Eint014777.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759191.1:726185-739174[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.9e-11 4.9e-08 33.2 0.0 4 39 153 189 150 193 0.90 2 4 6.7e-12 3.3e-09 36.9 0.4 2 39 205 242 204 245 0.93 3 4 5.8e-16 2.9e-13 49.9 0.1 2 45 260 304 259 304 0.96 4 4 2.3e-17 1.1e-14 54.4 0.0 1 44 311 355 311 356 0.96
Sequence Information
- Coding Sequence
- ATGCCCAACTCTGGACCTGCTGGTGTAACATGTGAACCTGCCTCTGACGGAGAAGGTAGCAGTCGTCAGTTAACTGATCTCTTTCTAAACAACACGAGTCATGAAGTGCTGGAGGAGCTAGCCCCGTTAGCGCCGGCCGGACCCGCGGCGACGCCGGTCTGCGTCAAACAGGAGCCCGTGGAGCACCCTGCGCAGAGTCTCGAGACCTTGGAGTCTGCTGCACATACCGCGGGATTCTTGTTGGAGAGACACATGGCGATTTTGAGCTCATCTGAAGTGCACAACTCGGAGAAGTTCAACTTCACGACGCTGCAAGCTGTCAAGGGTGAGCCGACTGCTGAAGGagAATACCAATCCACCGAGCAGCAGCCCACCAGCGGCGACGAGCAGAGTGACTCGAGCGGCCGACTGGAGCCTGATGGCGCTCGCGGCAGCCCCAAGACCTGGAGGCAGCAGGACATGGACAACGCACTCGACGCACTGCGGAACCATCACATGAGTCTCACCAAGGCGTCAGCAACCTATGGCATCCCTTCAACGACGCTGTGGCAGCGCGCGCACCGGCTTGGCATTGACACACCGAAGAAGGAAGGCTGCGCCAAGTCATGGAGCGAGGCTGATCTGCGAGCTGCCCTACATGCGCTTCGGGCCGGTGCCATTTCCGCCAACAAGGCCAGCAAGGCTTATGGTATACCAAGCAGCACACTGTACAAACTAGCTCGCCGCGAGGGGATCCGGCTGGCTGCGCCCTTCAACGCGGCCCCGGTGGCGTGGCGGCGCGGAGACTTGCAGCGCGCGCTCCAAGCCATCAGAACTGGGCGCGCCTCCGTGCAGCGCGCCGCCACGCAGTACGGGATACCTACTGGTACCCTTTACGGGCGTTGCAAAAGAGAAGGCATAGAATTGTCTAGATCGAACCCCACACCTTGGTCTGAAGACGCAATGGGAGAGGCGTTAGAAGCTGTTAGgatTGGTCAGATGTCGATTAACCAGGCAGCTATCCACTTCAACTTGCCATATTCTTCACTCTATGGAAGATTCAAAAGGTGCAAATATCAGGCTCAGCCGTTATCTCATCAAGAGGTTCACAATCCCCCGGAAATGGCAAACCCTCAAGATCTGAACTACTACCACCAGATGCCAGGATTCCAGGAGCAGGATCCGACACAGCAACCATATTCTCACGAGTTCATCCCAGACGCGTCACCATCTCTTAACAACATGGTGCTACAAGATACTTTTTCAGGACAGACGGTGTATTACAGCCAGAACTTCAGCAGTATAGTCTCCAGCTGA
- Protein Sequence
- MPNSGPAGVTCEPASDGEGSSRQLTDLFLNNTSHEVLEELAPLAPAGPAATPVCVKQEPVEHPAQSLETLESAAHTAGFLLERHMAILSSSEVHNSEKFNFTTLQAVKGEPTAEGEYQSTEQQPTSGDEQSDSSGRLEPDGARGSPKTWRQQDMDNALDALRNHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGCAKSWSEADLRAALHALRAGAISANKASKAYGIPSSTLYKLARREGIRLAAPFNAAPVAWRRGDLQRALQAIRTGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQAQPLSHQEVHNPPEMANPQDLNYYHQMPGFQEQDPTQQPYSHEFIPDASPSLNNMVLQDTFSGQTVYYSQNFSSIVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- iTF_00700016;
- 80% Identity
- -