Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041628.1:6830986-6841956[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00023 0.02 16.3 1.7 1 23 165 188 165 188 0.96

2 24 0.00016 0.013 16.8 3.4 1 23 191 213 191 213 0.97

3 24 9.2e-06 0.00079 20.6 2.0 1 23 248 271 248 271 0.96

4 24 6.3e-07 5.4e-05 24.3 1.6 1 23 277 300 277 300 0.97

5 24 6.1e-05 0.0052 18.1 0.1 1 23 323 346 323 346 0.94

6 24 2.7e-07 2.3e-05 25.5 1.8 1 23 352 375 352 375 0.97

7 24 0.0012 0.11 13.9 0.1 1 23 381 403 381 403 0.98

8 24 0.0019 0.16 13.3 0.2 3 23 411 432 411 432 0.94

9 24 0.00063 0.053 14.9 0.9 1 23 454 477 454 477 0.95

10 24 1.8e-07 1.5e-05 26.0 1.2 1 23 483 506 483 506 0.98

11 24 5.8e-05 0.005 18.1 0.8 3 23 514 534 512 535 0.94

12 24 5.5e-05 0.0046 18.2 1.7 1 23 549 572 549 572 0.95

13 24 2.4e-06 0.0002 22.5 1.0 1 23 578 601 578 601 0.95

14 24 1.8e-05 0.0015 19.8 3.2 1 23 606 628 606 628 0.98

15 24 2.5e-07 2.2e-05 25.5 1.2 1 23 634 656 634 656 0.97

16 24 0.0001 0.0085 17.4 3.0 1 23 661 683 661 683 0.97

17 24 0.048 4.1 8.9 1.3 2 23 691 713 690 713 0.88

18 24 0.039 3.4 9.2 1.2 3 23 721 742 719 742 0.94

19 24 1.5e-05 0.0012 20.0 0.4 2 23 747 768 746 768 0.96

20 24 0.065 5.6 8.5 0.6 1 23 774 796 774 796 0.92

21 24 1.1e-05 0.00093 20.4 4.9 1 23 802 824 802 824 0.97

22 24 3.5e-05 0.003 18.8 2.5 1 23 830 853 830 853 0.94

23 24 0.0006 0.051 14.9 4.2 1 23 859 881 859 881 0.98

24 24 5.4e-05 0.0046 18.2 1.4 1 23 887 910 887 910 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00023	0.02	16.3	1.7	1	23	165	188	165	188	0.96
2	24	0.00016	0.013	16.8	3.4	1	23	191	213	191	213	0.97
3	24	9.2e-06	0.00079	20.6	2.0	1	23	248	271	248	271	0.96
4	24	6.3e-07	5.4e-05	24.3	1.6	1	23	277	300	277	300	0.97
5	24	6.1e-05	0.0052	18.1	0.1	1	23	323	346	323	346	0.94
6	24	2.7e-07	2.3e-05	25.5	1.8	1	23	352	375	352	375	0.97
7	24	0.0012	0.11	13.9	0.1	1	23	381	403	381	403	0.98
8	24	0.0019	0.16	13.3	0.2	3	23	411	432	411	432	0.94
9	24	0.00063	0.053	14.9	0.9	1	23	454	477	454	477	0.95
10	24	1.8e-07	1.5e-05	26.0	1.2	1	23	483	506	483	506	0.98
11	24	5.8e-05	0.005	18.1	0.8	3	23	514	534	512	535	0.94
12	24	5.5e-05	0.0046	18.2	1.7	1	23	549	572	549	572	0.95
13	24	2.4e-06	0.0002	22.5	1.0	1	23	578	601	578	601	0.95
14	24	1.8e-05	0.0015	19.8	3.2	1	23	606	628	606	628	0.98
15	24	2.5e-07	2.2e-05	25.5	1.2	1	23	634	656	634	656	0.97
16	24	0.0001	0.0085	17.4	3.0	1	23	661	683	661	683	0.97
17	24	0.048	4.1	8.9	1.3	2	23	691	713	690	713	0.88
18	24	0.039	3.4	9.2	1.2	3	23	721	742	719	742	0.94
19	24	1.5e-05	0.0012	20.0	0.4	2	23	747	768	746	768	0.96
20	24	0.065	5.6	8.5	0.6	1	23	774	796	774	796	0.92
21	24	1.1e-05	0.00093	20.4	4.9	1	23	802	824	802	824	0.97
22	24	3.5e-05	0.003	18.8	2.5	1	23	830	853	830	853	0.94
23	24	0.0006	0.051	14.9	4.2	1	23	859	881	859	881	0.98
24	24	5.4e-05	0.0046	18.2	1.4	1	23	887	910	887	910	0.97

Sequence Information

Coding Sequence: atgtcTCAAAGTGTGTGTCGGGCGTGCTTAGCGAGTGATATACGAATAAAGGTGCTCAGCAGCTCTCGGTATCaagaaatttacgagaaatacTCTGGCGAGAAGCTAATCATTGGAGATGGCTTCCCAGAAGTCCTGTGCTTCCTCTGCCATGCACAGCTGCAGAAGTTCTGCAGGTTCTTCGAACTTGCCCAGAGATCGGAGAGGAACCTCATCAGCTTTCTGAACTGTGGGATGCAGCCAACACCCAACAACCTGGCACCAGCTGACAGAATCCACAACCTAGCGGTCGCTCCAACCAACGTGATATCTACACTAGAGTGGAATTtaaaagaagaagttgttgtcAAAATGGAGATGCTGCCTGGTGATATTAGACATGGAGATGAAGTGTATGATGATGATGTTCCCGACAACGACTCGGAATCGGATCCTCTAGAAGCCCTCGCAAGCCCTATCAAAGCAGAAGCGCTAGACATAAAGCACACTATCCATCCATGCGAAGAATGCCCCCGCCGTTTCAACTCCACTACAGACCTCAATAAACACAAGACAACGGTCCACAAACACCACAGCTGTGACAAATGTGAAGAAACATTCAAGAAACTAGCATATTTAAAAATGCATATGAGATACCACACCGATGAAATCCCATTCGATATCAAAACCATAGGAGAAATCCCATTCGTCGAAACTAAAATCAGTGAATTGAGCAGTTTGATAGCAATAGACGGAGCGAAATTTACTTGTGTGATGTGTagcaaaaatttcagccagaaagGGCATTTGAAAACTCATATGATGGCAATTCACACCGGAGAGAAGCCGTTTGCTTGCACGTTGTGTGATAAAAAGTTTGTTCAGCGAAGTAATCTCTCTTCCCATATGAGATCAAGACATATAAAGCCAGTAAATAACTGGAATATGAGTGAAGAAAATGGAGAAGAAGACAAGAGTGGGAAGCCCTTCGCTTGTGCGATATGCAGTAAGACTTTCGCAATGAAATCTTACCTACAATCTCATATAATGGCAATTCACACAGGAGAACGCCCGTTCCCCTGCACGTTATGCGATAGAAAATACACGCAAAAAAGCCATTTACGAGCGCATATGAGAATCGCACACGCTGTCGAGAAGCCATTCGAGTGCGATAGCTGCGAATTGCGGTTCGGAGACGCTGAGGAATTGAGGAAACATGCGAAAATACACGCGAACGAGAAGCCGCTGGGTTGTGTTACGTGTGGGAAAGTCTTTCAAGCGGAAAGCGATTTGAAGAAACATATTATTCTGCAACATGGGGAGGCGTCGCTACTTTGCGATCGCAGTGACATCATAAATGATAATGTCAGCAAAAAACGCTTCCCCTGTGACCAGTGTAACAGGACTTTCGGTTGGAAATCTCATTTAAAAACTCATATAATGGCAATTCACACCGGAGAAAGACCGTTTTCTTGTAATATGTGTGAGAAGAAGTTTGTACAAAGAAGCTCTCTTAGGGTACATATGAGAACAGCTCATACTGAGCATAAACCTATGGCTTGTGATACATGCAATAAAGCATTTCAATCTGAAGGTAGCTTGAAGAAACATATGATTATTCACCACGGAGAAACTGAGAAAAATAACTCTAAAAGTAACAAACGGTTTTCGTGCGCGACGTGTTCTAAATCATTTGGCTATAAATCTCATTTAAGAACTCATATAATGGCAATTCATACTGGAGAAAAGCCATTTTCTTGCACGATTTGTGATAAGAAATTCGTACAGAAAAATTATTTACGAGCTCATATGTTGGCTAAACACTCGGGTGTGGGCTTTACCTGTGAAAGATGCAATAAACGATGTGCGTCAGCGAGCAATTTACGAATACACATGAGATTTCACACCGGCGAGAAGCCTTACGCCTGCAGTAAATGCAACAAGTCATTTAAAAGGAATGACAGCCTCAAAGTTCATATGGCATCGCATCGCGGCGAACAGTTTAACTGCAAAGTTTGCTCAGTTAGATTTACAACCAAAACAAGCTACCAAACTCATATGCGACTTCACACAAGTCATTTACCGCCGTTTTTATGCTTAAGATGTGACGAAAAGTTCAACTCCAAGAGCGACTTAGACATGCATAATACAAAAAGTCATGCAAATGACATGCCATTCGGCTGCGATTCCTGCGAACTGAGATTCGACGAtaaaaacttcttaaaaaaacatcaattaCAACAGCACGAGGAAAAATTAACGTGCAGTATTTGCGTTAAATCATTTAACGCGAAAAGTGCGTTACGAAGGCATATGTCTATCCACAGCACAGAAAAACCATTCGCGTGTATAATCTGCAATAAATTCTACAAACAAGAGCGAATACTCAAGAAACATATGGAAATACACACGGAGGAAAAACAATTCGCTTGTAACAGATGCGATAAGAAGTTCTACCAGAAGTGCAACTTGACGAGCCATATGAGAATTCACTCGGGTGAAAAACCATTTGTTTGTGACCGGTGTGGAAATAGCTTCAACCAGAAAAGTCATTTAAGAACTCATATATTGTTTATGCATACTTCAGAAAGGCCGTACTCTTGTGATGTTTGTAGTAAGAGGTTTAGACTAAAGAGTTGTTTACGGAATCATAAGTTGGTGCATAGTGGGGAAAGACCGTATCCTTGTAGTTTATGTGAGAAGAAGTATTATAAAAAGAGTGAATTGAAGTCTCATATGGCTAAAATGCATAACTCAATATCTATAGAAAATATAACATGA
Protein Sequence: MSQSVCRACLASDIRIKVLSSSRYQEIYEKYSGEKLIIGDGFPEVLCFLCHAQLQKFCRFFELAQRSERNLISFLNCGMQPTPNNLAPADRIHNLAVAPTNVISTLEWNLKEEVVVKMEMLPGDIRHGDEVYDDDVPDNDSESDPLEALASPIKAEALDIKHTIHPCEECPRRFNSTTDLNKHKTTVHKHHSCDKCEETFKKLAYLKMHMRYHTDEIPFDIKTIGEIPFVETKISELSSLIAIDGAKFTCVMCSKNFSQKGHLKTHMMAIHTGEKPFACTLCDKKFVQRSNLSSHMRSRHIKPVNNWNMSEENGEEDKSGKPFACAICSKTFAMKSYLQSHIMAIHTGERPFPCTLCDRKYTQKSHLRAHMRIAHAVEKPFECDSCELRFGDAEELRKHAKIHANEKPLGCVTCGKVFQAESDLKKHIILQHGEASLLCDRSDIINDNVSKKRFPCDQCNRTFGWKSHLKTHIMAIHTGERPFSCNMCEKKFVQRSSLRVHMRTAHTEHKPMACDTCNKAFQSEGSLKKHMIIHHGETEKNNSKSNKRFSCATCSKSFGYKSHLRTHIMAIHTGEKPFSCTICDKKFVQKNYLRAHMLAKHSGVGFTCERCNKRCASASNLRIHMRFHTGEKPYACSKCNKSFKRNDSLKVHMASHRGEQFNCKVCSVRFTTKTSYQTHMRLHTSHLPPFLCLRCDEKFNSKSDLDMHNTKSHANDMPFGCDSCELRFDDKNFLKKHQLQQHEEKLTCSICVKSFNAKSALRRHMSIHSTEKPFACIICNKFYKQERILKKHMEIHTEEKQFACNRCDKKFYQKCNLTSHMRIHSGEKPFVCDRCGNSFNQKSHLRTHILFMHTSERPYSCDVCSKRFRLKSCLRNHKLVHSGERPYPCSLCEKKYYKKSELKSHMAKMHNSISIENIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702195;
90% Identity: iTF_00703229;
80% Identity: -