Sgig071271.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963935595.1
- Location
- OZ012562.1:18159618-18176108[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-14 1.6e-11 45.9 0.0 1 41 99 140 99 144 0.93 2 2 3.3e-18 3.1e-15 57.7 0.0 1 43 304 347 304 349 0.95
Sequence Information
- Coding Sequence
- ATGGTGGCGGCGCTGGCGACGCTCGGCTCGGGGCTGGTGCCGCCTGCAGTGCTCTCCCAGGTGTGGCTGATGCAGCGGCTGGCGCAGAACAGGCCCGTGCCTGATAGGCTGCCGGAGGCGGGGGAGAAGCCGCCAGCGCCGGCGTCCCCGAGCCTCGCCGAGCAACCCCTGGACCTCAGCGCCAAGTCTACCTCGAGCACCTCGGGCACACCGCCGCCCGATTCCAGGATCCTGGATAACAGGTTGAAGCGAAGTGCTCTCGACGCAAGCAACAGCGTGTCCCGGCGGACGTACACGGAGGACGAGCTCCAGTCCGCGCTGCGGGACATCCAGTCCGGGCGGCTCGGCACGCGGCGCGCCGCCGTCGTCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTCAACAAGTTCGGGCCCGCCTCCGACCAACACGACTCCGAGCCGGACAGCGACTCCGAGAGACCGGACTCTCCCCCGTCGGTCATACTCAAGATCCCGACCTTCCCCCCGCCGGACGAGAAGAGCTCGTCCCCCGCCACGCCCGCGACGACACCCGTGACGCCCATCACCCCGATCATTCCACCGCCCCAACCCCCCCTGAATCCACCGCCCCTGCCCGCGTTCTTCGCGGACCCTCCCGCCAACCAGCACCTGTTCACGTCCATAAACGACGTCATagtcagaagcatcagccaaaAGTTCCAGCAGCTGCCCGACCGGCCGCACCAACCCCCCGACCTGCCGTACATGAGGGCGCCCGACAGGCACGTCTCCGTCATCAAGACGCCGCCGGACAACCAGAGGAGCTACCCGGCGCCGTGCAACTCGAAGGCGTCGACGAACAACGGGcagccgagcgccggcggcaaGGGCACGCGGCCCAAACGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTCGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCGACGCTCGAGTACAAGGTGAAGGAGCGGCACCTGATGCGGCCGCGGAAGCGCGAGCCGAAGCCGCCGCAGGAGCCGAAGCCGCCGCCGAAGCCGCAGCCGAAGCCGGCGCCGCCGACGAAGCCGTTCGCGAACGGGCTCAACGGGCCCGAGGCGCCCGCGTACCCGGCCGGCTACCCGTTCTGGCCGGCGGCCGGGTtcccgccgccggcgccggacCTGTACGCGTCGCACATGATGCGGCGGCTGCGCGAGGAGGCGCCGCCGCCGGCGAACGGCTCGTTCCTGGAGGGTATCATAAGGTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGAGCCGCGCGCGGTGGCCGAGGGCGCGCTGCTGCGGCGGCTGGCCGAGCCCGAGGAGCCGGCGGCGCGCCGCGCGCGGCTCGACGCCTCCGACCGGCAGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGTCCCGCCAACGGCACCGCTCCCGCGCCCgcccccgcgcccgcgcccgccgaCCCCGAGCCGCCCGCGCCCGCTCGCACGCCCACCGCTAGCGCCGCGCCCGCCCCCGCCCCGCGATCTCCTCACTCTTGTGataatattatgtaa
- Protein Sequence
- MVAALATLGSGLVPPAVLSQVWLMQRLAQNRPVPDRLPEAGEKPPAPASPSLAEQPLDLSAKSTSSTSGTPPPDSRILDNRLKRSALDASNSVSRRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGPASDQHDSEPDSDSERPDSPPSVILKIPTFPPPDEKSSSPATPATTPVTPITPIIPPPQPPLNPPPLPAFFADPPANQHLFTSINDVIVRSISQKFQQLPDRPHQPPDLPYMRAPDRHVSVIKTPPDNQRSYPAPCNSKASTNNGQPSAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQEPKPPPKPQPKPAPPTKPFANGLNGPEAPAYPAGYPFWPAAGFPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTEPRAVAEGALLRRLAEPEEPAARRARLDASDRQLAAEMREAVQRLRADKLRPANGTAPAPAPAPAPADPEPPAPARTPTASAAPAPAPRSPHSCDNIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682281;
- 90% Identity
- iTF_01333653;
- 80% Identity
- -