Maur006097.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403618.1:70033589-70048355[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.8e-11 8.8e-08 32.1 0.0 1 38 506 544 506 549 0.89 2 4 3.1e-13 2.8e-10 40.1 0.1 2 39 561 598 560 601 0.94 3 4 9.4e-18 8.4e-15 54.6 0.0 1 45 615 660 615 660 0.98 4 4 5.9e-19 5.3e-16 58.4 0.0 1 44 667 711 667 712 0.96
Sequence Information
- Coding Sequence
- ATGGTCCATCAATCATCCAAAATCCAATGCATTAATTTGAAGAGACAGTGTAGTGCGTTATGTAGTCGGAAGGGTCTTCTGCGGACTGCTGAGCAATTGAAAATCAAAGGGCTTTGCGAAACAGCCGAAAGTGTTGATGAGGCTGAGGCAGCAACAGCCACCATCACATTATCCGAGAATATAACACAAACTGTTGTTGGAAATATTGTGAATTCATCACAGGGTAATGAAATAGTCACTACACACACAATTGAAAACAACACAAATACGCATAcaacaacagcaaacctacaaaacagtaacaatattaatacaagtattaatgcaatagttgctaccccaacggccacatcgaccccacaacttcgaaaatcacgggtcagaaaacgttcaaagtctccggatcttaaccatcagcagcaacaacaacaacagcagcagcagcaacaacaccaacagcagcagcaccagcaacaacaacatcagcagcaacaacaacaccaacaacatcatcagcaacaaacaatattaagtcagaatcttaatacagcggcaatagttagtctgcaacagacctcatccggtaattatataccggttacgggtggccagacgataacgacgacagctgtcagccagcacagccCTGAGGATTCAAAGCCAAGTGCTCAGAAAATCTGCAAAACTGAATCATCTAGCTCACCGACATCGAATAATGGGAGTGTAACTGTTGCACCAGGAACAGCAATTGTAACCCAAATCGTTGTAGCCCGAGACGTTAAAGATAATAAAAACATGACCAGTATAGGAATGGGAATGAATGGCGGTCTCCTCGGAGTACCAATGGGCTTTTTAGATTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTTACAGTGACGGAACACGTCGATTTGTCGTGTAACCCAAGTCAGGATACCAGAGATTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAACATATGATccaacggctcgatcaatcaccgatgcatacaatccaccatcagtcgtccactggcgacgagagtaattctaatttaattcagcatattaagagcgaagtgattgaggttaaacatcatcatcagcaacagcagttgcatgcgcaggccttatcacagcaaggacaatcacagcaacagcagcaacaacaacaccaacagcagcagcagcagcaacaacaccaacagcagcaacaacagcagcagcagcaacaacatcaacagcatcaagatatttcgggagcaactgtcatggaaattgatccaagtaatatcaaaCACGAACCAGGAATGATTATCACACCGGAAATTGTTACAATGATGGCAACTGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCATTGATGATTGCAAATGGTTCCCCAAATGACAATAACGAGCCACACTACACAAATTTGGACCAACCAGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCGGTGACGTATGGCATCCCATCGACAACATTGTGGCAACGTGCCCATCGCATGGGCATTGAAACACCCAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCACTAGAGGCATTAAGAACTGGTCAAATATCAGCAAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAAATTGCTCGACGCGAAGGCATAAGATTAGCAGCGCCATTTAATGCAGCGCCCACAACCTGGACGCCTGAAGATTTGGAGCGTGCATTAGAAGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAATTTGGTATACCAACAGGCACACTGTACGGTCGCTGCAAGCGAGAAGGTATTGAACTATCCCGTTCTAATCCAACACCATGGTCAGAGGATGCTATGAACGAGGCATTGAATTCTGTTAGAGTGGGACAAATGTCTATAAATCAGGCGGCTATCCACTTCAACCTTCCATATAGCTCCTTGTATGGCCGTTTCAAGCGTGGCAAATATGATATATCAAATGCGAGTGCAACATCAATCAACAACACAACAGGCAACACAAGCGGAAGCATTGAAATAATTGAACATAGTCCAGAGAATTCGttgcacatgtttcagcaacagttccaatatagtccagcgccgcagtcgaatcaccagactcagcagcaacaacaacaacagcagcaacaacaacagcagcaacagcaacaacagcagcagcaacaacaacatcaacaacaccaaccacaacagcaacaacaacaacacatccatcaacaagttgtacacattcaacaccaacaaacaccacaacaacaccatcatcaacaacaacatatccaacaacaAGATGTTGTTACCTCAACAAGTCAGGTTCATACCCAGGCTGGACAAATCCAACATATTTATCACAGCACCCCAGAGAGGAGTTGA
- Protein Sequence
- MVHQSSKIQCINLKRQCSALCSRKGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQGNEIVTTHTIENNTNTHTTTANLQNSNNINTSINAIVATPTATSTPQLRKSRVRKRSKSPDLNHQQQQQQQQQQQQHQQQQHQQQQHQQQQQHQQHHQQQTILSQNLNTAAIVSLQQTSSGNYIPVTGGQTITTTAVSQHSPEDSKPSAQKICKTESSSSPTSNNGSVTVAPGTAIVTQIVVARDVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQLHAQALSQQGQSQQQQQQQHQQQQQQQQHQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHFNLPYSSLYGRFKRGKYDISNASATSINNTTGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQHQQHQPQQQQQQHIHQQVVHIQHQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- iTF_00693681;
- 80% Identity
- -