Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963082485.1
Location
OY720045.1:10956754-10971185[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-14 1.5e-11 45.0 0.0 1 42 91 133 91 136 0.92
2 2 2.8e-18 1.5e-15 57.8 0.0 1 43 296 339 296 341 0.95

Sequence Information

Coding Sequence
ATGGGTGAAAACAACTGTGCATCGTACAACTTCTACTTTCAGTACTTAAGAGATATGTACAGGACTAACCTGTTCCCTCTCCACAGGCTACCAGAGGTAGGCGACAAGCCGGTGCCCTCGTCACCAACGCTCGCAGAACAGCCCTTGGACCTTAGCGCCAAGTCTACCTCCAGCACCAGCGGAACCCCGCCGCCTGACGCCAAGATCTTGGACAGCAGGTTGAAACGAAGTGCGCTCGATGCCAACAATAGTGTAGCCAGACGTGCGTACACGGACGACGAGCTGCAGTCCGCGCTCCGGGACATCCAGTCGGGCCGGCTCGgcacgcgccgcgccgccgtcgTCTACGGCATCCCGCGCTCGACCCTTCGCAACAAAGTCAACAAATTCGGACTCTCCTCCGAACAACACGACTCGGAACCCGACAGCGACCCCGAACGACCCGAATCCCCCCCTTCCGTCATACTTAAGATACCAACATTTCCACCGCCTGATGAGAAAAGCCCGTCGCCAGCTACCCCCGTCACCACTCCTGTTACACCAATAACACCAATCATCCCACCGCCCCAACCGTCGCTGAACCCTCCTCCACATCTACCTACCTTCTTTGCGGATCCACCGGCCAACCAGCATCTCTTCACGTCTATAAACGACGTCATAGTCAGAAGTATTAGCCAAAAGTTTCAGCAATTGCCGGACCGGCCCCATCAACCCTCAGACTTACAATATATGAGGGCACCAGACCGACATGTGTCCGTAATCAAAACTCCTCCGGACAACCAGAGAAATTATCCGGTGCCGAGTAATTCTAAAGCGACGAACAACGGCCAACCCGTCACGGGAGGCAAAGGTACTAGACCGAAACGAGGCAAGTATAGAAACTACGATAGAGATAGCCTCGTGGAAGCGGTCAAAGCTGTGCAAAGGGGAGAGATGTCAGTCCATAGGGCTGGATCCTACTACGGCGTGCCACACTCTACCCTTGAATATAAAGTGAAGGAGCGGCATTTAATGCGACCGAGGAAGAGAGAGCCGAAGCCTCAACAGGATCCAAAGCCGCTTCCAAAGCCGCAGCCGAAGGTTGCACCGCCAACGAAACCGTTTTCAAACGGAATGAATGGGCCAGAAACGCCGGCGTACCCAGCCGGCTACCCGTTCTGGGCAGGCGCTGGTTTCCCGCCGCCTTCGCCGGATTTATACGCGTCGCATATGATGCGCCGGTTGCGTGAAGAAGCCCCACCGCCAGCGAACGGGTCGTTCCTCGAGGGTATAATACGGTCGAGTTTGGAGCGACCGGGTGCAGCGTTGATGCATCGATTGTCAGAGCAGCGGCCACTCGCTCCGCAAGATGCACCGAGTCTACTGCGGCGTCTGACGGGAGAGCCTGACGAGCCGCCGGCGAGACGCGCGCGGCTCGATAGCTCCGATCGGCAGCTGGCAGCGGAAATGCGTGAGGCAGTGCAGCGGCTGCGAGCAGACCGGCGGCCGCGCAACGGAACTCCGACGCCCCCCACGCCTGCCTCACCCCCGCCAGCGCCCGCTCCAGCACCCCCAGACCGCGCCTAG
Protein Sequence
MGENNCASYNFYFQYLRDMYRTNLFPLHRLPEVGDKPVPSSPTLAEQPLDLSAKSTSSTSGTPPPDAKILDSRLKRSALDANNSVARRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLSSEQHDSEPDSDPERPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPIIPPPQPSLNPPPHLPTFFADPPANQHLFTSINDVIVRSISQKFQQLPDRPHQPSDLQYMRAPDRHVSVIKTPPDNQRNYPVPSNSKATNNGQPVTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDPKPLPKPQPKVAPPTKPFSNGMNGPETPAYPAGYPFWAGAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMHRLSEQRPLAPQDAPSLLRRLTGEPDEPPARRARLDSSDRQLAAEMREAVQRLRADRRPRNGTPTPPTPASPPPAPAPAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2