Evul004004.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- -
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000018.1:8464-13126[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-11 1.3e-08 35.1 0.0 4 39 152 188 149 192 0.90 2 4 1.4e-11 9.3e-09 35.5 0.3 4 39 206 241 203 244 0.93 3 4 4.5e-16 2.9e-13 49.9 0.1 2 45 259 303 258 303 0.96 4 4 8.8e-18 5.6e-15 55.4 0.0 1 43 310 353 310 354 0.96
Sequence Information
- Coding Sequence
- ATGCCCAACCCTGGAACTGCAGCGTTAAAATGTGAACCTGCCTCTGATAAAGAAGATAAGGGTCCTCAGTTAACTGATCTCTTTCTGAATAACACGAGTGATGCAGTGCTGGAGGAGCTGGCCCCGTTAGCACCAGCCGGGCCCGCGGCAACGCCGGTCTGCGTGAAACAGGAGCCCGTGGAGCACCCTGCGCAGAGCCTCGAGACTCTGGAGTCTGCTACACATACCACGGGATTTTTGTTGGAAAGACACATGGCGATATTGAGAGCATCAGAAGAGATCAGCTCAGAGAACTTCACGACGCTGCAAGCTGTCAAGGATGAGCCTACTTTTGAaggagAATGCCAATCCACCGAGCAGCAGCCCACCAGCGGCGACGAGCAGAGTGACTCGAGTAGCCGAGTGGAGCCCGACGGCGGTGCTCGCGGTAGTCCCAAAACCTGGAGGCAGCAGGACATGGATAACGCACTCGACGCACTGCGGAACCATCACATGAGTCTCACCAAGGCTTCATCAACCTATGGTATTCCTTCAACGACGCTGTGGCAGCGCGCGCACCGGCTTGGCATCGACACACCGAAGAAGGAAGGCTGCGCCAAGTCGTGGAGCGAGGTGGATCTGCGAGCTGCCCTACACGCGCTTCGGGCCGGTGCAATTTCCGCTAACAAGGCCAGCAAGGCTTATGGTATACCAAGCAGTACACTGTACAAAATAGCTCGCCGCGAGGGTATCCGGCTGGCTGCGCCGTTCAACGCGGCACCGGTGGCTTGGCGGCGGGGAGACTTGCAGCGCGCGCTCCAAGCCATCAGAACTGGACGTGCCTCCGTGCAGCGCGCTGCAACGCAGTACGGGATACCTACTGGTACCCTTTACGGGCGTTGCAAACGAGAAGGCATAGAACTGTCTCGATCTAACCCCACGCCTTGGTCCGAGGACGCAATGGGAGAGGCGTTAGAAGCTGTTAGGGTTGGTCAGATGTCAATTAACCAGGCAGCTATACACTTCAACTTGCCATATTCTTCACTTTATGGAAGATTCAAAAGGTGCAAATACCAGGCACCATCTAATCAAGAAGTCCACAATCCCCCGGAAATGGGAAACCCTCAAGATCTGAATTACTTCCATCAGGTGCCAGGATACCAGGAGCAGGATCCACCACAGCAACCATACTCTCACGAGTTCATCCCAGACGCATCATCATCTCTCAGCAGCATGGTGCTACAAGATCCCTTTTCAGGACAGACGGTGTATTACAACCAGAATTTTAGCAGTGTAGTCACCAGCTGA
- Protein Sequence
- MPNPGTAALKCEPASDKEDKGPQLTDLFLNNTSDAVLEELAPLAPAGPAATPVCVKQEPVEHPAQSLETLESATHTTGFLLERHMAILRASEEISSENFTTLQAVKDEPTFEGECQSTEQQPTSGDEQSDSSSRVEPDGGARGSPKTWRQQDMDNALDALRNHHMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGCAKSWSEVDLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLQRALQAIRTGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQAPSNQEVHNPPEMGNPQDLNYFHQVPGYQEQDPPQQPYSHEFIPDASSSLSSMVLQDPFSGQTVYYNQNFSSVVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- iTF_00700016;
- 80% Identity
- -