Esub020111.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- -
- Assembly
- GCA_963564075.1
- Location
- OY751113.1:761625-772084[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 1.5e-08 35.1 0.0 4 39 151 187 148 191 0.90 2 4 5.7e-12 7.4e-09 36.0 0.3 2 39 203 240 202 243 0.93 3 4 2.5e-16 3.3e-13 49.9 0.1 2 45 258 302 257 302 0.96 4 4 1e-17 1.3e-14 54.4 0.0 1 44 309 353 309 354 0.96
Sequence Information
- Coding Sequence
- ATGTCCAACTCTGTACCTGCTGCTGTAAAACGTGAACCTGCCTCTGATGAAGAAGATAACAGCCGTCAGCTAACTGATCTCTTTCTAAATGACACGAGTCATGAAGTGCTGGAGGAGCTAGCCCCGTTAGCGCCGGCCGGACCCGCGGCGACACCTGTCTGCGTCAAACAGGAACCCGTGGAGCACCCTGCGCAGAGCCTCGAGACCTTGGTGTCTGCTACACATACCTCGGGATCTTTGTTCGAGAGACACATGGCGATTTTGAGGTCATCTGAACTGCTAAGCTCGGATAACTTCACGACGTTGCAAGCTATGAAGGATGAGCCTACTTCTGAAGGagAATGCCAATCCACCGAGCAGCAGCCCACCAGCGGCGACGAGCAGAGCGACTCGAGCGGGCGACTGGAGCCTGACGGCGCTCGCGGCGGTCCCAAGACCTGGAGGCAGCAGGATATGGACAACGCACTCGACGCATTGCGAAACCATCACATGAGTCTTACTAAGGCGTCATCAACCTACGGTATTCCTTCAACGACTCTGTGGCAGCGCGCGCACCGGCTTGGCATCGACACGCCGAAGAAGGAAGGCTGCGCCAAGTCGTGGAGCGAGGCGGATCTGCGAGCTGCCCTACACGCGCTTCGGGCCGGTACCATTTCCGCCAACAAGGCCAGTAAGGCTTATGGTATACCAAGCAGCACACTGTACAAGATAGCTCGCCGTGAGGGCATCCGGCTGGCTGCGCCGTTCAACGCGGCCCCGGTGTCGTGGCGGCGCGGAGACTTGCAGCGCGCGCTCCAAGCCATCAGAACTGGACGCGCCTCCGTGCAGCGCGCTGCCACGCAGTACGGGATACCTACTGGTACCCTTTACGGGCGTTGCAAACGAGAAGGCATAGAATTGTCTCGATCGAACCCAACACCTTGGTCTGAAGACGCAATGGGAGAAGCGTTAGAAGCTGTTAGAATTGGTCAGATGTCGATTAACCAGGCAGCTATCCACTTCAACTTGCCATATTCTTCACTCTATGGAAGATTCAAAAGGTGCAAATATCAGGCTCAGCCGTTATCACATCAAGAGGTCCACAATCCCCCAGAAATGGGAAATCCTCAAGATCGGAACTACTACCCTCAGATGCCAGGATACCAGGAGCAGGATCCGGCACAGCTGCAACCATATTCTCACGAGTTCATCCCAGATACATCACCATCTCTTAACAACATGGTGCTACAAGATCCTTTCTCAGGACAGACGGTGTATTACAGCCAGAATTTTAGCAGTATAGTCACCAGCTGA
- Protein Sequence
- MSNSVPAAVKREPASDEEDNSRQLTDLFLNDTSHEVLEELAPLAPAGPAATPVCVKQEPVEHPAQSLETLVSATHTSGSLFERHMAILRSSELLSSDNFTTLQAMKDEPTSEGECQSTEQQPTSGDEQSDSSGRLEPDGARGGPKTWRQQDMDNALDALRNHHMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGCAKSWSEADLRAALHALRAGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVSWRRGDLQRALQAIRTGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQAQPLSHQEVHNPPEMGNPQDRNYYPQMPGYQEQDPAQLQPYSHEFIPDTSPSLNNMVLQDPFSGQTVYYSQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- iTF_00700016;
- 80% Identity
- -