Basic Information

Insect: Zerene cesonia
Gene Symbol: -
Assembly: GCA_012273895.1
Location: CM022617.1:6471548-6487442[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.7e-05 0.0038 17.5 2.2 1 23 413 435 413 435 0.97

2 20 0.00078 0.052 13.9 1.5 1 20 441 460 441 463 0.94

3 20 0.00089 0.059 13.7 4.8 1 23 482 504 482 504 0.98

4 20 1.2e-05 0.00076 19.7 5.6 1 23 510 532 510 532 0.99

5 20 2.5e-05 0.0017 18.6 5.3 1 23 538 560 538 560 0.97

6 20 8.1e-06 0.00054 20.1 7.3 1 23 566 588 566 588 0.97

7 20 2.5e-07 1.6e-05 24.9 2.5 1 23 594 616 594 616 0.97

8 20 7.3e-05 0.0048 17.1 6.7 1 23 622 644 622 644 0.97

9 20 7.2e-05 0.0047 17.2 6.5 1 23 650 672 650 672 0.97

10 20 3.5e-07 2.3e-05 24.4 1.9 1 23 678 700 678 700 0.98

11 20 3.5e-05 0.0023 18.1 7.9 1 23 706 728 706 728 0.98

12 20 5.7e-06 0.00037 20.6 6.6 1 23 734 756 734 756 0.98

13 20 1e-06 6.8e-05 23.0 2.8 1 23 762 784 762 784 0.99

14 20 1.1e-05 0.00071 19.7 6.1 1 23 790 812 790 812 0.96

15 20 7.9e-06 0.00052 20.2 7.0 1 23 818 840 818 840 0.98

16 20 2.2e-06 0.00014 21.9 6.0 1 23 846 868 846 868 0.98

17 20 4.8e-05 0.0032 17.7 6.5 3 23 876 896 876 896 0.98

18 20 7.6e-06 0.0005 20.2 3.2 1 23 902 924 902 924 0.96

19 20 0.00052 0.034 14.4 0.3 1 23 931 953 931 953 0.96

20 20 0.014 0.92 10.0 5.6 1 23 962 984 962 984 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.7e-05	0.0038	17.5	2.2	1	23	413	435	413	435	0.97
2	20	0.00078	0.052	13.9	1.5	1	20	441	460	441	463	0.94
3	20	0.00089	0.059	13.7	4.8	1	23	482	504	482	504	0.98
4	20	1.2e-05	0.00076	19.7	5.6	1	23	510	532	510	532	0.99
5	20	2.5e-05	0.0017	18.6	5.3	1	23	538	560	538	560	0.97
6	20	8.1e-06	0.00054	20.1	7.3	1	23	566	588	566	588	0.97
7	20	2.5e-07	1.6e-05	24.9	2.5	1	23	594	616	594	616	0.97
8	20	7.3e-05	0.0048	17.1	6.7	1	23	622	644	622	644	0.97
9	20	7.2e-05	0.0047	17.2	6.5	1	23	650	672	650	672	0.97
10	20	3.5e-07	2.3e-05	24.4	1.9	1	23	678	700	678	700	0.98
11	20	3.5e-05	0.0023	18.1	7.9	1	23	706	728	706	728	0.98
12	20	5.7e-06	0.00037	20.6	6.6	1	23	734	756	734	756	0.98
13	20	1e-06	6.8e-05	23.0	2.8	1	23	762	784	762	784	0.99
14	20	1.1e-05	0.00071	19.7	6.1	1	23	790	812	790	812	0.96
15	20	7.9e-06	0.00052	20.2	7.0	1	23	818	840	818	840	0.98
16	20	2.2e-06	0.00014	21.9	6.0	1	23	846	868	846	868	0.98
17	20	4.8e-05	0.0032	17.7	6.5	3	23	876	896	876	896	0.98
18	20	7.6e-06	0.0005	20.2	3.2	1	23	902	924	902	924	0.96
19	20	0.00052	0.034	14.4	0.3	1	23	931	953	931	953	0.96
20	20	0.014	0.92	10.0	5.6	1	23	962	984	962	984	0.99

Sequence Information

Coding Sequence: atgaaccaGGATCACCATAGTATCAACGCGGGTGGCGGCCAACCCCCAGGCAATACGGAGTCTCAAAATCAGAGAGTTCAGTCAGCTCAACAGCAGCAACAGAATAATCTTACTCCTACTACATCTGCTACTGACCTACGGGTCAACTCGGCAGCTGTGAATGTTGCTTTGTCGAGCGTCGCAAAATATTGGGTGTTTACAAATTTGTTTCCCGGTCCATTACCCCAAGTATCTGTGTATGGCCTACCAGCCAATACTAGGATTGAAAATGGGAAACCTGTGCAGGATCTCGGACAAGCACATGCTAGTATACTCAATGGAGatcctaatataatattaggtcATCACTCAGGCCAGCCACAGGTCACAGTGTCTGCTGGTGGTCAACAGATACCCATATCTCAAATAATAACGACTCAATCAGGACAAGCTCAtgaagCTCTTGTGGCGCACAATCAGCAACAAGAGCTCACTGCGCAGCAAGCCTCATCTGGTGCTTCACAGGTGTCGGTTGGTTCAGGGCAGGCTTCTCACCAGCAGCAACACCTACTTCAACAGCAGTTGATGGCAGCCCGTCCTGAACATGCCAACCAACAGATTCAACTGACAGTAAGTGAAGATGGCATTGTTACTGTGGTGGAACCAGGTGGAGGGAAGCTTGTGGACAAAGATGAACTACATGAAACTATCAAGATGCCTACTGACCACACCCTCACTGTGCATCAGTTGCAACAGATTGTTGGTCATCATCAGgTAATAGACAGTGTGGTTCGCATCGAACAAGCTACTGGTGAACCAGCAAATATATTGGTTACACAAAACCCAGATGGGACGACTTCTATAGAAACAAGTGCAGTAGACCCCTTGTTAGTGAAGGATGAGAAGAATGTTGCTAAAATTGAAGCGGCACAGTTTGCTGCACCCActgaaataaaagatattaaagGGATAGATTTAAAGagtGTTGGTACAATGGGCATGGAAGGTGCAGTGGTAAAGATATCTGCAGCTGCTTCAGACCATGACTTGCATGCTATGTACAAAGTTAATGTTGAGGATCTATCTCAACTTCTTGCATATCATGAGGTTTTCGGGAAACTTAACTCAGAGGCGCAACAACCCCAGCAACAACAACCGCAGCAACAAACGCAACAGGCTAAGccTGTCTTATATGAAGTGGAGATAGAAGCAGGAACCAGTGCAACTATGTCAGAAGCTGAGGCGTCTCCTGGCCATCACTCCTGTGATATTTGTGGAAAAATATTCCAATTCCGATATCAACTGATTGTCCATAGgcGATATCATGGAGAAAATAAACCATACACATGTCAAGTATGTGGAAATGCCTTTTCCAATCCCACAGAACTATCAAAACATGGCAAATGCCATTTGgCTGGTGACCTTGCAGAGAGGCAAGCAAAACGTCTTTCCCAAGACAAGCCGTATGCATGCTCCACATGTCACAAGACTTTCTGGCGTAAGGAGCATTTAGATAACCATGTACGGACCCACACTGGAGAGACACCCTACAGATGTCAATACTGTTCAAAAACATTTACGCGCAAGGAACACATGGTCAATCACGTAAGGAAACACACGGGCGAAACGCCGCACCGCTGCGAGATTTGCAAGAAGAGCTTTACAAGAAAAGAGCATTTTATGAACCATGTCATGTGGCATACTGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGCTCGCATACTAACGACACGCCGTTCCGATGCGAAGTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATATTGTGGCACTCTGGTGAAACCCCCCATCGATGCGACTTTTGTTCGAAAACGTTCACGCGCAAGGAGCATCTGCTGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTCACGCGGCGCGAACACTTGGTGAACCACGTGCGGCAACACACGGGCGAGACGCCCTTCCAGTGCGGATACTGTCCGAAGGCGTTTACAAGGAAGGATCATTTagtTAACCACGTCCGGCAACACACCGGCGAGTCTCCGCACAAATGTTCTTTCTGCACGAAGTCCTTTACGCGCAAAGAGCACCTGACTAATCATGTTCGACAACACACGGGCGAATCGCCACACCGGTGTACATATTGTGCTAAATCCTTCACTAGAAAAGAACATCTCACTAATCATATcagACAGCATACGGGGGAGGCTCCATACAAGTGTACGCTATGTCCCCGTGGGTTCGTGCGGAAGGAACATCTTAAAACGCACGTGCGCACGCACACGGGCGAATCGCCGCACGCGTGCACGTATTGCAGCAAGACATTCACGAGGAAGGAACACCTTAACAATCATGTGCGACAACACACGGGCGAGACGCCGTTCAAGTGCACGTACTGCGTGAAGTCGTTCTCACGCAAGGAGCACCTCACGAACCACATGCACCTGCACACGGGTGAGACGCCACATAAGTGTCCCTTCTGCACCAAGACGTTCTCCAGGAAGGAGCACCTAACTAATCACGTGCGAATACATACTGGCGAATCACCTCACTGGTGTCAATTCTGCAAGAAAACGTTTACGCGCAAAGAGCATCTTACAAATCACATGAAGCAGCACACTGGAGACTCCCCGCATGCTTGTAAGGTTTGCGCTAAACCTTTCACGAGGAAAGAACACCTTGTCACGCATATGAGGTCTCACAGCTGTGGTGAGCGACCCTTTAGCTGTGGCGAATGTGGCAAATCCTTCCCATTAAAAGGAAACCTGCTCTTCCATGAGAGATCGCATAATAAAGGAGCAAATactaaagtatttaaatgcgAAGTTTGTTCAAAAGAATTTATGTGTAAAggaCACTTAGTGACACATCGTCGGACGCACACTGACACAGCAGAGACTAATGCAGCAGTTGAACCTCCTGCAGAAAATGAAGACTGTACAAATGAGTGCAATAAATGTGATAAAGACCCACTTGAAGTGGATAGAAAGCCTGATATtagACCACCATCGGAAAGCAGAGCAGCTGATAATACTGCTAGTCAAGCTCAAACCAACACGGTGATGCAAATTACGACACAGCAAGTGCAATCAACAGCAGCAACAAGCGCAACCAACGTCACTGCTGGCACTTTTACTGCAACACAGCACCACGCCGGCGCTTCGATAGCGCACCACCCGGTCACCGTGAACTACTAG
Protein Sequence: MNQDHHSINAGGGQPPGNTESQNQRVQSAQQQQQNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPANTRIENGKPVQDLGQAHASILNGDPNIILGHHSGQPQVTVSAGGQQIPISQIITTQSGQAHEALVAHNQQQELTAQQASSGASQVSVGSGQASHQQQHLLQQQLMAARPEHANQQIQLTVSEDGIVTVVEPGGGKLVDKDELHETIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAVDPLLVKDEKNVAKIEAAQFAAPTEIKDIKGIDLKSVGTMGMEGAVVKISAAASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEAQQPQQQQPQQQTQQAKPVLYEVEIEAGTSATMSEAEASPGHHSCDICGKIFQFRYQLIVHRRYHGENKPYTCQVCGNAFSNPTELSKHGKCHLAGDLAERQAKRLSQDKPYACSTCHKTFWRKEHLDNHVRTHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCEVCGKSFTRKEHFTNHILWHSGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGEAPYKCTLCPRGFVRKEHLKTHVRTHTGESPHACTYCSKTFTRKEHLNNHVRQHTGETPFKCTYCVKSFSRKEHLTNHMHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHWCQFCKKTFTRKEHLTNHMKQHTGDSPHACKVCAKPFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGANTKVFKCEVCSKEFMCKGHLVTHRRTHTDTAETNAAVEPPAENEDCTNECNKCDKDPLEVDRKPDIRPPSESRAADNTASQAQTNTVMQITTQQVQSTAATSATNVTAGTFTATQHHAGASIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00771241;
90% Identity: iTF_00357850;
80% Identity: -