Etri020107.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- OY041614.1:15240584-15249187[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2e-11 1.6e-08 35.0 0.0 4 39 150 186 147 190 0.90 2 4 9.3e-11 3.5e-08 33.9 0.3 1 39 201 239 201 242 0.94 3 4 9.5e-16 3.6e-13 49.9 0.1 2 45 257 301 256 301 0.96 4 4 3.7e-17 1.4e-14 54.4 0.0 1 44 308 352 308 353 0.96
Sequence Information
- Coding Sequence
- ATGCCCAACTCTGGACCTGCTGCTTTAAAATGTGAACCTGCCTCTGATGAAGAAGAAAACAGTCGTCAGCTAACTGATCTCTTTCTAAATGACACGAGTCATGAAGTGCTGGAGGAGCTAGCCCCGTTGGCGCCGGCCGGACCCGCGGCGACGCCGGTCTGCGTCAAACAGGAGCCCGTGGAGCACCCTGCGCAGAGCCTCGAGACCTTGGTGTCTGCTACACATACCGCGGGATTATTGGAGAGGCACATGGCGATTTTGAGGTCATCTGAAGTGCTTAGCTCGGAGAACTTCGCGACACTGCAAGCTGTCAAGGATGAGCCTACTTCTGAAGGAgAATGCCAATCTACCGAGCTGCAGGCCACCAGCGGTGACGAGCAGAGCGACTCAAGCGGTCGACTGGAGCCCGACGGCGCCCGCGGCAGCCCCAAGACCTGGAGGCAGCAGGACATGGACAACGCACTCGACGCACTGCGGAACCATCACATGAGTCTAACTAAGGCGTCATCAACCTATGGTATTCCTTCAACGACGCTCTGGCAGCGGGCGCACCGGCTTGGTATCGACACGCCGAAGAAGGAAGGCTGCGCTAAGTCGTGGAGCGAGACGGATCTGCGAGCTGCTCTATACGCGCTTCGGGCCGGTACCATTTCTGCCAACAAGGCCAGCAAGGCTTATGGTATACCAAGCAGCACACTGTACAAGATAGCTCGCCGCGAGGGTATCCGGCTGGCTGCGCCGTTCAACGCGGCCCCAGTATCGTGGCGGCGCGGTGACTTACAGCGCGCGCTCCAAGCCATCAGAACTGGTCGCGCCTCCGTGCAGCGCGCCGCCACGCAGTATGGGATACCTACTGGTACCCTTTATGGACGTTGTAAACGAGAAGGCATAGAATTGTCTCGATCGAACCCCACGCCGTGGTCTGAAGACGCAATGGGCGAGGCGTTAGAAGCTGTTAGaattGGTCAGATGTCGATTAACCAGGCAGCTATCCACTTCAACTTGCCATATTCTTCACTCTATGGAAGATTTAAAAGGTGCAAATATCAGACTCAGACTGGTTCTTTTCCTCAGCCGGTATCTCATCAAGAGGTTCATAACCCCCCAGAAATGGAAAACCCTCAAGATCTGAACTACTACCATCAGATGCCAGGATACCAGGAGCAGGATCCTGCGCATCTACCAGTACAACAACCATATTTACACGAGTTCATCCCAGCCGCATCATCATCTCTAAACAACGTGGTGCTACAAGATCCTTTCTTAGGACAGACAGTATATTACAGCCAGAATTTTAGCAGTATAGTCACCAGCTGA
- Protein Sequence
- MPNSGPAALKCEPASDEEENSRQLTDLFLNDTSHEVLEELAPLAPAGPAATPVCVKQEPVEHPAQSLETLVSATHTAGLLERHMAILRSSEVLSSENFATLQAVKDEPTSEGECQSTELQATSGDEQSDSSGRLEPDGARGSPKTWRQQDMDNALDALRNHHMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGCAKSWSETDLRAALYALRAGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVSWRRGDLQRALQAIRTGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQTQTGSFPQPVSHQEVHNPPEMENPQDLNYYHQMPGYQEQDPAHLPVQQPYLHEFIPAASSSLNNVVLQDPFLGQTVYYSQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- iTF_00700016;
- 80% Identity
- -