Dalb024055.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- -
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000342.1:335721-358615[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.2e-11 1.4e-07 32.1 0.0 1 38 498 536 498 541 0.89 2 4 6.7e-13 1.1e-09 38.8 0.1 2 39 553 590 552 593 0.94 3 4 7.8e-18 1.3e-14 54.6 0.0 1 45 607 652 607 652 0.98 4 4 4.3e-20 7.2e-17 61.8 0.1 1 45 659 704 659 704 0.97
Sequence Information
- Coding Sequence
- ATGCTAGTTCTTCCAAGTCTTCTGGTGCTGGGTCTTCTACGGACCGCTGAGCAGTTGAAAATCAAAGGGCTCTGCGAAACAGCAGAAAGTGTTGATGAGGCAGAAGCAGCAACAGCCACAATCACATTATCAGAAAACATAACACAAACTGTTGTTGGAAATATTGTGAATTCATCACAGGGTAATGAAATAGTCACTACACACACAATTGAAAACAATACAAATACGCATACAACAACAGCAAACCTTCAAAATAGTAACAATAATATTAATACAAATATTAATGCAATAGTTGGTACCCCAACCGCCACATCGAccccacaactgcgaaaatcacgggtcagaaaacgttcaaagtctccggatacgaatcatcagcagcaacatcagcaacaacaacagcagcaacaccaacagcagcaccagcaacaacaacaacatcagcaacaacagcaacaccaacatcatcaacagcaaacaatattaagtcagaatcttaatacagcggcaatagttagtctgcaacagacctcgtccggtaattatataccggtttcgggtggacagacgataacgacgacagctgttagcCAACACAGCCCTGAAGATTCAAAGCCAAGTGCCCAGAAAATTTGCAAAACTGAAACATCAAGCTCACCGACATCGAATAATGGCAGTGTAACTGTTGCACAAGGAACAGCCATTGTAACACAAATCGTTGTAGCCCGAGACGTTAAAGATAATAAAAACATGACCAGTATAGGAATGGGAATGAACGGCGGTCTCCTTGGAGTACCAATGGGATTCTTGGATTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTAACAGTGACAGAGCACGTCGATTTGTCGTGTAATCCAAGTCAGGACACCAGAGATTTATCAAATCCCACCGAAGCGCTCGACATTGACAATCATTTAGCACAACACATGATCCAACGGCTTGATCAATCACCGATGCATACAATCCACCATCAGTCGTCAACTGGTGACGAAAGTAATTCAAATTTAATTCAGCATATTAAGAGTGAAGTGATTGAggtgaagcatcatcatcagcaacaacagcaacagttgcatgcgcaaaccttatcacagcaaggacaatcacaacaacaacagcaacaccagcagcaacaccaacagcagcagcagcagcaacaacaacaacaacagcagcagcaacaacagcagcagcagcaacaacatcagcagcatcaagatatttctggggcaactgttatggaaattgatccTAGCAATATCAAACATGAACCAGGGATGATTATCACACCGGAAATTGTTACAATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCATTGATGATTGCGAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACAACATGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCAGTGACGTACGGCATCCCATCGACAACGTTGTGGCAACGTGCCCATCGCATGGGCATCGAAACACCTAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAATAGCGCACTTGATGCATTAAGAACTGGTCAAATATCAGCTAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAGATTGCCCGACGTGAGGGTATAAGATTGGCAGCACCATTTAATGCAGCACCAACAACATGGACGCCCGAAGACTTGGAGCGTGCATTGGAAGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAATTCGGTATACCAACAGGCACACTCTATGGTCGCTGTAAGCGAGAAGGTATTGAGCTATCCCGCTCTAATCCAACACCATGGTCAGAAGATGCTATGAATGAGGCATTAAATTCTGTAAGAGTGGGACAAATGTCTATAAATCAGGCCGCTATTCACTACAACCTTCCATATAGTTCCCTGTATGGCCGTTTCAAGCGTGGCAAATATGAAACATCGAATGTGAGTGCAACATCAATCAACAACACATCAGGCAACACAAGCGGAAGCATTGAAATAATTGAACATAGTCCAGAGAATTCGTTGCACATgtttcagcaacagtttcaatatagtccagcgccgcagtctaatcatcagactcaacaacaacaacagcagcaacaacaacaacaacagcagcaacagcaacaacagcaacagcagcaacaacaacatcaacaacaccaaccgcaacagcaacaacacatccatcaacaagttgtacacattcaacaccaacaaacaccacaacaccatcatcaacaacaacatatccaacaacaAGATGTTGTTACCTCAACAAGTCAGGTTCATACCCAAGCTGGACAAATCCAACATATTTATCACAGCACCCCTGAGAGGAGTTGA
- Protein Sequence
- MLVLPSLLVLGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQGNEIVTTHTIENNTNTHTTTANLQNSNNNINTNINAIVGTPTATSTPQLRKSRVRKRSKSPDTNHQQQHQQQQQQQHQQQHQQQQQHQQQQQHQHHQQQTILSQNLNTAAIVSLQQTSSGNYIPVSGGQTITTTAVSQHSPEDSKPSAQKICKTETSSSPTSNNGSVTVAQGTAIVTQIVVARDVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQQQLHAQTLSQQGQSQQQQQHQQQHQQQQQQQQQQQQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQQHDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALDALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYETSNVSATSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQQHQQHQPQQQQHIHQQVVHIQHQQTPQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- iTF_00693681;
- 80% Identity
- -