Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000007.1:996772-1017785[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.9e-10 1.2e-07 32.1 0.0 1 38 513 551 513 556 0.89

2 4 9.1e-13 3.9e-10 40.1 0.1 2 39 568 605 567 608 0.94

3 4 2.8e-17 1.2e-14 54.6 0.0 1 45 622 667 622 667 0.98

4 4 6.4e-19 2.7e-16 59.8 0.0 1 44 674 718 674 719 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.9e-10	1.2e-07	32.1	0.0	1	38	513	551	513	556	0.89
2	4	9.1e-13	3.9e-10	40.1	0.1	2	39	568	605	567	608	0.94
3	4	2.8e-17	1.2e-14	54.6	0.0	1	45	622	667	622	667	0.98
4	4	6.4e-19	2.7e-16	59.8	0.0	1	44	674	718	674	719	0.96

Sequence Information

Coding Sequence: ATGCTGGACACTAGAATGGAGGGTCTTCTGAGGACCGCTGAGCAGTTGAAAATAAAGGGGCTTTGTGAAACAGCCGAAAGTGTCGATGAGGCCGAAGCAGCAACAGCCACCATCACATTATCAGAAAATATAACACAAACGGTTGTTGGAAATATTGTGAACTCATCACAGGGTAATGAAATAGTCACTACACACACAATTGAAAACAACACAAATACGCATACAACAACAGCAAATCTACAAAGTAATAACAATAATATTAATTCAAGTATTAATGCAATAGTTGGTACTCCAACGGCCACATCGACtccgcaactgcgaaaatcacgggtcagaaaacgttcaaagtctccggatacgaatcatcagcagcagcagcaacatcaacagcagcagcaacaacagcatcagcaccaacagcagcaccagcaacaacatcagcaacagcagcagcagcaacaacaacaacaacatcaacatcatcagcaacaaacaatattaagtcagaatcttaatacagcggcaatagtgagcctgcaacagaactcatctggtaATTATATACCGGTATCGGGAGGCCAAACGATAACGACGACAGCTGTTAGCCAACACAGTCCTGAAGATTCTAATCCGGATAAGCCAAGTGCTCAGAAAATCTGCAAAACTGAATCAGCAAGCTCACCGGCATCGAATAATGGCAGTGTAACTGTTGCACCTGGAACAGCCATTGTAACACAAATCGTTGTTGCCCAAAACGTTAAAGATAATAAAAACATGACCAGTATAGGAATGGGAATGAATGGCGGTCTCCTCGGAGTACCAATGGGCTTTTTAGATTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTAACAGTGACGGAGCACGTCGATTTGTCGTGCAATCCAAGTCAGGACACCAGAGATTTATCAAATCCCACCGAAGCGCTCGACATTGACAATCATTTAGCACAACATATGATCCAACGGCTTGATCAATCACCGATGCATACAATCCACCATCAGTCGTCAACTGGCGACGAGAGTAATTCAAATTTAATTCAGCATATTAAGAGTGAAGTGATTGAGGTGAAgcatcatcatcagcagcagcaacaacaacaacagttgcatgcgcagaccttatcacagcaaggacaatcacaacaacaacaacaacaacaccagcaacaacagcagcagcaacaccaacaacagcagcagcagcaacaacaacaacaccaacaacagcagcagcagcaacaacaacagcaacatcagcagcatcaagatatctctggtgcaactgtaATGGAAATTGATCCTAGCAATATCAAACACGAGCCAGGAATGATTATTACACCGGAAATTGTAACAATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCGTTGATGATTGCAAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACAACAAGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCAGTGACGTATGGCATCCCATCGACAACATTGTGGCAACGTGCCCATCGCATGGGCATCGAAACACCCAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCACTTGAGGCATTAAGAACTGGTCAAATATCAGCTAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAAATTGCCCGACGTGAGGGTATAAGATTGGCAGCACCATTTAATGCGGCACCAACAACATGGACGCCTGAAGATTTGGAGCGTGCATTAGAAGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAATTTGGTATACCAACAGGCACACTTTATGGTCGCTGTAAGCGAGAAGGTATTGAGCTATCCCGCTCTAATCCAACACCATGGTCAGAAGATGCTATGAATGAAGCATTGAATTCTGTTAGAGTGGGACAAATGTCTATAAATCAGGCGGCTATTCACTACAACCTTCCATATAGTTCCCTGTATGGCCGTTTCAAACGTGGCAAATATGATATCTCCAATACGAGTGCAACAACAATCAACAACACATCAGGCAACACAAGCGGAAGCATTGAAATAATTGAACATAGTCCAGAGAATTCGTTGCACATGTTTcagcaaacgttccaatatagtccagcgccgcagtccaatcatcagactcaacaacaacaacagcagcatcaacaacagcaacaacaacagcagcaacagcaacaacaacaccaaccccaacagcaacaacacatccatcaacaggttgttcatattcaacaccaacaaacaccacaacaacaccatcaccaacaacaacatatccaacaacaagatgttgttacctcaacaaGTCAGGTTCATACCCAAGCTGGACAAATCCAACATATATATCACAGCACCCCGGAGAGGAGTTGA
Protein Sequence: MLDTRMEGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQGNEIVTTHTIENNTNTHTTTANLQSNNNNINSSINAIVGTPTATSTPQLRKSRVRKRSKSPDTNHQQQQQHQQQQQQQHQHQQQHQQQHQQQQQQQQQQQHQHHQQQTILSQNLNTAAIVSLQQNSSGNYIPVSGGQTITTTAVSQHSPEDSNPDKPSAQKICKTESASSPASNNGSVTVAPGTAIVTQIVVAQNVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQQQQQLHAQTLSQQGQSQQQQQQHQQQQQQQHQQQQQQQQQQHQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQQQDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNTSATTINNTSGNTSGSIEIIEHSPENSLHMFQQTFQYSPAPQSNHQTQQQQQQHQQQQQQQQQQQQQHQPQQQQHIHQQVVHIQHQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00694505;
90% Identity: iTF_00663975; iTF_00427041; iTF_00893772; iTF_00664761; iTF_00694505; iTF_00984142; iTF_00665552; iTF_00426258; iTF_01541358; iTF_01396407;
80% Identity: -