Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751125.1:1227205-1233921[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.15 12 7.4 4.3 1 23 161 184 161 184 0.95

2 24 5.6e-05 0.0045 18.2 3.9 1 23 187 209 187 209 0.97

3 24 3.7e-07 3e-05 25.0 1.4 1 23 243 266 243 266 0.95

4 24 1.6e-07 1.3e-05 26.2 1.0 1 23 272 295 272 295 0.97

5 24 6.3e-05 0.0051 18.0 0.2 1 23 320 343 320 343 0.94

6 24 2.7e-07 2.2e-05 25.5 1.8 1 23 349 372 349 372 0.97

7 24 0.005 0.41 12.0 0.1 1 23 378 400 378 400 0.98

8 24 0.0019 0.16 13.3 0.2 3 23 408 429 408 429 0.94

9 24 0.00071 0.058 14.7 0.9 1 23 451 474 451 474 0.95

10 24 1.8e-07 1.5e-05 26.0 1.2 1 23 480 503 480 503 0.98

11 24 5e-05 0.0041 18.3 0.7 3 23 511 531 509 532 0.94

12 24 0.0024 0.19 13.0 1.1 1 23 546 569 546 569 0.95

13 24 1.2e-06 9.3e-05 23.5 2.2 1 23 575 598 575 598 0.98

14 24 4.3e-06 0.00035 21.7 3.5 1 23 603 625 603 625 0.98

15 24 1.7e-07 1.4e-05 26.1 1.0 1 23 631 653 631 653 0.97

16 24 5.9e-05 0.0048 18.1 3.0 1 23 658 680 658 680 0.98

17 24 0.075 6.1 8.3 1.1 2 23 688 710 687 710 0.88

18 24 0.076 6.2 8.3 0.6 3 23 718 739 716 739 0.94

19 24 2.6e-05 0.0021 19.2 0.2 2 23 744 765 743 765 0.96

20 24 0.065 5.3 8.5 0.6 1 23 771 793 771 793 0.92

21 24 1.1e-05 0.00089 20.4 4.4 1 23 799 821 799 821 0.97

22 24 3.5e-05 0.0028 18.8 2.5 1 23 827 850 827 850 0.94

23 24 0.00059 0.048 15.0 4.2 1 23 856 878 856 878 0.98

24 24 0.0034 0.27 12.6 3.0 1 23 884 907 884 907 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.15	12	7.4	4.3	1	23	161	184	161	184	0.95
2	24	5.6e-05	0.0045	18.2	3.9	1	23	187	209	187	209	0.97
3	24	3.7e-07	3e-05	25.0	1.4	1	23	243	266	243	266	0.95
4	24	1.6e-07	1.3e-05	26.2	1.0	1	23	272	295	272	295	0.97
5	24	6.3e-05	0.0051	18.0	0.2	1	23	320	343	320	343	0.94
6	24	2.7e-07	2.2e-05	25.5	1.8	1	23	349	372	349	372	0.97
7	24	0.005	0.41	12.0	0.1	1	23	378	400	378	400	0.98
8	24	0.0019	0.16	13.3	0.2	3	23	408	429	408	429	0.94
9	24	0.00071	0.058	14.7	0.9	1	23	451	474	451	474	0.95
10	24	1.8e-07	1.5e-05	26.0	1.2	1	23	480	503	480	503	0.98
11	24	5e-05	0.0041	18.3	0.7	3	23	511	531	509	532	0.94
12	24	0.0024	0.19	13.0	1.1	1	23	546	569	546	569	0.95
13	24	1.2e-06	9.3e-05	23.5	2.2	1	23	575	598	575	598	0.98
14	24	4.3e-06	0.00035	21.7	3.5	1	23	603	625	603	625	0.98
15	24	1.7e-07	1.4e-05	26.1	1.0	1	23	631	653	631	653	0.97
16	24	5.9e-05	0.0048	18.1	3.0	1	23	658	680	658	680	0.98
17	24	0.075	6.1	8.3	1.1	2	23	688	710	687	710	0.88
18	24	0.076	6.2	8.3	0.6	3	23	718	739	716	739	0.94
19	24	2.6e-05	0.0021	19.2	0.2	2	23	744	765	743	765	0.96
20	24	0.065	5.3	8.5	0.6	1	23	771	793	771	793	0.92
21	24	1.1e-05	0.00089	20.4	4.4	1	23	799	821	799	821	0.97
22	24	3.5e-05	0.0028	18.8	2.5	1	23	827	850	827	850	0.94
23	24	0.00059	0.048	15.0	4.2	1	23	856	878	856	878	0.98
24	24	0.0034	0.27	12.6	3.0	1	23	884	907	884	907	0.96

Sequence Information

Coding Sequence: atgtcTCAAGTTTTGTGTCGAGCGTGCTTAGCGAGTGATATACGAATAAGGGTGCTCAGCAGCTCTCGGTATCAAGAAATTTACGAGAAATACACCGGCGAGAAGcTATTCATTGGAGATGGCTACCCAGAAGTCCTATGCTTCCTCTGCAATGCACAGCTGCAGAAATTCTGCAAGTTCTTTGAGCTTGCACAGAGATCGGAGAGGAACCTCATTAGCCTTCTGAACTGTGGTATGCAGCTAACACTCAACAACCTGGCACCAACTGAGAGAATCCACAACCTAGCGGTTACCCCGACCAAGGTGATATCCTCACTGGAGGGGCATTTAAAAGAAGAAGTGGTTGTCAAAACGGAGCTTGATGACAGGAGACGAGGGGAGGACGTGTATGATGATGATGTACCCGATAACGACTCAGAATCGGACCCTCTAGAAGCCCTAACAGTAAAAGCAGAAGCCCTAGACATAAAACACACCGTCCACCCATGCGAAGAGTGCCCCCGCCGTTTCAACTGCACTAAAGACCTGAACAAACACAAGACAACGGTCCACAAACACCACAGCTGCGACAAATGCGAAGAAACATTCAAGAAACAAGGATATTTAAAAATGCATATGAGATACCACACCGAAGAAACATTCGATATCAAAACCATCGCAGAAATTCCATTCGTCGAAACCAAAACCAGTGATTTGAGCAATTTAATAGCGATAGATGGATCGAAATTTTCGTGTGTAATGTGTGGCAAAACATTCAGTCAGAAAGGTCATTTGAAAACTCATATGATGGCAATTCACACGGGAGAAAAACCCTTTCCTTGCACGTTATGTGACAAAAAGTTCGTTCAACGCAGTAATCTCTCCGCCCATATGAGATCAAGACATGTAAAGCCGTTTAATAACTGGAATATGAGTGAAGAGAGTGGAGAAATAGGAGACGACAAAAGTGCGAAACCTTTCGCTTGTGCGATATGCAGCAAGACATTCGCAATGAAATCTTACCTCCAATCTCATATAATGGCAATGCACACTGGTGAACGCCCTTTTCCTTGCACGTTATGCGACAGAAAATACACGCAGAAGAGCCATTTACGAGCGCATATGAGAATCGCACACGCTGTGGAGAAACCATTTGAATGCGAGAGCTGCGAGTCAAGATTTGGAGATGCTGAAGAGTTGAGGAAACATGCGAAGATACACGCGAATGAGAAACCTCTAGGTTGTGTTACGTGTGGGAAGGTCTTTCAAGCAGAAAGCGATTTGAAGAAACATATTATTCTGCAACATGGAGAGGCCTCGCTGCTTTGTGATCGTAGTGACATCATAAGTGATAATGTTAGCAAAAAACGCTTCCCTTGTGACCAGTGTAGTAAAACTTTCGGCTGGAAATCTCATTTAAAAACTCATATAATGGCAATTCATACTGGAGAAAGACCATTTTCTTGCAATATGTGTGAGAAGAAGTTTGTACAGAGAAGCTCTCTCAGGGTACATATGAGAACAGCTCATATGGAGCATAAGCCACTGGCCTGTGATACATGCAATAAAGCTTTCCAATCGGAAGCTAGCTTGAAGAAACATATGATTATTCATCATGGAGAACCTGAAAAAAATAACTCTAAAACTAACAAGCGGTTTTCATGCGCGACGTGTTCTAAATCATTTGGCTGGAAATCTCATTTAAAAACTCATATAATGGCAATTCATACCGGGGAAAAGCCATTTACGTGCACGATTTGTGATAAAAAATTCGTTCAGAGAAATTATTTACGTACTCATATGTTGACAAGTCACTCAGGTGTATGTTTTACTTGCGAAAGATGCAATAAGCGATGCACATCTGCCAGTAACCTACGAATACACATGAGACTTCACACTGGCGAGAAACCATATGCCTGCAGTAAATGTGACAAGTCATTTAAAAGGAATGACAGCTTGAAAATCCATATGGCATCGCATCGCGGGGAACAGTTCACTTGCAAAGTCTGTTCAGTTAGATTTACCTCCAAAACGAGCTATCAAACTCATATGCGGTTACACACAAGTCATTTGCCGCCATTTTTGTGTTTAAGATGCGAGGAAAAGTTCAACACAAAAAGTGATTTAGATATACATAACACAAAAAGTCATGCAAATGATATGCCATTCGGATGCGACTCTTGCGAACTAAGATTCGACGATAAGAACGTACTGAAAAAACATCAATTGCTGCAGCACGAGGAGAAATTAACTTGCGGAATTTGCGTTAAATCATTTAACGCGAAAAGTGCTTTGCGAAGACACATGTCCATACACAGCACGGAAAAACCATTCGCTTGTATAATCTGCAATAAATTCTACAAACAAGAGCGAATACTGAAGAAACATATGGAGATACACACAGAGGAAAAACAATTCGCATGTGACAGATGCGATAAGAAATTCTACCAGAAGTGTAACTTGACGAGTCATATGAGGATACACTCCGGTGAAAAGCCATTTGTTTGTGACCGGTGTGGTAATAGTTTTAACCAGAAAAGTCATTTAAGAACTCATATATTGTTTATGCATACTTCAGAGAGGCCTTATTCGTGTGATGTATGCAGTAAGAGATTTCGATTAAAGAGTTGCTTGCGGAATCATAAGCTGGTGCATAGCGGAGAGAGGCCATATCCTTGCAGTTTGTGTGAGAAGAAATATTATAAGAAGTGCGAGTTGAAGTCTCATATAGCTAAAATGCATAACTCAATGTCAATAGAAAATATAACAtga
Protein Sequence: MSQVLCRACLASDIRIRVLSSSRYQEIYEKYTGEKLFIGDGYPEVLCFLCNAQLQKFCKFFELAQRSERNLISLLNCGMQLTLNNLAPTERIHNLAVTPTKVISSLEGHLKEEVVVKTELDDRRRGEDVYDDDVPDNDSESDPLEALTVKAEALDIKHTVHPCEECPRRFNCTKDLNKHKTTVHKHHSCDKCEETFKKQGYLKMHMRYHTEETFDIKTIAEIPFVETKTSDLSNLIAIDGSKFSCVMCGKTFSQKGHLKTHMMAIHTGEKPFPCTLCDKKFVQRSNLSAHMRSRHVKPFNNWNMSEESGEIGDDKSAKPFACAICSKTFAMKSYLQSHIMAMHTGERPFPCTLCDRKYTQKSHLRAHMRIAHAVEKPFECESCESRFGDAEELRKHAKIHANEKPLGCVTCGKVFQAESDLKKHIILQHGEASLLCDRSDIISDNVSKKRFPCDQCSKTFGWKSHLKTHIMAIHTGERPFSCNMCEKKFVQRSSLRVHMRTAHMEHKPLACDTCNKAFQSEASLKKHMIIHHGEPEKNNSKTNKRFSCATCSKSFGWKSHLKTHIMAIHTGEKPFTCTICDKKFVQRNYLRTHMLTSHSGVCFTCERCNKRCTSASNLRIHMRLHTGEKPYACSKCDKSFKRNDSLKIHMASHRGEQFTCKVCSVRFTSKTSYQTHMRLHTSHLPPFLCLRCEEKFNTKSDLDIHNTKSHANDMPFGCDSCELRFDDKNVLKKHQLLQHEEKLTCGICVKSFNAKSALRRHMSIHSTEKPFACIICNKFYKQERILKKHMEIHTEEKQFACDRCDKKFYQKCNLTSHMRIHSGEKPFVCDRCGNSFNQKSHLRTHILFMHTSERPYSCDVCSKRFRLKSCLRNHKLVHSGERPYPCSLCEKKYYKKCELKSHIAKMHNSMSIENIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702195;
90% Identity: iTF_00701275; iTF_00705277;
80% Identity: -