Eexi009509.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- -
- Assembly
- GCA_947086465.1
- Location
- OX352238.1:637035-642258[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.8 9.1e+03 -3.3 0.0 30 38 100 108 99 111 0.80 2 5 9.4e-12 9.7e-09 35.1 0.0 4 39 153 189 150 193 0.90 3 5 2.1e-12 2.2e-09 37.2 0.4 2 39 205 242 204 245 0.93 4 5 2.1e-16 2.2e-13 49.9 0.1 2 45 260 304 259 304 0.96 5 5 4.3e-17 4.4e-14 52.2 0.0 1 42 311 353 311 354 0.95
Sequence Information
- Coding Sequence
- ATGCCCAACCCTGGAACTGCTGCTGTAAAATGTGAACCTGTCTCTGATCAAGAAGATAACGGTCGTCAGTTAACGGATCTCTTTCTAAATAACACAAGTCATGAAGTGCTTCAGGAGCTAGCCCCGTTAGCGCCAGCCGGGCCCGCGGCTACGCCGGTCTGCGTGAAACAGGAGACCGTAGAGCATCCTGCGCAGAGCCTCGAGATCTTGGAGTCTGCTACACATAATTACGCGGGATCTTTGTCGGAAAGACACATGGCGATATTGAGGTCATTTGAAGTCGTCAATTCAGAGAACTTCACGACGCTGCAAGCTGTCAAGGATGAGCCTACTTCTGAAGGAGAATGCCAATCCACCGAGCATCAGCCCACCAGTGGCGACGAGCAGAGCGACTCGAGCGGCCGAGTGGAGCCCGACGGTGGCGCTCGCGGCAGCCCCAAGACCTGGAGGCAGCAGGACATGGATAACGCACTCGACGCGCTGCGGAACCATCATATGAGTCTCACCAAGGCATCATCAACCTATGGTATTCCTTCAACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCGACACGCCGAAGAAGGAAGGCTGCGCCAAGACATGGAGCGAGGCGGATCTGCGAGCTGCTCTACACGCGCTTCGGGCCGGTGCCATTTCCGCTAACAAGGCCAGCAAGGCTTACGGTATACCAAGCAGCACACTGTACAAAATAGCTCGCCGCGAGGGTATCCGGCTGGCTGCGCCGTTCAACGCGGCACCGGTGTCGTGGCGGCGCGGAGACCTGCAGCGCGCGCTCCAAGCCATCAGAACTGGACGCGCCTCCGTGCAGCGCGCTGCAACGCAGTACGGGATACCTACTGGTACCCTTTACGGGCGTTGCAAACGAGAAGGCATAGAATTGTCTCGATCGAACCCCACGCCTTGGTCTGAAGACGCAATGGGAGAGGCGTTAGAAGCTGTTAGGATTGGTCAGATGTCGATTAACCAAGCAGCTATACATTTCAACTTGCCATATTCTTCACTCTATGGAAGATTCAAAAGGTGCAAATATCAGCCACTATCTCATCAAGAAGTCCACAATCCCCCGGAAATGGGAAACCCTCAAGATCTGAACCACTACCATCAGATGTCAGGATACCAGGAGCAGGATCTACCACAGCAACCGTACTCTCACGAGTTCATCCCAGATGCATCACCATCTCTTAACAACATGGTGCTGCAAGATCCTTTTTCAGGACAGACTGTGTATTACAGCCAGAATTTTAGCAGTATAGTCACCAGCTGA
- Protein Sequence
- MPNPGTAAVKCEPVSDQEDNGRQLTDLFLNNTSHEVLQELAPLAPAGPAATPVCVKQETVEHPAQSLEILESATHNYAGSLSERHMAILRSFEVVNSENFTTLQAVKDEPTSEGECQSTEHQPTSGDEQSDSSGRVEPDGGARGSPKTWRQQDMDNALDALRNHHMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGCAKTWSEADLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVSWRRGDLQRALQAIRTGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQPLSHQEVHNPPEMGNPQDLNHYHQMSGYQEQDLPQQPYSHEFIPDASPSLNNMVLQDPFSGQTVYYSQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- iTF_00700016;
- 80% Identity
- -