Basic Information

Insect: Hebomoia glaucippe
Gene Symbol: -
Assembly: GCA_025727935.1
Location: JAOSYY010000010.1:4109186-4120681[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.9e-05 0.0048 17.5 2.2 1 23 431 453 431 453 0.97

2 18 0.00024 0.017 15.8 1.5 1 20 459 478 459 481 0.94

3 18 0.00046 0.032 14.9 2.9 1 23 500 522 500 522 0.98

4 18 0.00016 0.011 16.4 4.7 1 23 528 550 528 550 0.99

5 18 3.1e-05 0.0021 18.6 5.3 1 23 556 578 556 578 0.97

6 18 9.8e-06 0.00068 20.2 7.3 1 23 584 606 584 606 0.97

7 18 6e-07 4.1e-05 24.0 3.3 1 23 612 634 612 634 0.97

8 18 8.8e-05 0.0061 17.2 6.7 1 23 640 662 640 662 0.97

9 18 8.7e-05 0.006 17.2 6.5 1 23 668 690 668 690 0.97

10 18 4.2e-07 2.9e-05 24.5 1.9 1 23 696 718 696 718 0.98

11 18 4.3e-05 0.003 18.2 7.9 1 23 724 746 724 746 0.98

12 18 3e-06 0.00021 21.8 7.6 1 23 752 774 752 774 0.98

13 18 5.5e-06 0.00038 21.0 7.8 1 23 780 802 780 802 0.97

14 18 2.6e-06 0.00018 22.0 6.0 1 23 808 830 808 830 0.98

15 18 1.5e-06 0.0001 22.8 7.8 1 23 836 858 836 858 0.98

16 18 3.1e-06 0.00021 21.8 4.7 1 23 864 886 864 886 0.96

17 18 0.00063 0.044 14.5 0.3 1 23 893 915 893 915 0.96

18 18 0.018 1.2 10.0 5.6 1 23 923 945 923 945 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.9e-05	0.0048	17.5	2.2	1	23	431	453	431	453	0.97
2	18	0.00024	0.017	15.8	1.5	1	20	459	478	459	481	0.94
3	18	0.00046	0.032	14.9	2.9	1	23	500	522	500	522	0.98
4	18	0.00016	0.011	16.4	4.7	1	23	528	550	528	550	0.99
5	18	3.1e-05	0.0021	18.6	5.3	1	23	556	578	556	578	0.97
6	18	9.8e-06	0.00068	20.2	7.3	1	23	584	606	584	606	0.97
7	18	6e-07	4.1e-05	24.0	3.3	1	23	612	634	612	634	0.97
8	18	8.8e-05	0.0061	17.2	6.7	1	23	640	662	640	662	0.97
9	18	8.7e-05	0.006	17.2	6.5	1	23	668	690	668	690	0.97
10	18	4.2e-07	2.9e-05	24.5	1.9	1	23	696	718	696	718	0.98
11	18	4.3e-05	0.003	18.2	7.9	1	23	724	746	724	746	0.98
12	18	3e-06	0.00021	21.8	7.6	1	23	752	774	752	774	0.98
13	18	5.5e-06	0.00038	21.0	7.8	1	23	780	802	780	802	0.97
14	18	2.6e-06	0.00018	22.0	6.0	1	23	808	830	808	830	0.98
15	18	1.5e-06	0.0001	22.8	7.8	1	23	836	858	836	858	0.98
16	18	3.1e-06	0.00021	21.8	4.7	1	23	864	886	864	886	0.96
17	18	0.00063	0.044	14.5	0.3	1	23	893	915	893	915	0.96
18	18	0.018	1.2	10.0	5.6	1	23	923	945	923	945	0.99

Sequence Information

Coding Sequence: ATGAATCCGGATCATCATAATATCAATACGGGAGGGGGCCAGCCTCCAGGGAATTCTGAGTCCCAGAATCAAAGAGTACAATCAGCTCAACAGCAGCAAAATAGTCTTACACCTACAACATCTGCAACTGACCTACGGGTTAATTCGGCAGCTGTAAACGTCGCTTTGTCTAGCGTTGCCAAATATTGGGTGTTTACAAATTTATTTCCTGGACCTATACCGCAAGTTTCGGTTTATGGGCTACCGGCAAGCGCCAGGATTGAAAATGGAAAACCTGTACAGGATCTAGGACAAGGTCATGCAAGTATACTTAATGGAGATCCAAACATTATATTGGGTCACCATAGTAGTCAACCTCAGGTCACAGTGTCAGCGGGGGGTCAACAAATTCCTATATCACAAATAATAACAACTCAATCTGGCCAAGGACATGAATCTATGGTGGCACACAATCAGCAACAAGAATTATCAGTCCAGCAGTCATCCAGTGGATCATCACAGGGGTCCATAAGCAGCCAGCATCAGCAGGTACCCAATAATCGGGTCGAGTTTGTTCACCATAACATTGATATGGGTCATCATTCACAACAACATCTATTGCAACAGCAACTGATAGCAGCCCGTCCTGAACACTCCAACCAGCAGATACAACTGACAGTAAGTGAAGATGGCATTGTGACTGTTGTTGAACCTGGTGGAGGTAAGATGGTGGACAAGGATGATCTCCATGAAACCATTAAGATGCCCTCAGACCACACACTCACTGTACATCAATTGCAACAGATTGTAGGACATCATCAGGTGATAGATAGTGTTGTTCGCATCGAGCAAGCTACAGGAGAGCCAGCCAATATACTCGTCACACAAAACCCTGATGGTACCACCTCCATAGAAACGAGTGCCGCGGACCCGCTCTTAGTGAAAGATGAGAAAAATGTTGCCAAGATTGAAGCGGGACAATTTGCTACACCGGCTGATATAAAGGATATAAAAGGGATAGATTTAAAGGGTGTAGGTAGTATGGGCGTCGAGGGCGCCGTGGTAAAAATATCTGGTGGAGCGACCGATCACGATTTGCACGCAATGTACAAAGTGAACGTAGAGGATCTATCGCAGTTGCTAGCCTATCATGAGGTGTTTGGTAAACTTAATACTGAGGCGCAGCAAGCGCAGCAGCAGCAACCGCAACAACAACAGCAAACACAGCCGACTAAGCCAGTTTTGTACGAAGTGGATTTAGAAGCAGGAACGAGTGCAGCCTTGTCTGAGACAGAAGCGTCTCCTGGACATCACTCTTGCGATATTTGTGGAAAAATATTCCAATTTCGATATCAGCTTATTGTTCACAGACGATATCATGGAGAAAACAAACCATATACGTGTCAAGTGTGCGGCAATGCTTTCTCTAATCCATCCGAATTATCGAAACATGGAAAGTGTCATCTAGCTGGTGATCCTGCGGAACGACAGGCAAAACGGCTGGCACAAGACAAACCGTACGCATGTACAACCTGCCAGAAGACCTTTTGGCGCAAAGAGCACCTTGACAACCACGTCCGAACACATACTGGGGAGACTCCCTATCGGTGTCAATTTTGTGCCAaaacattcacgcgtaaagagcatatggtgaaccacgtgaggaagcatacgggtgaaactccacatcgttgcgagatttgtaagaaaagtttcacgcgaaaggaacacttcatgaaccacgtcatgtggcatacggGTGAAACGCCGCATCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGCTCGCATACGAACGACACGCCTTTCCGATGCGAACAATGCGGCAAGTCGTTTACGAGAAAGGAACACTTCACCAATCACATTTTGTGGCATTCCGGCGAAACACCCCATCGCTGCGACTTCTGTTCGAAGACGTTTACCCGGAAAGAACACTTATTGAACCACGTTCGACAACACACTGGGGAGTCGCCTCATCGATGTAACTTCTGCTCGAAGTCATTTACAAGGCGCGAGCACCTCGTTAACCATGTACGCCAgcacacaggcgagactcccttccaatgtggctactgtccgaaagcattcacaagaaaggatcatttaGtgaaccatgtccgtcaacataccggcgagtctccgcataagtgttcgttttgcacgaagtccttcacgcgcaaggaacacttgactaatcatgtgcgacaacacacaggcgagtcgccgcatcggtgcacatattgctcgaagtcattcactaggaaggagcacctcactaatcatatcagacaacataccggcgagactccgttccggtgtacatactgtactaagtctttctcacgcaaggagcatcttactaatcacatgcatttgcatactggagaaacaccacataagtgccccttctgcacgaagaccttctctaggaaagaacacctcaccaatcatgtgcgaatacatacgggcgagtcacctcaccgatgcgaatactgcaataaaacttttactcgcaaggagcacctgaccaatcacatgaagCAACACACCGGCGACTCACCGCATGCTTGCAAAGTGTGCTCCAAACCATTTACCAGGAAGGAACATCTAATGACACATATGAGATCACATAGTTGTGGCGAAAGACCGTTCAGCTGTGGTGAATGTGGCAAATCATTTCCACTGAAAGGAAATCTTCTATTCCATGAAAGGTCACATAACAAGGGATCATCCAAAATATTCAAATGTGATGTATGTTCAAAAGAATTTATGTGCAAAGGACATTTAGTAACACATCGTCGTACGCACACCAGTACTGGTGAGAATAATACAAATGAAGAGAATCCACCAGAGACTGAGAATTGCTTGACTGACTGCAGTAATACTTTTGAGAAGGATCCACTGGAAATTGACAGAAAACCTGATATTAGACCACCTTCAGAAAACAGAGTAACTGAAAATTCAGTTTCTCAACCTCAGAATAACACTGTAATGCAAATTACAACACAGCAAGTGCGTGCAACAGCTCCAACAAGCGCAGCCAATGTCTCTGCTGGCACGTTTACTTCAACGCAACACCACACCGCCGCCATTGCGCACCACCCGGTCACCGTCAACTACTAA
Protein Sequence: MNPDHHNINTGGGQPPGNSESQNQRVQSAQQQQNSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPASARIENGKPVQDLGQGHASILNGDPNIILGHHSSQPQVTVSAGGQQIPISQIITTQSGQGHESMVAHNQQQELSVQQSSSGSSQGSISSQHQQVPNNRVEFVHHNIDMGHHSQQHLLQQQLIAARPEHSNQQIQLTVSEDGIVTVVEPGGGKMVDKDDLHETIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLLVKDEKNVAKIEAGQFATPADIKDIKGIDLKGVGSMGVEGAVVKISGGATDHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEAQQAQQQQPQQQQQTQPTKPVLYEVDLEAGTSAALSETEASPGHHSCDICGKIFQFRYQLIVHRRYHGENKPYTCQVCGNAFSNPSELSKHGKCHLAGDPAERQAKRLAQDKPYACTTCQKTFWRKEHLDNHVRTHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCEQCGKSFTRKEHFTNHILWHSGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHIRQHTGETPFRCTYCTKSFSRKEHLTNHMHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEYCNKTFTRKEHLTNHMKQHTGDSPHACKVCSKPFTRKEHLMTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGSSKIFKCDVCSKEFMCKGHLVTHRRTHTSTGENNTNEENPPETENCLTDCSNTFEKDPLEIDRKPDIRPPSENRVTENSVSQPQNNTVMQITTQQVRATAPTSAANVSAGTFTSTQHHTAAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01203426; iTF_01205894; iTF_00879016; iTF_01202636; iTF_00115123; iTF_00874676; iTF_00875535; iTF_00876408; iTF_01206741; iTF_01562166; iTF_00430839; iTF_01204247; iTF_00357850; iTF_00358823; iTF_00710396; iTF_00711181;
90% Identity: -
80% Identity: -