Acen033806.1
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- -
- Assembly
- GCA_905333075.2
- Location
- HG995381.1:4846238-4848451[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-09 3e-07 31.8 0.0 3 37 17 51 15 58 0.93
Sequence Information
- Coding Sequence
- ATGTCTCGGAAGTATGAAAGAAGGACACTACGAGCATCATGGAGTGCGGACGACTTAGACAAAGCCATGCATAGTGTCCTAAGCAAAGTAATGGGTGTTAATGAGGCATCCAGAAACTTTGGCATACCGTCTCGGACTTTAAGAAGACACATTTTATCAGGAAAATCAAAGAGCCCTCTAGGACGAAAACCAGTATTTTCGGTAGAGcatgaaaaaaaactggttgCCCATATAAAGAAATTGGAAAAAGTTGGATTTGCCCCTGACAGAAAAGATGTAAAAGAAATGGCATTTCAATTAGCTAAGAAACTTACAATTAAAAACCCATTTTCAGCAAGTTCTGAATCAGCTGGAAATGTATGGTTTTCGGGGTTCATGGCTCGTAACTCAGAATTAAGtcaaagaaaatcagaaggctTGTCACTTGCTCGAGCTTATGGAGTTAATAGAAAAGATGTACAGGATTTTTTTGATTTACTAGCTAAAATctacgaagaaaatgattttgCAAATCACCCCGAAGATATTTTCAACATGGACGAGTCCGGCATACAGGTGAACAACAAGCCAGGAAAAGTAATTGCCACAAAGGGAGCCAAAGACGTCTACACGCTCACTAGCTCTGAAAAGGGTGAAAACGTAACGGTGATTGCTTGTTGTAATGCTCAAGGTAACTTTCTTCCCCCTGTTTTAATCTATAAGGGTACTTACAGCAAACCACAATTTTCCGAAGGTCTTCCTCCAGGATCACAGGTTTTCATGAACAAAAAATCTTCTTACATAAATACAGATCTCTTCATGCAATGGTTTGAAGAAGTGTTTCTGCGTCACAAGAGTCCTCGAAAAACATTGTTAATATTAGATGGTCACAGCTCGCACAGTAACAATATTCGCCTACTGGAAGTGGCTAAAGAAAATGGTGTTATTCTTTTGTGTCTACCAAGTCACACTACGCATGCTCTGCAGCCTCTTGATAGAGCCTTTTTTAGGCCATTGAAGGTGTACTTTGCCCAGGAAGCTAAGACTTGGATGGTTAGGAACAAGGAGAAGAAGTTGACACGCTATGACGTGTCTAAGTTAATCGGACGAGCTTGGGGCAAAGCTGCTACTGTTTCCAATGGTGTGTCAGCTTTAAAATCATGTGGAATTTATCCTTTTGATCCGAGTGCCATTCCTGATCACTATTTTTCACTATCTGATTCGCTGCGAGACCAAAATTTAGTTATTGAAGATGAGGATGGGACGTCAAGAGAGTCTCTGTCATTACTTCATGAATATGACGGTAGTGAGCTAATTGCCTTTGATACAATTCATTCATCACCGCAGCAGGTCATAAATGATTTAGAGCCCAGGACATTAGGATCACCACCTGTCGTTGTGAATGAGTTCCAATCTGAGCCAGGTCCTTCAGGACTACATCTAATTAATCCAAATTACGAAGATAGTTTGATGGAAGTAGTAACTGAACATTCATTGCCTGTGCAAGATGCACCTGTGGCAGAAGAGTTTGACCAAATGAATATCATATTGCCAAAAACACCACAAAAGTATCCGATACAATGTCGTATCGAGAGTGAGGCGTGTCTGACTATTGCGAAGTCTAATCTTATTGACTTGATTGAACAAACCCCTGAAAAACAAATAGGATCTACTGAGTCTGAAGCAACACCATCCAAAGTTTTGAATGAAATCCATCCAGTGCCTAAACTTCCTGTAGTATTGTCTAAGAGAAAACAAACAGCTGTTATTTTAACTTCTGATGAAAATATACAGAAACGGAAAGTAATTGCTGATAAGAAGAAACCAGCAGCTGAAAAATTAAAGCAGGCTAAgatcacaaaaagaattaaagcagtgaaagaaaaatatggtgtaaaaaagaaacaaaatggacaaaaacaaaatagaaagaaGGCAAAGAAAGGTCCTgtcagaaataagaaaaaagtaaGCTGGTCATCGTCTTCTGAAAGCAATGATGAAAACGAGGTTAGGGTAGATACTTCTGAAGAAGAAATCTCAGACGAACATGATGACGTTAACAGATGCGTTGAATGCACGGAAAATTATTATGACACACAATCCACTGAAGATTGGATTCAATGCCCGTCTTGTTTAACATGGTTGCATGAGTTTTGCACTATGTATAACCCAATGTGTAATCGTTGTGGACGCAAAGCCAAAAAGgaagctgttaaaaaaaatagagtgtaa
- Protein Sequence
- MSRKYERRTLRASWSADDLDKAMHSVLSKVMGVNEASRNFGIPSRTLRRHILSGKSKSPLGRKPVFSVEHEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKLTIKNPFSASSESAGNVWFSGFMARNSELSQRKSEGLSLARAYGVNRKDVQDFFDLLAKIYEENDFANHPEDIFNMDESGIQVNNKPGKVIATKGAKDVYTLTSSEKGENVTVIACCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINTDLFMQWFEEVFLRHKSPRKTLLILDGHSSHSNNIRLLEVAKENGVILLCLPSHTTHALQPLDRAFFRPLKVYFAQEAKTWMVRNKEKKLTRYDVSKLIGRAWGKAATVSNGVSALKSCGIYPFDPSAIPDHYFSLSDSLRDQNLVIEDEDGTSRESLSLLHEYDGSELIAFDTIHSSPQQVINDLEPRTLGSPPVVVNEFQSEPGPSGLHLINPNYEDSLMEVVTEHSLPVQDAPVAEEFDQMNIILPKTPQKYPIQCRIESEACLTIAKSNLIDLIEQTPEKQIGSTESEATPSKVLNEIHPVPKLPVVLSKRKQTAVILTSDENIQKRKVIADKKKPAAEKLKQAKITKRIKAVKEKYGVKKKQNGQKQNRKKAKKGPVRNKKKVSWSSSSESNDENEVRVDTSEEEISDEHDDVNRCVECTENYYDTQSTEDWIQCPSCLTWLHEFCTMYNPMCNRCGRKAKKEAVKKNRV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00906049;
- 90% Identity
- iTF_01439841;
- 80% Identity
- iTF_00172705;