Dtri028168.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- -
- Assembly
- GCA_963921185.1
- Location
- OY992531.1:68884205-68914346[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-10 2.9e-07 32.1 0.0 1 38 496 534 496 539 0.89 2 4 1.7e-12 2.4e-09 38.8 0.1 2 39 551 588 550 591 0.94 3 4 1.9e-17 2.8e-14 54.6 0.0 1 45 605 650 605 650 0.98 4 4 4.4e-19 6.5e-16 59.8 0.0 1 44 657 701 657 702 0.96
Sequence Information
- Coding Sequence
- ATGTTAGTTGtaataaaacacaatttcattcaaattGAGggtCTCCTGCGGACCGCTGAACAGTTGAAAATCAAAGGGCTTTGCGAAACAGCAGAAAGTGTTGATGAGGCAGAAGCAGCAACAGCCACAATCACATTATCAGAAAACATAACACAAACTGTTGTTGGAAATATTGTGAATTCATCACAGGGTAATGAAATAGTCACTACACACACAATTGAAAACAACACAAATACGCATACAACAACAGCAAACCTTCAAAATAGTAACAATAATATTAATACGAATATTAATGCAATAGTTGGTACCCCAACCGCCACATCGACCCCACAACTGCGAAAATCACGGGTCAGAAAACGTTCAAAATCTCCGGATACGAATCATCAgcagcaacatcagcaacaacaacagcagcaacaccAACAGCAGcaccagcaacaacaacaacatcagcaacagcagcaacacCAACATCATCAACAGCAAACAATATTAAGTCAGAATCTTAATACAGCGGCAATAGTTAGTCTGCAACAGACCTCGTCCGGTAATTATATACCGGTTTCGGGTGGCCAAACGATAACGACGACAGCTGTTAGCCAACACAGCTCTGAAGATTCGAAGCCAAGTGCCCAGAAAATTTGCAAAACAGAAACATCAAACTCACCGACATCAAATAATGGCAGTGTAACTGTTGCACCAGGAACAGCCATTGTAACACAAATCGTTGTAGCCCGAGACGttaaagataataaaaatatgacCAGTATAGGAATGGGaatgaaCGGTGGTCTCCTTGGAGTACCAATGGGCTTCTTGGACTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTAACAGTGACGGAGCACGTCGATTTGTCGTGTAATCCAAGTCAGGACACCAGAGATTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAACACATGATCCAACGGCTTGATCAATCACCGATGCATACAATCCACCATCAGTCGTCAACTGGCGACGAAagtaattcaaatttaattcaGCATATTAAGAGTGAAGTGATTGAGGTGAAGCATCATcatcagcaacaacagcaacagttgCATGCGCAGACCTTATCACAGCAAGGACAAtcacaacagcagcaacaacaacaccagCAGCAAcaccaacagcagcaacaacaacaacagcagcaacaacaacagcagcaacaacatcagcagCATCAAGATATTTCTGGGGCAACTGTTATGGAAATCGATCCTAGCAATATCAAACACGAACCAGGGATGATTATCACACCAGAAATTGTTACAATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCATTGATGATTGCGAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACAACATGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCAGTGACGTATGGCATCCCATCGACAACATTGTGGCAACGTGCCCATCGCATGGGCATCGAAACACCCAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCACTTGATGCATTAAGAACTGGTCAAATATCAGCTAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAAATTGCCCGACGTGAGGGTATAAGATTGGCAGCACCATTTAATGCAGCGCCAACAACATGGACGCCCGAAGATTTGGAGCGTGCATTGGAAGCAATTCGTGCTGGTCATACATCCGTCCAAAAGGCTAGCTCAGAATTTGGTATACCAACAGGCACACTCTATGGTCGCTGTAAGCGAGAAGGTATTGAGCTATCCCGCTCTAATCCAACACCATGGTCAGAAGATGCTATGAATGAGGCATTAAATTCTGTTAGagtgGGACAAATGTCTATAAATCAGGCTGCTATTCACTACAACCTTCCATATAGTTCCCTGTATGGCCGTTTTAAGCGTGGCAAATATGATATATCGAATGCGAGTGCGACATCAATCAACAACACATCAGGCAACACAAGCGGAAGCATTGAAATAATCGAACATAGTCCAGAGAATTCGTTGCACATGTTTCAGCAACAGTTCCAATATAGTCCAGCGCCGCAGTCTAATCATCAGActcaacaacagcagcagcagcaacaacaacaacaacaacaacagcagcaacaacaacagcagcagcagcagcaacaacaacatcaacaacaccAACCCCAACAGCAACAACACATCCATCAACAAGTTGTACACATTCAACACCAACAAACACCACAACAACACCACCATCAACAACAACATATCCAACAACAAGATGTTGTTACCTCAACAAGTCAGGTTCACACCCAAGCTGGACAAATCCAACATATTTATCACAGCACCCCTGAGAGGAGTTGA
- Protein Sequence
- MLVVIKHNFIQIEGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQGNEIVTTHTIENNTNTHTTTANLQNSNNNINTNINAIVGTPTATSTPQLRKSRVRKRSKSPDTNHQQQHQQQQQQQHQQQHQQQQQHQQQQQHQHHQQQTILSQNLNTAAIVSLQQTSSGNYIPVSGGQTITTTAVSQHSSEDSKPSAQKICKTETSNSPTSNNGSVTVAPGTAIVTQIVVARDVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQQQLHAQTLSQQGQSQQQQQQHQQQHQQQQQQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQQHDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALDALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNASATSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHQPQQQQHIHQQVVHIQHQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- iTF_00693681;
- 80% Identity
- -