Basic Information

Insect: Leptidea juvernica
Gene Symbol: -
Assembly: GCA_949711685.1
Location: CATIXL010000001.1:25576887-25607520[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.9e-05 0.0083 17.8 1.5 1 23 428 450 428 450 0.97

2 16 0.00031 0.044 15.5 1.0 1 20 456 475 456 478 0.94

3 16 0.001 0.14 13.9 4.8 1 23 497 519 497 519 0.98

4 16 6.6e-05 0.0092 17.6 5.7 1 23 525 547 525 547 0.99

5 16 4.4e-05 0.0062 18.2 5.1 1 23 553 575 553 575 0.97

6 16 5.8e-07 8.1e-05 24.1 5.2 1 23 581 603 581 603 0.98

7 16 1e-05 0.0014 20.2 2.8 1 23 609 631 609 631 0.97

8 16 8.1e-05 0.011 17.3 6.7 1 23 637 659 637 659 0.97

9 16 3.6e-05 0.0051 18.4 4.8 1 23 665 687 665 687 0.97

10 16 3.9e-07 5.5e-05 24.6 1.9 1 23 693 715 693 715 0.98

11 16 3.8e-05 0.0053 18.4 8.1 1 23 721 743 721 743 0.98

12 16 1.9e-07 2.7e-05 25.6 6.7 1 23 749 771 749 771 0.98

13 16 3e-06 0.00042 21.9 0.8 1 23 778 800 778 800 0.98

14 16 2.2e-05 0.0031 19.1 6.9 1 23 806 828 806 828 0.97

15 16 2.4e-05 0.0034 19.0 7.1 1 23 834 856 834 856 0.98

16 16 2.4e-06 0.00033 22.2 2.0 1 21 862 882 862 882 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.9e-05	0.0083	17.8	1.5	1	23	428	450	428	450	0.97
2	16	0.00031	0.044	15.5	1.0	1	20	456	475	456	478	0.94
3	16	0.001	0.14	13.9	4.8	1	23	497	519	497	519	0.98
4	16	6.6e-05	0.0092	17.6	5.7	1	23	525	547	525	547	0.99
5	16	4.4e-05	0.0062	18.2	5.1	1	23	553	575	553	575	0.97
6	16	5.8e-07	8.1e-05	24.1	5.2	1	23	581	603	581	603	0.98
7	16	1e-05	0.0014	20.2	2.8	1	23	609	631	609	631	0.97
8	16	8.1e-05	0.011	17.3	6.7	1	23	637	659	637	659	0.97
9	16	3.6e-05	0.0051	18.4	4.8	1	23	665	687	665	687	0.97
10	16	3.9e-07	5.5e-05	24.6	1.9	1	23	693	715	693	715	0.98
11	16	3.8e-05	0.0053	18.4	8.1	1	23	721	743	721	743	0.98
12	16	1.9e-07	2.7e-05	25.6	6.7	1	23	749	771	749	771	0.98
13	16	3e-06	0.00042	21.9	0.8	1	23	778	800	778	800	0.98
14	16	2.2e-05	0.0031	19.1	6.9	1	23	806	828	806	828	0.97
15	16	2.4e-05	0.0034	19.0	7.1	1	23	834	856	834	856	0.98
16	16	2.4e-06	0.00033	22.2	2.0	1	21	862	882	862	882	0.97

Sequence Information

Coding Sequence: ATGAATCAGGACCACCACAGTATCAGTGGAGGTAGTGGACAGACTTCAACCAATTCAGAGGGCCAAAGAGTACAATCTGGCCAGCAACAACAGCAAGCCCCAACCACTTCTGCAACAGACCTAAGAGTTAACTCGGCAGTAAATGTTGCGTTATCGAGCGTTGCCAAGTACTGGGTGTTTACAAATTTGTTTCCCGGTCCAATACCACAAGTCTCTCTGTATGGGCTACCTGCAAGCACTAGAATTGAAAATGGGAAACCTGTACAGgaTCTTGGCCAATCACATGCTAGCTTACTTAATGGTGATCCTAATATTATTCTGGGACATCATAGTGGTCAACCACAAGTTACAGTGTCAGCCGCTGGGGGTCAACAAATACCTATATCTCAATTAATTACTACTCAGTCTGGACAAGGACATGATTCTCTGGTGTCCCATAGTCAACAAGAAATGTCCTCACAACAGAACTCAAGTAGTTCTCAAGTGACTGTTAACTCTCAGTCAGCCCATCAACAGCCCAGTAATCGCCTGGAGTTTGTGCAACATCATGGCTTAGATATgggtCATCATACACAAAATCATTTGTTGCAACAACAACTTCTAGCAGCAACAAGACCCGAACATTCCAACCAACagATTCAACTTACTGTGAGTGAGGATGGCATCGTAACAGTTGTGGAACCTGGCAGCAGCAAGTTGATGGAAAAGGATGATCTCCATGATTCCATCAAAATGCCTTCGGACCACACCCTCACTGTGCATCAGTTGCAACAGATTGTGGGACACCACCAGGTCATAGACAGTGTGGTCCGTATAGAGCAGGCTACCGGAGAACCTGCCAACATACTAGTGACTCAGAACCCAGATGGCACCACGTCGATAGAGACGAGCGCCGCTGACTCCCTCATTGTAAAAGATGAGAAGAATGTTAAAATTGAATCTGCACAGTATGCTGCGGCTTCGGATATTAAGGAAATTAAAGGAATTGATTTGAAGAGTGTTGGTGCAATGGGTATGGAAGGGGCTGTAGTGAAGATATCGGGAGGTGGCACAGACAATGATATGCATGCCATGTACAAGGTGAATGTAGAGGACCTATCACAACTCCTAGCCTACCATGAGGTGTTTGGAAAACTCAATACAGATTCCCAGCAAACACAGCAGGCACAGACACCACCACAACAGCCACAAGCTAAGCAGCCGGTGATGTACCAAGTGGACGTAGAAGCCAGTACGAGCGCATCCGCGACGCTCCCCGACACGGAGTCATCTTCCGGGCCACACCCATGTGACCTCTGCAATAAGATATTCGCCTACCGCTATCAGCTTATTGTACATAGGCGCTATCATGGTGAAAATAAACCTTACACCTGTCAAGTTTGCGGCCAGGCATTCGCCAATCCGACGGAACTGTCTAAACATGGAAAATGTCACCTTGCTGGCGAATCAGCGGAACGTCAAGCAAAGCGATTGGCTCAAGACAAGCCTTACGCGTGCTCCACGTGCCACAAGACGTTCTGGAGGAAGGAGCACCTGGACAATCACGTGCGCACACACACCGGGGAAACTCCATACagATGTCAGTTCTGCTCCAAAACGTTCACGCGCAAGGAACACATGGTGAACCACGTGCGGAAACATACGGGCGAGACTCCGCATCGCTGCGATATCTGTAAGAAGAGTTTCACTAGGAAGGAGCACTTCTTGAACCACGTCATGTGGCACACAGGTGAAACGCCGCACCAATGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCGCATACGAACGACACGCCGTTCAGATGCGAACTGTGCAGCAAGGCCTTCACCAGAAAGGAACATTTCACCAACCACATATTGTGGCACTCGGGCGAGACACCGCACCGTTGCGACTTCTGCTCGAAGACGTTCACCCGCAAGGAGCACCTCCTGAACCACGTGCGGCAACACACAGGCGAGTCGCCTCACCGCTGCGACTACTGCGCCAAGTCGTTCACGCGGAGGGAACACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGTGGCTACTGTCCTAAGGCATTTACTAGGAAGGACCATCTGGTGAACCACGTCCGGCAGCACACAGGCGAGTCGCCACATAAGTGCACGTTCTGCACCAAGTCGTTCACGCGCAAGGAGCACCTCACTAACCACGTGCGGCAGCACACGGGAGAGTCTCCGCACCGCTGCACCTACTGCGGCAAGTCCTTCACCAGGAAGGAGCATCTCACCAACCACATAAGACAGCATACGGGCGAGAGTCCTCCACACAAGTGCTCGCTGTGCCCGCGCGCGTTCGTGCGCAAGGAGCAACTCAACGTGCACGTGCGCGTGCATACGGGCGAATCGCCGCACGTTTGCTCCTACTGTAACAAGAATTTCACGAGGAAAGAGCATCTTAAGAACCATGAGAGACAACATACAGGCGAGACCCCGTTCAAGTGCACTTTCTGCACCAAGGCGTTCTCCCGCAAGGAACACCTGACCAACCACATGCACCTTCACACAGGAGAGACGCCCTACAAGTGTCCTTTCTGCACCAAGGTGTTCTCCAGGAAGGAACATCTGACCAACCATGTTCGGTGCTCCCTCGGGAGCTTAGCGCTCCAATCAGACTACGGCTGCGCCTACAGCGCTGAAAGAGTCATCCTCGCTGGATCTTTCCATCCTGATCGAATGGCTTCCATGACGATGCCTGGACGCTACCTATCCAGAAGGGAGATACCAAGCCTACCACCTGCACCTAGCAGAACCACACGAAATCGCGTGCGAGCCGAGGCTAGAAAACGAGGATAA
Protein Sequence: MNQDHHSISGGSGQTSTNSEGQRVQSGQQQQQAPTTSATDLRVNSAVNVALSSVAKYWVFTNLFPGPIPQVSLYGLPASTRIENGKPVQDLGQSHASLLNGDPNIILGHHSGQPQVTVSAAGGQQIPISQLITTQSGQGHDSLVSHSQQEMSSQQNSSSSQVTVNSQSAHQQPSNRLEFVQHHGLDMGHHTQNHLLQQQLLAATRPEHSNQQIQLTVSEDGIVTVVEPGSSKLMEKDDLHDSIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADSLIVKDEKNVKIESAQYAAASDIKEIKGIDLKSVGAMGMEGAVVKISGGGTDNDMHAMYKVNVEDLSQLLAYHEVFGKLNTDSQQTQQAQTPPQQPQAKQPVMYQVDVEASTSASATLPDTESSSGPHPCDLCNKIFAYRYQLIVHRRYHGENKPYTCQVCGQAFANPTELSKHGKCHLAGESAERQAKRLAQDKPYACSTCHKTFWRKEHLDNHVRTHTGETPYRCQFCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFLNHVMWHTGETPHQCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCSKAFTRKEHFTNHILWHSGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCDYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCGKSFTRKEHLTNHIRQHTGESPPHKCSLCPRAFVRKEQLNVHVRVHTGESPHVCSYCNKNFTRKEHLKNHERQHTGETPFKCTFCTKAFSRKEHLTNHMHLHTGETPYKCPFCTKVFSRKEHLTNHVRCSLGSLALQSDYGCAYSAERVILAGSFHPDRMASMTMPGRYLSRREIPSLPPAPSRTTRNRVRAEARKRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00771241;
90% Identity: iTF_00876408;
80% Identity: -