Eins017121.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402002.1:14827349-14833545[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-11 9.4e-09 35.3 0.0 4 39 120 156 117 160 0.90 2 4 5.2e-12 2.2e-09 37.3 0.4 2 39 172 209 171 212 0.93 3 4 5.3e-16 2.2e-13 50.1 0.1 2 45 227 271 226 271 0.96 4 4 2.1e-18 8.9e-16 57.7 0.0 1 44 278 322 278 323 0.96
Sequence Information
- Coding Sequence
- ATGAGTCATGAAGTGCTGGAGGAGCTAGCTCCGTTAGCACCGGCCGGACCCGCGGCGACACCAGTCTGCGTGAAACAGGAGCCCGTGGAGCACCCTGCACAGAGCCTCGAGACCTTAGAATCTGCTACTCATACCACGGGATCTTTGTTGGAGAGACACATGGCGATCTTGAGGTCATCTGAAGTGCTCAGCTCAGAGAACTTCACAACGCTGCAAGCTGTCAAGGATGAGTCTACTTCTGAAGCAGAATGGCAATCCACCGAGCAGCAGCCCACCAGCGGTGACGAGCAGAGCGACTCAAGCGGCCGACTGGAGCCCGATGGCGCTCGCGGCAGCCCCAAGACCTGGAAGCAACAAGACATGGACAACGCACTCGACGCACTGCGGAACCATCATATGAGTCTCACCAAGGCGTCATCCACCTATGGTATCCCTTCAACGACGTTGTGGCAGCGCGCGCACCGGCTTGGCATCGACACGCCGAAGAAGGAAGGCTGCGCCAAGTCGTGGAGCGAGGCGGATCTGCGAGCTGCCCTACATGCGCTTCGGGCCGGTGCCATTTCCGCCAACAAGGCCAGCAAGGCTTATGGTATACCAAGCAGTACACTGTACAAGATAGCTCGCCGCGAGGGTATCCGACTGGCTGCGCCATTCAACGCGGCACCGGTGGCGTGGCGGCGCGGAGACTTGCAGCGTGCCCTCCAAGCCATCAGAACTGGACGCGCCTCCGTGCAACGCGCCGCCACGCAGTACGGGATACCCACTGGTACCCTTTACGGGCGTTGCAAACGAGAAGGCATAGAATTATCTCGATCAAACCCCACGCCTTGGTCTGAAGACGCAATGAGAGAGGCGTTAGAAGCTGTAAGGGTTGGACAGATGTCGATTAACCAAGCAGCTATCCACTTCAACTTGCCATATTCTTCACTCTATGGAAGATTCAAAAGGTGCAACTATCAGGCTCAGCCGGTATCACATCAAGAGATCCACAATCCCCCGGAAATGGGAAACCCTCAAGATCTGAACTACTACCATCAGATGCCACGATACCAGGAGCAGGATCCGGCACAGCAACCATGCTCTCACGAGTTCAACCCAGACGCATCACCATCTCATAACAACTTGGTATTACAAGATCCTTTTTCAGGACAGACGGTCTATTACAGTCAGAATTTTAGCAGTATCGTTACCAGCTGA
- Protein Sequence
- MSHEVLEELAPLAPAGPAATPVCVKQEPVEHPAQSLETLESATHTTGSLLERHMAILRSSEVLSSENFTTLQAVKDESTSEAEWQSTEQQPTSGDEQSDSSGRLEPDGARGSPKTWKQQDMDNALDALRNHHMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGCAKSWSEADLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLQRALQAIRTGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMREALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCNYQAQPVSHQEIHNPPEMGNPQDLNYYHQMPRYQEQDPAQQPCSHEFNPDASPSHNNLVLQDPFSGQTVYYSQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- iTF_00700929; iTF_00704872; iTF_00703856; iTF_00702816; iTF_00705908; iTF_00699097;
- 80% Identity
- -