Basic Information

Insect: Eupithecia inturbata
Gene Symbol: -
Assembly: GCA_963662085.1
Location: OY759204.1:1315937-1326656[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.14 11 7.4 4.3 1 23 162 185 162 185 0.95

2 24 6e-06 0.00044 21.2 3.5 1 23 188 210 188 210 0.97

3 24 8.8e-06 0.00065 20.6 1.9 1 23 245 268 245 268 0.95

4 24 2.1e-07 1.5e-05 25.8 1.6 1 23 274 297 274 297 0.97

5 24 0.00012 0.0086 17.1 0.3 1 23 322 345 322 345 0.94

6 24 2.5e-07 1.9e-05 25.5 1.8 1 23 351 374 351 374 0.97

7 24 0.0078 0.57 11.4 0.1 1 23 380 402 380 402 0.98

8 24 0.001 0.074 14.2 0.6 3 23 410 430 410 431 0.95

9 24 0.00068 0.05 14.7 0.9 1 23 453 476 453 476 0.95

10 24 3e-07 2.2e-05 25.3 2.0 1 23 482 505 482 505 0.98

11 24 0.00046 0.034 15.2 0.6 3 23 513 533 511 534 0.94

12 24 0.0023 0.17 13.1 1.1 1 23 548 571 548 571 0.95

13 24 2.1e-06 0.00015 22.6 2.0 1 23 577 600 577 600 0.97

14 24 5.5e-06 0.0004 21.3 3.4 1 23 605 627 605 627 0.98

15 24 1.5e-07 1.1e-05 26.2 0.7 1 23 633 655 633 655 0.97

16 24 4.7e-05 0.0035 18.3 3.1 1 23 660 682 660 682 0.98

17 24 0.029 2.1 9.6 1.1 2 23 690 712 689 712 0.89

18 24 0.07 5.2 8.4 0.5 3 23 720 741 718 741 0.94

19 24 0.00034 0.025 15.7 0.2 2 23 746 767 745 767 0.96

20 24 0.062 4.5 8.5 0.6 1 23 773 795 773 795 0.92

21 24 1e-05 0.00076 20.4 4.4 1 23 801 823 801 823 0.97

22 24 3.3e-05 0.0024 18.8 2.5 1 23 829 852 829 852 0.94

23 24 0.00056 0.041 15.0 4.2 1 23 858 880 858 880 0.98

24 24 0.00012 0.0087 17.1 3.0 1 23 886 909 886 909 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.14	11	7.4	4.3	1	23	162	185	162	185	0.95
2	24	6e-06	0.00044	21.2	3.5	1	23	188	210	188	210	0.97
3	24	8.8e-06	0.00065	20.6	1.9	1	23	245	268	245	268	0.95
4	24	2.1e-07	1.5e-05	25.8	1.6	1	23	274	297	274	297	0.97
5	24	0.00012	0.0086	17.1	0.3	1	23	322	345	322	345	0.94
6	24	2.5e-07	1.9e-05	25.5	1.8	1	23	351	374	351	374	0.97
7	24	0.0078	0.57	11.4	0.1	1	23	380	402	380	402	0.98
8	24	0.001	0.074	14.2	0.6	3	23	410	430	410	431	0.95
9	24	0.00068	0.05	14.7	0.9	1	23	453	476	453	476	0.95
10	24	3e-07	2.2e-05	25.3	2.0	1	23	482	505	482	505	0.98
11	24	0.00046	0.034	15.2	0.6	3	23	513	533	511	534	0.94
12	24	0.0023	0.17	13.1	1.1	1	23	548	571	548	571	0.95
13	24	2.1e-06	0.00015	22.6	2.0	1	23	577	600	577	600	0.97
14	24	5.5e-06	0.0004	21.3	3.4	1	23	605	627	605	627	0.98
15	24	1.5e-07	1.1e-05	26.2	0.7	1	23	633	655	633	655	0.97
16	24	4.7e-05	0.0035	18.3	3.1	1	23	660	682	660	682	0.98
17	24	0.029	2.1	9.6	1.1	2	23	690	712	689	712	0.89
18	24	0.07	5.2	8.4	0.5	3	23	720	741	718	741	0.94
19	24	0.00034	0.025	15.7	0.2	2	23	746	767	745	767	0.96
20	24	0.062	4.5	8.5	0.6	1	23	773	795	773	795	0.92
21	24	1e-05	0.00076	20.4	4.4	1	23	801	823	801	823	0.97
22	24	3.3e-05	0.0024	18.8	2.5	1	23	829	852	829	852	0.94
23	24	0.00056	0.041	15.0	4.2	1	23	858	880	858	880	0.98
24	24	0.00012	0.0087	17.1	3.0	1	23	886	909	886	909	0.97

Sequence Information

Coding Sequence: atgtcTCAAGCTTTGTGTCGAGCGTGCTTGGCGAGTGATATACGCATAAAGGTGCTGAGCAACTCTCGGTATCAAGAAATTTACGAGAAGTACACCGGCGAAAAGctaTTCTTTGGAGATGGCTGCCCTGAAGTCCTCTGCTTCCTCTGCGACGCACAGCTGCAGAAATTCTGCAGGTTCCTTGAGCTCGCACAGAGATCGGAGAGGAATCTCACCAGCTTTCTGAACCGTGGGATGCAGCTAACACCCCACACCCTGGCACCGACTGAGCGAATTCACAACCTAACGGTGTCTCCAACCAAGGTGATATCCTCACTGGACTGGCATTTGAAAGAAGAAGTGGTGGTCAAAACGGAGCTGCTTGATGACAGGAGACAAGGAGAGGAAGTGTATGATGATGATGTCCCCGATCACGACTCAGAATCGGACCCTCTAGAAGCCCTAACAGTAAAAGCAGAAGCCCCGGACACAAAGCACACCATCCATCCATGCGAAGAATGTCCCCGCCGCTTCAACTGCACTAAAGACCTCAACAAGCACAAGACAACAGTCCATAAACACCACAGCTGCGATAAATGCGGAGAAACGTTCAAGAAACAAGCATATTTAAAAATGCATATGCGATACCACACTGAAGAAATCCCGTTCGATATCAAAACCATCGGAGAAATCCCATTCGTGGAAACTAAAATCAGTGAATTGAGCAATTTGATAGCAATAGATGGATCGAAATTTTCTTGTCTGATGTGCAGCAAAACATTCAGCCAGAAAGGTCATTTGAAAACTCATATAATGGCAATTCACACCGGAGAAAAGCCCTTTTCCTGCACATTGTGTGATAAAAAGTTCGTTCAGCGCAGTAATCTCTCCGCGCATATGAGATCAAGACACGTGAAGCCAATAATTGACTGGAATATGAGCGGAGAAAGTGGAGAAGTCGGAGAAGACATGAGTGCGAAGCCTTTCGCCTGTGCAATGTGCAGCAAAACATTCGCAATGAAATCTTACCTCCAATCTCATATTATGGCAATGCACACCGGAGAACGACCGTTTCCGTGTACATTATGCGATCGGAAATATACGCAAAAAAGCCATTTACGCGCGCATATGAGAATCGCACACGCTGTGGAGAAGCCATTTGAATGCGAGAGCTGTGAGTTAAGGTTTGGAGATGCTGAAGAGATGAGAAAACATGCGAAAATCCACGCGAATGAGAAGCTTCTAGGTTGTGTTACGTGTGGGAAGGTATTTCAAGCAGAAAGCGATCTTAAGAAACATATTATTCTTCACCATGGAGAGGCTTCGCTACTTTGCGAGCGCAGTGACATCATCAGTGATAATGTTAGCAAAAAACGCTTCCCTTGCGACCAGTGCAGTAAGACTTTCGGCTGGAAATCTCATTTAAAAACTCATATAATGGCAATTCACACTGGAGAAAGGCCATTTTCTTGCAATATGTGTGAGAAGAAATTTGTGCAGAGGAGCTCTCTCAGGGTACATATGAGAACAACGCATACGGAGCACAAGCCACTGGCCTGTGATACCTGCAATAAAGCTTTTCAATTGGAAGCTAGCTTGAAAAAACATATGATTATTCACCATGGAGAAACTGAAGAAAATCATTCTAAATCCAACAAGCGGTTTTCATGCGCGACGTGTTCTAAGTCATTTGGCTGGAAATCTCATTTAAAGACTCATATAATGGCAATTCATACTGCAGAAAAGCCATTTTCGTGCACAATTTGTGATAAAAAATTCGTTCAGAAAAATTATTTGCGAACTCATATGTTGAGTAGTCACTCAGGTGTGTGCTTTACCTGCGAGAAATGCAATAAACGATGCGCCTCCGCCAGCAATCTACGAATACACATGAGATTTCACACTGGCGAAAAGCCATATGCCTGCAGTGAATGTAACAAGTCATTTAAAAGGAACGACAGCCTCAAAGTCCATATGGCATCGCATCGCGGCGAGCAGTTCACTTGCAAAGTCTGCTCAGTTAAATTTAACTCCaaaacaaattaccaaactcATATGCGGCTACACACAAGTCACTTACcgccatttttatgtttaagaTGCGACGAAAAGTTCAATTCAAAGAGTGATTtagacatacataatacaaaaagcCACGCATCTAACATGCCGTTCGGATGTGAATCTTGCGAACTAAGATTCGACGACAAAAACGTGCTAAAGAAACACCAGTTGCTTCAGCACGAGGAAAAACTAACATGTGGAATATGCATTAAATCATTTAACGCGAAAAGTGCGTTGCGAAGACACATGTCCATTCACAGCACGGAGAAGCCATTCGCATGTATAATCTGCAATAAGTTCTACAAACAAGAGCGTATACTGAAAAAACACATGGAAATACACACAGAGGAAAAACAATTCGCATGTGACAGATGCGATAAAAAATTCTACCAGAAATGCAATTTAACAAGTCATATGAGAATTCATTCGGGCGAGAAGCCATTTGTTTGCGATCGGTGTGGTAACAGTTTTAACCAGAAAAGTCATTTACGTACTCATATACTGTTTATGCATACATCAGAGCGGCCTTATTCGTGTGATGTGTGTAGTAAGAGGTTCCGGTTGAAGAGTTGTCTGCGGAATCATAAACTGGTGCATAGTGGAGACCGGCCTTATCGGTGTAATTTGTGTGAGAAGAAATACTACAAGAAGAGTGAGTTGAAGTCTCATATTACTAAAATGCATAACAACTCAAACTAA
Protein Sequence: MSQALCRACLASDIRIKVLSNSRYQEIYEKYTGEKLFFGDGCPEVLCFLCDAQLQKFCRFLELAQRSERNLTSFLNRGMQLTPHTLAPTERIHNLTVSPTKVISSLDWHLKEEVVVKTELLDDRRQGEEVYDDDVPDHDSESDPLEALTVKAEAPDTKHTIHPCEECPRRFNCTKDLNKHKTTVHKHHSCDKCGETFKKQAYLKMHMRYHTEEIPFDIKTIGEIPFVETKISELSNLIAIDGSKFSCLMCSKTFSQKGHLKTHIMAIHTGEKPFSCTLCDKKFVQRSNLSAHMRSRHVKPIIDWNMSGESGEVGEDMSAKPFACAMCSKTFAMKSYLQSHIMAMHTGERPFPCTLCDRKYTQKSHLRAHMRIAHAVEKPFECESCELRFGDAEEMRKHAKIHANEKLLGCVTCGKVFQAESDLKKHIILHHGEASLLCERSDIISDNVSKKRFPCDQCSKTFGWKSHLKTHIMAIHTGERPFSCNMCEKKFVQRSSLRVHMRTTHTEHKPLACDTCNKAFQLEASLKKHMIIHHGETEENHSKSNKRFSCATCSKSFGWKSHLKTHIMAIHTAEKPFSCTICDKKFVQKNYLRTHMLSSHSGVCFTCEKCNKRCASASNLRIHMRFHTGEKPYACSECNKSFKRNDSLKVHMASHRGEQFTCKVCSVKFNSKTNYQTHMRLHTSHLPPFLCLRCDEKFNSKSDLDIHNTKSHASNMPFGCESCELRFDDKNVLKKHQLLQHEEKLTCGICIKSFNAKSALRRHMSIHSTEKPFACIICNKFYKQERILKKHMEIHTEEKQFACDRCDKKFYQKCNLTSHMRIHSGEKPFVCDRCGNSFNQKSHLRTHILFMHTSERPYSCDVCSKRFRLKSCLRNHKLVHSGDRPYRCNLCEKKYYKKSELKSHITKMHNNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702195;
90% Identity: iTF_00703229;
80% Identity: -