Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352255.1:786617-792959[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.13 8.3 7.4 4.3 1 23 163 186 163 186 0.95

2 24 0.0002 0.013 16.2 3.6 1 23 189 211 189 211 0.97

3 24 1.8e-05 0.0011 19.5 1.1 1 23 246 269 246 269 0.95

4 24 2.9e-07 1.9e-05 25.1 1.7 1 23 275 298 275 298 0.97

5 24 0.0001 0.0067 17.1 0.3 1 23 324 347 324 347 0.94

6 24 2.3e-07 1.4e-05 25.5 1.8 1 23 353 376 353 376 0.97

7 24 0.016 1 10.2 0.7 1 23 382 404 382 404 0.97

8 24 0.00091 0.058 14.1 0.6 3 23 412 432 412 433 0.95

9 24 0.00061 0.039 14.7 0.9 1 23 455 478 455 478 0.95

10 24 1.5e-07 9.7e-06 26.0 1.2 1 23 484 507 484 507 0.98

11 24 5.1e-05 0.0032 18.1 0.8 3 23 515 535 513 536 0.94

12 24 0.002 0.13 13.0 1.1 1 23 550 573 550 573 0.95

13 24 9e-07 5.8e-05 23.6 2.1 1 23 579 602 579 602 0.98

14 24 3.8e-06 0.00025 21.6 4.5 1 23 607 629 607 629 0.98

15 24 1.5e-07 9.3e-06 26.1 1.3 1 23 635 657 635 657 0.97

16 24 1.2e-05 0.00076 20.1 2.9 1 23 662 684 662 684 0.98

17 24 0.026 1.6 9.6 1.1 2 23 692 714 691 714 0.89

18 24 0.025 1.6 9.6 1.0 3 23 722 743 720 743 0.92

19 24 1.6e-05 0.001 19.7 0.3 2 23 748 769 747 769 0.96

20 24 0.047 3 8.8 0.8 1 23 775 797 775 797 0.92

21 24 9.3e-06 0.00059 20.4 4.4 1 23 803 825 803 825 0.97

22 24 3e-05 0.0019 18.8 2.5 1 23 831 854 831 854 0.94

23 24 0.00036 0.023 15.4 4.4 1 23 860 882 860 882 0.98

24 24 0.00037 0.023 15.4 1.6 1 23 888 911 888 911 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.13	8.3	7.4	4.3	1	23	163	186	163	186	0.95
2	24	0.0002	0.013	16.2	3.6	1	23	189	211	189	211	0.97
3	24	1.8e-05	0.0011	19.5	1.1	1	23	246	269	246	269	0.95
4	24	2.9e-07	1.9e-05	25.1	1.7	1	23	275	298	275	298	0.97
5	24	0.0001	0.0067	17.1	0.3	1	23	324	347	324	347	0.94
6	24	2.3e-07	1.4e-05	25.5	1.8	1	23	353	376	353	376	0.97
7	24	0.016	1	10.2	0.7	1	23	382	404	382	404	0.97
8	24	0.00091	0.058	14.1	0.6	3	23	412	432	412	433	0.95
9	24	0.00061	0.039	14.7	0.9	1	23	455	478	455	478	0.95
10	24	1.5e-07	9.7e-06	26.0	1.2	1	23	484	507	484	507	0.98
11	24	5.1e-05	0.0032	18.1	0.8	3	23	515	535	513	536	0.94
12	24	0.002	0.13	13.0	1.1	1	23	550	573	550	573	0.95
13	24	9e-07	5.8e-05	23.6	2.1	1	23	579	602	579	602	0.98
14	24	3.8e-06	0.00025	21.6	4.5	1	23	607	629	607	629	0.98
15	24	1.5e-07	9.3e-06	26.1	1.3	1	23	635	657	635	657	0.97
16	24	1.2e-05	0.00076	20.1	2.9	1	23	662	684	662	684	0.98
17	24	0.026	1.6	9.6	1.1	2	23	692	714	691	714	0.89
18	24	0.025	1.6	9.6	1.0	3	23	722	743	720	743	0.92
19	24	1.6e-05	0.001	19.7	0.3	2	23	748	769	747	769	0.96
20	24	0.047	3	8.8	0.8	1	23	775	797	775	797	0.92
21	24	9.3e-06	0.00059	20.4	4.4	1	23	803	825	803	825	0.97
22	24	3e-05	0.0019	18.8	2.5	1	23	831	854	831	854	0.94
23	24	0.00036	0.023	15.4	4.4	1	23	860	882	860	882	0.98
24	24	0.00037	0.023	15.4	1.6	1	23	888	911	888	911	0.96

Sequence Information

Coding Sequence: ATGACTCAATCTTTGTGTCGTGCGTGCTTAGCAAGTGATATACGAATGGAAGCGCTCAGCAACTCTCGGTATCAAGAAATTTACGAGAAATACACCGGCGAGAAGCTGTTCTTTGGAGATGGCTGCCCAAAAAGCCTGTGCTTCCTTTGTGACGCACAGCTGCAGAAATTCTGCAGGTTCTTTAAGCTTGCACAGAGATCAGAGAGGAATCTCATTAGTTTGCTCAACTGTGGAATGCAGCTTACACCCCACACCCTGGCACCAACTGGGAGCATCCACAACCTAGCAGTCTCTCCCACCAAGATTATATCCTCACTGGACTGGCACTTGAAGGAAGAAGAAGTGGTCGTCAAAACGGAGCTGCTTGATGACAGGAGACGAGGGAAGGACTTGTATGATGATGATGTCCCTGATAATGACTCGGAATCGGATCCTCTAGAAGCCCTAACCGTAAAAGCAGAAGCCCTGGACATTAAACACACCATCCACCCATGCGAAGAATGTCCCCGCAGATTCAACTGCACTAAAGACCTCAACAAACACAAGACAACAGTCCACAAACACCACAGCTGCGATAAATGCGGAGATACATTTAAGAAACAAGCATATTTAAAAATGCATATGAGGTACCACTCTGAAGAAATCCCTTTCGATATCAAAACCATCGGAGAAATCCCATTTGTGGAACCTAAAATTAGTGAATTGAGCAATTTGATAGCAACAGATGGAACGAAATTTTCTTGTGTAATGTGTAGCAAGATATTCAGCCAGAAAGGTCATCTGAAAACTCATATAATGGCAATTCACACTGGAGAAAAGCCATTCAATTGTACATTGTGTGATAAAAAGTTTGTTCAGCGCAGTAATCTATCCGCGCATATGAGATCACGGCATGTGAAGCCATTTAATAATTGGAATTTGAGTGGAGAAAGTGGAGAACTCGGAGAAGAAGACAACAGTGCAAAGCCTTTCGCCTGTGCAATGTGCAGTAAAACATTTGCAATGAAATCTTACCTTCAATCTCATATTATGGCAATGCACACTGGAGAACGTCCGTTTCCCTGCACATTATGCGATCGTAAGTACACGCAAAAAAGCCATTTACGAGCGCATATGAGAATTGCACACGCTGTGGAGAAACCATTTGAATGCAATTGTTGTGAGCTAAGGTTTGGTGATGCTGAAGAGTTGAGAAAACATGCGAAAATTCACGCCAATGAGAAGCCTTTAGGTTGTGTTACGTGTGGGAAAGTCTTTCAAGCAGAAAGCGATCTTAAAAAACATATTATTCTTCACCATGGAGAAGCTTCCCTACTTTGCGATCGCGTTGACATTATCAGTGAGAATGTTACCAGAAAACGCTTCCCTTGCGACCAGTGCAGTAAAACTTTCGGCTGGAAATCACATTTAAAAACTCATATAATGGCAATTCACACCGGAGAAAGGCCATTTTCTTGCAATATGTGTGAGAAGAAGTTTGTGCAGAGAAGCTCTCTTAGGGTACATATGAGAACAGCTCATACAGAGCATAAGCCAATGGCCTGTGATACATGCAATAAAGCTTTTCAATCAGAAGCTAGCTTGAAAAAACATATGATTATTCACCATGGAGAAACAGAAGAAAATAATTTTAAAACTGACAAGCGGTTTTCATGCGCGACGTGTTCTAAGTCATTTGGCTGGAAATCTCATTTAAAAACTCATATAATGGCAATTCACACTGGAGAAAAGCCATTTTCGTGCACAATTTGTGATAAAAAATTCGTTCAGAAAAATTATTTACGAACTCATATGCTGACAAGTCACTCAGGCGTAGGATTTACCTGCGAGAAATGCAATAAACGGTGCACCTCAGCCAGCAACCTACGAATACACATGAGATTTCACACTGGCGAAAAGCCATATGCCTGCAATAAATGTAACAAGTCATTTAAAAGGAATGATAGTCTCAAAGTCCACATGGCTTCGCATCGCGGCGAACAGTATACTTGCAAAGTCTGTTCAGTTAGATTTACGTCTAAAACAAACTATCAAACTCATATGCGACTACACACAAGTCTTTTACCGCCATTCTTATGTTTAAGATGCGACGAGAAGTTCAATTCAAAGAGCGATTTGGATATACACAACACTAAAAGCCATGCATCTGATATGCCATTCGGATGCGATTCTTGCGAACTAAGATTCGACGACAAAAACTTACTGAAAAAACATCAATTTCTACAGCATGAAGAAAAACTATCGTGTGATATATGCGTTAAATCATTTAACGCGAAAAGTGCGTTGCGAAGGCACATGTCCATTCACAGCACGGAAAAGCCATTCGCGTGTATAATCTGCAATAAATTCTACAAACAAGAGCGTATACTGAAAAAACATATGGAGATGCACACAGAAGAGAAGCAATTCGCTTGTGACAGATGCGACAAGAAATTCTACCAGAAATGTAACTTGACAAGTCATATGAGAATCCACTCAGGTGAAAAGCCATTTGTTTGCGACCGGTGTGGTAACAGCTTTAACCAGAAAAGTCATTTAAGAACTCATATACTGTTTATGCATACATCAGAACGACCTTATTCGTGTGATGTGTGTAGCAAGAGGTTTAGGTTAAAGAGTTGTTTACGGAATCATAAAATGGTGCATAGCGGGGAGCGGCCGTATCCGTGTAGTCTTTGTGAGAAGAAATATTATAAAAAGAGCGAGTTGAAATCTCATACAGCTAAAATGCATAACTCAAGCTAA
Protein Sequence: MTQSLCRACLASDIRMEALSNSRYQEIYEKYTGEKLFFGDGCPKSLCFLCDAQLQKFCRFFKLAQRSERNLISLLNCGMQLTPHTLAPTGSIHNLAVSPTKIISSLDWHLKEEEVVVKTELLDDRRRGKDLYDDDVPDNDSESDPLEALTVKAEALDIKHTIHPCEECPRRFNCTKDLNKHKTTVHKHHSCDKCGDTFKKQAYLKMHMRYHSEEIPFDIKTIGEIPFVEPKISELSNLIATDGTKFSCVMCSKIFSQKGHLKTHIMAIHTGEKPFNCTLCDKKFVQRSNLSAHMRSRHVKPFNNWNLSGESGELGEEDNSAKPFACAMCSKTFAMKSYLQSHIMAMHTGERPFPCTLCDRKYTQKSHLRAHMRIAHAVEKPFECNCCELRFGDAEELRKHAKIHANEKPLGCVTCGKVFQAESDLKKHIILHHGEASLLCDRVDIISENVTRKRFPCDQCSKTFGWKSHLKTHIMAIHTGERPFSCNMCEKKFVQRSSLRVHMRTAHTEHKPMACDTCNKAFQSEASLKKHMIIHHGETEENNFKTDKRFSCATCSKSFGWKSHLKTHIMAIHTGEKPFSCTICDKKFVQKNYLRTHMLTSHSGVGFTCEKCNKRCTSASNLRIHMRFHTGEKPYACNKCNKSFKRNDSLKVHMASHRGEQYTCKVCSVRFTSKTNYQTHMRLHTSLLPPFLCLRCDEKFNSKSDLDIHNTKSHASDMPFGCDSCELRFDDKNLLKKHQFLQHEEKLSCDICVKSFNAKSALRRHMSIHSTEKPFACIICNKFYKQERILKKHMEMHTEEKQFACDRCDKKFYQKCNLTSHMRIHSGEKPFVCDRCGNSFNQKSHLRTHILFMHTSERPYSCDVCSKRFRLKSCLRNHKMVHSGERPYPCSLCEKKYYKKSELKSHTAKMHNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702195;
90% Identity: iTF_00706247;
80% Identity: -