAATCATGTGGAATTTATCCTTTTGATCCGAGTGCCATTCCTGATCACTATTTTTCACTATCTGATTCGTTGCGAGACCAAAATTTAGTTGTTGAAGATGAGGATGAGATGTCAAGAGAGTCTCTGTCATTACTTCATGAATATGACGATAGTGAACTAATTGCCTTTAATACAATCCATTCATCACCGCAGCAGGTCGTAAATGATTTAGAGCCCAGGACATTATCACCACCTGTCGTTGTGACTGAGTTCCAACCTGAGCCAGGTCCTTCAGGACTACATCTAACTAATCCAAATTACGAAGATAGTTTGATGGAAGTCGTAACTGAACATGCATTGCCTGTGCAAGATGCACTTGTGGCAGAAGAGTTTGATCAAATTAATCTCATATTGCCAAAAACACCACAAAAGTATCCGGTACAATGTCGTATCGAGAGTGAGGCGGGTCTGACTATTGCGAAATCTAATCTTATTGATTTGATTGAACAAACCCCTGAAAAGCAAATAGGATCTATTGAGTCTGAAGCAACACCATCCAAAGTTTTGAATGAAATCCATCCAGTGCCTAAACTTCCAGTTGTATTGTCTAAGAGAAAACAAACAGCTGTTATTTTAACTTCTGATGAAAATATAGAGAAACGGAAAGTAATTGCTGATAAAAAGAAACCAGCATCTGGAAAATTAAAGCAGGCTAAGaccacaaaaagaattaaagcAGTGAAAGAAAAAGAtggtgtaaaaaataaacaaaatggggGTATAAAGAAGCAAAAGAAAGGTCCTGTCagaaagaataagaaaaaagtaAGCTGGTCATCGTCTTCTGAAAGTAATGATGAAAACGAGGTTAGGGTAGATACTTCTGAAGAAGAAATCTCAGACGAACACGACGACGTTAACAGATGCGTTGAATGCACGGAAAATTATTATGACACACAATCCACTGAAGATTGGATTCAATGCCCGTCTTGTTTAACATGGTTGCATGAGTTTTGCACTATGTATAACCCAATGTGTAATCGTTGTGGACGGAAAGCCAAAAAGGAAgctgttaacaaaaaaaatagagtgtaa
- Protein Sequence
- MKEGHYELRASWSADDLDKAMRSVLSKVMGVNEASRNFGIPSRTLRRHILSGKSKGPLGRKPVFSVEYEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLNIKNPFSASSESAGNVWFSGFMARNSELSQRKSEGLSLARAYGVNRKDVQDFFDLLAKIYEENDFANHPEDIFNMDESGIQVNNKPGRVIATKGAKDVYTLTSSEKGENVTVIACCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINTDLFMQWFEEVFLRHKSPRKTLLILDGHSSHSNNIRLLEVAKENDVILLCLPSHTTHALQPLDRAFFRPLKVYFAQEAKSWMVRNKEKKLTRYDVSKLIGRAWGKAATVSNGVSALKSCGIYPFDPSAIPDHYFSLSDSLRDQNLVVEDEDEMSRESLSLLHEYDDSELIAFNTIHSSPQQVVNDLEPRTLSPPVVVTEFQPEPGPSGLHLTNPNYEDSLMEVVTEHALPVQDALVAEEFDQINLILPKTPQKYPVQCRIESEAGLTIAKSNLIDLIEQTPEKQIGSIESEATPSKVLNEIHPVPKLPVVLSKRKQTAVILTSDENIEKRKVIADKKKPASGKLKQAKTTKRIKAVKEKDGVKNKQNGGIKKQKKGPVRKNKKKVSWSSSSESNDENEVRVDTSEEEISDEHDDVNRCVECTENYYDTQSTEDWIQCPSCLTWLHEFCTMYNPMCNRCGRKAKKEAVNKKNRV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00906049;
- 90% Identity
- iTF_01439841;
- 80% Identity
- iTF_01085098;