Elun044667.1
Basic Information
- Insect
- Eupeodes luniger
- Gene Symbol
- -
- Assembly
- GCA_951509635.1
- Location
- OX608075.1:76647249-76672401[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-10 1.7e-07 32.4 0.0 1 38 538 576 538 581 0.89 2 4 6.4e-13 5.2e-10 40.4 0.1 2 39 593 630 592 633 0.94 3 4 1.9e-17 1.6e-14 54.9 0.0 1 45 647 692 647 692 0.98 4 4 0.16 1.3e+02 4.0 0.0 1 13 699 711 699 711 0.92
Sequence Information
- Coding Sequence
- ATGCTGTTTAAAGTGTCATGTCAGAAACTGACAGCGTCGTCGATAGTCAAGTTCAGAAATGACAAGGACGAACTAAGACTCGACAAGgGTCTTCTTCGGACCGCTGAGCAGTTGAAAATAAAGGGGCTTTGCGAAACAGCCGAAAGTGTCGATGAGGCCGAAGCAGCAACAGCCACCATCACATTATCAGAAAATATAACACAAACGGTTGTTGGAAATATTGTGAATTCATCACAGGGTAATGAAATAGTCACTACACACACAATTGAAAACAACACAAATACGCATACAACAACAGCAAATCTACAaagtaataacaataatattaattcaaGTATTAATGCAATAGTTGGTACCCCAACGGCCACATCGACTCCGCAACTGCGAAAATCACGGGTCAGAAAACGTTCAAAGTCTCCGGATACGaatcatcagcagcagcagcagcagcaacatcaacagcagcagcaacaacagcatcagcaccagcagcagcaccagcaacaacatcagcaacagcagcagcaacaacaacaacaacaacaccaacatcaTCAGCAACAAACAATATTAAGTCAGAATCTTAATACAGCGGCAATAGTTAGCCTGCAACAGACCTCATCTGGTAATTATATACCGGTATCGGGAGGCCAAACGATAACGACGACAGCTGTTAGCCAACACAGCCCTGAAGATTCTAATCCGGATAAGCCAAGTGCTCAGAAAATCTGCAAAACTGAATCAGCAAGCTCACCGACATCGAATAATGGAAGTGTAACTGTTGCACCTGGAACAGCCATTGTAACACAAATCGTTGTTGCCCAAAACGTTAAAGATAATAAAAACATGACCAGTATAGGAATGGGAATGaatGGCGGTCTCCTCGGAGTACCAATGGGCTTTTTAGATTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTAACAGTGACGGAGCACGTCGATTTGTCGTGTAATCCAAGTCAGGACACCAGAGATTTATCAAATCCCACCGAAGCGCTCGACATTGACAATCATTTAGCACAACATATGATCCAACGGCTTGATCAATCACCGATGCATACAATCCACCATCAGTCGTCAACTGGCGACGAgagtaattcaaatttaattcagcATATTAAGAGTGAAGTGATTGAGGTGaagcatcatcatcagcagcaacagcaacaacagttGCATGCGCAGACCTTATCACAGCAAGGACAAtcacaacaacagcaacaacaacaacaccagcaacaacagcagcagcaacaccaacagcagcagcagcagcagcaacaacaacagcaccaacaacagcagcagcagcaacaacaacagcagcatcaGCAACATCAAGATATCTCTGGTGCAACTGTTATGGAAATTGATCCTAGCAATATCAAACACGAGCCAGGAATGATTATCACACCGGAAATTGTTACAATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCGTTGATGATTGCAAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACAACAAGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCAGTGACGTATGGCATCCCATCGACAACATTGTGGCAACGTGCCCATCGCATGGGCATCGAAACACCCAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCACTTGAGGCATTAAGAACTGGTCAAATTTCAGCTAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAAATTGCCCGACGTGAGGGTATAAGATTGGCAGCACCATTTAATGCGGCACCAACAACATGGACGCCTGAAGATTTGGAGCGTGCATTAGAAGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAATTTGGTATACCAACAGgCACACTTTATGGTCGCTGTAAGCGAGAAGGTATTGAGCTATCTCGCTCTAATCCAACACCATGGTCAGAAGATGCTATGAATGAAGCATTGAATTCTGTTAGGTAA
- Protein Sequence
- MLFKVSCQKLTASSIVKFRNDKDELRLDKGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQGNEIVTTHTIENNTNTHTTTANLQSNNNNINSSINAIVGTPTATSTPQLRKSRVRKRSKSPDTNHQQQQQQQHQQQQQQQHQHQQQHQQQHQQQQQQQQQQQHQHHQQQTILSQNLNTAAIVSLQQTSSGNYIPVSGGQTITTTAVSQHSPEDSNPDKPSAQKICKTESASSPTSNNGSVTVAPGTAIVTQIVVAQNVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQQQQLHAQTLSQQGQSQQQQQQQHQQQQQQQHQQQQQQQQQQQHQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQQQDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693681; iTF_01002699;
- 90% Identity
- iTF_00693681;
- 80% Identity
- -