Epul023532.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia pulchellata
Gene Symbol
-
Assembly
GCA_963931895.1
Location
OZ007549.1:511967-517838[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 3.5e-05 0.0025 18.8 0.8 1 23 219 242 219 242 0.97
2 24 6.7e-05 0.0048 17.9 5.8 1 23 245 267 245 267 0.97
3 24 7.5e-06 0.00053 20.9 1.8 1 23 302 325 302 325 0.95
4 24 1.7e-07 1.2e-05 26.1 1.0 1 23 331 354 331 354 0.97
5 24 0.00013 0.009 17.0 0.3 1 23 380 403 380 403 0.94
6 24 2.7e-07 1.9e-05 25.4 1.8 1 23 409 432 409 432 0.97
7 24 0.0012 0.089 13.9 0.1 1 23 438 460 438 460 0.98
8 24 0.00088 0.063 14.4 0.6 3 23 468 488 468 489 0.95
9 24 0.00073 0.052 14.6 0.9 1 23 511 534 511 534 0.95
10 24 2.9e-07 2.1e-05 25.3 1.9 1 23 540 563 540 563 0.98
11 24 1.8e-05 0.0013 19.7 1.1 3 23 571 591 569 592 0.94
12 24 0.0022 0.16 13.1 0.7 1 23 606 629 606 629 0.95
13 24 1.1e-06 7.8e-05 23.5 2.1 1 23 635 658 635 658 0.98
14 24 4.6e-06 0.00033 21.5 4.5 1 23 663 685 663 685 0.98
15 24 2.6e-07 1.8e-05 25.5 1.2 1 23 691 713 691 713 0.97
16 24 6e-05 0.0043 18.0 3.0 1 23 718 740 718 740 0.98
17 24 3.5 2.5e+02 3.0 2.6 2 23 748 770 747 770 0.88
18 24 0.078 5.5 8.2 0.6 3 23 778 799 776 799 0.94
19 24 1.4e-05 0.00099 20.0 0.3 2 23 804 825 803 825 0.96
20 24 0.066 4.7 8.4 0.6 1 23 831 853 831 853 0.92
21 24 1.1e-05 0.0008 20.3 4.4 1 23 859 881 859 881 0.97
22 24 3.6e-05 0.0025 18.7 2.5 1 23 887 910 887 910 0.94
23 24 0.00024 0.017 16.1 4.4 1 23 916 938 916 938 0.98
24 24 6.4e-05 0.0045 17.9 2.2 1 23 944 967 944 967 0.97

Sequence Information

Coding Sequence
aTGACGGCGCGGAAGAGAAGGAGAAAAGAGAAGAGCAAGAGCGACGACCGACGACCGACGACCGACGACGCGACCGAGGACGCGTCGCCTCGTCTCGTCGTCGTCCGCGACCGCCCTTGTCCACACACCGTTGTAACAAAAGCTGTACTTTTGCCTTGTAAAGAAAATCAAAAAATGTCTCAAGCTTTGTGCCGTGCGTGCCTAGCGAGTGATATACGAATGGAAGCGCTCAGCAGCTCTCGGTATCGAGAAATTTACGAGAAATATACCGGTGAAAAGCTATTCTTCGGAGATGGCTGCCCTGAAGTCTTGTGCTTCTTCTGTGATGTGCAGCTGCAGAAATTCTACAGGTTCTTTGAACTTGCACAGAGATCGGAGCGGAAACTAAATAGCTTTCTGAACTGTGGAATGCAGCTCACACCCCACACCCTGGCACCAACTGAAAGGATCCACAACTTGGCTGTTTCAGCTACCAAGGTCATATCCTCCTTGGATTTGAAAGAAGAAGATGTGGTGGTTAAAACGGAGCTCCTTGATGATAGGAGTCGAGGGAaggatgattatgatgatgATGTGCCCGACAATGACTCAGAATCGGATCCTCTAGAAGCCCTAACAGTAAAAGCCGAAGCCCTAGATATAAAACACACCATTTACCCATGCGAAGAATGTCCCCGTCGCTTTAACTCCACAAAAGATCTCAACAAACACAAGTCAACGGTCCACAAGCACCACAGCTGCGACAAATGTGGAGAAACATTCAAGAAACAAGCATGTTTAAAAATGCATATGAGATACCACAGTGAAGAAATCCCATTTGATATCAAAACCATCGGAGAAATCCCATTTGTTGAAACTAAAATCAGTGAGTTGAGCAATTTGATAGCAATTGATGGATCGAAGTTTTCATGTGTTATGTGTAGTAAGATGTTTAGTCAGAAAGGTCATTTGAAAACTCATATGATGGCAATACATACTGGAGAAAAACCATTTCCCTGCACGTTGTGTGATAAAAAGTTCGTTCAGCGCAGTAATCTCTCCGCCCATATGAGATCACGTCACGTGAAGCCATTTAATGACTGGAATATGAGTGGAGAAAATGGAGAAGTTGGAGAAGATGACAAAAGCGCGAAGCCGTTCGCCTGTGCAATGTGCAGCAAAACATTTGCAATGAAATCTTACCTCCAATCTCATATAATGGCAATGCATACTGGAGAACGCCCGTTTCCCTGTACACTATGTGATCGGAAATACACGCAAAAAAGTCATTTGAGAGCGCATATGAGAATCGCACACGCCGTGGAGAAGCCATTCGAATGTGAGAGCTGTGAGTTACGGTTTGGCGATGCCGAGGAGTTGCGAAAACATGCGAAAATACATGCGGATGAGAAACCTTTAGGCTGTGCTACGTGTGGTAAAGTTTTTCAAGCTGAAAGCGATTTGAAGAAACATATTATTCTTCACCATGGAGAAGCTTCGTTACTCTGCGATCGCAGTGACATCATCAGTGAGAATGTTAGCAAGAAACGCTTCCCTTGTGACCAGTGCAGTAAGACTTTCGGCTGGAAATCTCATTTGAAAACTCATATAATGGCAATTCACACTGGAGAAAGACCATTTTCTTGCAATATGTGTGAAAAGAAGTTTGTGCAGAGAAGCTCTCTTAGGGTACATATGAGAACATCTCATACAGAGCATAAGCCACTGGCCTGTGATACATGCAATAAAGCTTTTCAGTCAGAATCTAGCTTGAAAAAACATATGATTATACACCATGGAGAAACTGAAAAAGATGACGCTAAAACCAACAAGCGGTTTTCTTGCGCAACGTGTTCAAAGTCATTCGGCTGGAAATCTCATTTGAAAGTTCATATAATGGCAATTCATACCGGAGAAAAACCATTTTCCTGCACGATTTGTGATAAAAAATTTGTTCAAAAGAATTATTTACGAACTCATATGTTGACGAGTCATTCAGGTGTAGGATTTACTTGCGAGAAATGCAATAAACGGTGTACCTCAGCGAGCAACCTACGTATACACATGAGATTTCATACTGGCGAAAAGCCATATGCCTGCAGCAAATGCAACAAGTCATTTAAAAGAAATGACAGCCTCAAAGTCCATATGGCTTCGCATCGCGGCGAACAGTTTACTTGCAAAGTCTGCTCAGTTAGATTTACTTCTAAAACGAGCTATCAAACTCATATGCGGCTGCATACTAGTCAGTTACCTCCATTCTTATGTTTAAGATGCGAAGAAAAGTTTAACTTAAAGAGCGATTTAgacatacataatactaaaTGCCATGCAGCCGATATGCCATTCGGTTGCGACTCTTGCGAATTAAGATTCGACGACAAAAACGTGCTAAAAAAACACCAGCTTTTACAGCACGAGGAAAAACTAACGTGTGATATATGCGTCAAATCATTTAACGCGAAAAGTGCATTGCGAAGACACATGTCCATTCACAGCACGGAGAAACCGTTCGCTTGTATAATTTGCAATAAATTCTACAAACAAGAGCGTATACTGAAAAAACACATGGAAATACACACAGAGGAGAAACAATTCGCATGCGACAGATGCGATAAAAAATTCTACCAGAAATGTAATTTGACAAGCCATATGAGAATACACTCTGGCGAAAAGCCATTTGTTTGCGACCGGTGTGGTAACAGCTTTAACCAAAAAAGTCATTTGAGGACTCATATACTGTTTATGCATACATCGGAGAGGCCTTACTCGTGTGACATATGCAGTAAGAGGTTTAGACTGAAGAGTTGTCTGCGGAACCATAAAATGGTACATAGTGGTGAGCGGCCGTATCCATGTAATTTGTGTGAGAAAAAGTATTATAAGAAGAGCGAGTTGAAGTCTCATATGACTAAAATGCATagctaa
Protein Sequence
MTARKRRRKEKSKSDDRRPTTDDATEDASPRLVVVRDRPCPHTVVTKAVLLPCKENQKMSQALCRACLASDIRMEALSSSRYREIYEKYTGEKLFFGDGCPEVLCFFCDVQLQKFYRFFELAQRSERKLNSFLNCGMQLTPHTLAPTERIHNLAVSATKVISSLDLKEEDVVVKTELLDDRSRGKDDYDDDVPDNDSESDPLEALTVKAEALDIKHTIYPCEECPRRFNSTKDLNKHKSTVHKHHSCDKCGETFKKQACLKMHMRYHSEEIPFDIKTIGEIPFVETKISELSNLIAIDGSKFSCVMCSKMFSQKGHLKTHMMAIHTGEKPFPCTLCDKKFVQRSNLSAHMRSRHVKPFNDWNMSGENGEVGEDDKSAKPFACAMCSKTFAMKSYLQSHIMAMHTGERPFPCTLCDRKYTQKSHLRAHMRIAHAVEKPFECESCELRFGDAEELRKHAKIHADEKPLGCATCGKVFQAESDLKKHIILHHGEASLLCDRSDIISENVSKKRFPCDQCSKTFGWKSHLKTHIMAIHTGERPFSCNMCEKKFVQRSSLRVHMRTSHTEHKPLACDTCNKAFQSESSLKKHMIIHHGETEKDDAKTNKRFSCATCSKSFGWKSHLKVHIMAIHTGEKPFSCTICDKKFVQKNYLRTHMLTSHSGVGFTCEKCNKRCTSASNLRIHMRFHTGEKPYACSKCNKSFKRNDSLKVHMASHRGEQFTCKVCSVRFTSKTSYQTHMRLHTSQLPPFLCLRCEEKFNLKSDLDIHNTKCHAADMPFGCDSCELRFDDKNVLKKHQLLQHEEKLTCDICVKSFNAKSALRRHMSIHSTEKPFACIICNKFYKQERILKKHMEIHTEEKQFACDRCDKKFYQKCNLTSHMRIHSGEKPFVCDRCGNSFNQKSHLRTHILFMHTSERPYSCDICSKRFRLKSCLRNHKMVHSGERPYPCNLCEKKYYKKSELKSHMTKMHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00706247; iTF_00699431; iTF_00703229; iTF_00701275; iTF_00704242; iTF_00700309; iTF_00705277; iTF_01161568;
90% Identity
iTF_00700309;
80% Identity
-