Pdes029354.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963921415.1
- Location
- OY992868.1:9596867-9599693[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 3.5e-11 43.7 0.0 1 41 34 75 34 79 0.92 2 2 4.2e-18 1.2e-15 58.0 0.0 1 43 241 284 241 286 0.95
Sequence Information
- Coding Sequence
- ATGGATTTTGTTCTGTATTCGTTCGTGTTCTGGGTTCATAGTGGTGCGCTGAAACGCGGGCCGATCGACAGCGCGGGGAATAGCGCTCGCCGCACCTACACCGATGAGGAGCTTCAGCTAGCCCTCCGGGACATCCAAGCCGGCCGCCTCGGCACCCGCCGCGCCGCCGTCGTCTACGGCATTCCCCGCTCCACGCTTCGTAACAAGGTCAACAAGTTCGGCCTCACCACCGACCAGCACGACTCCGAACCCGACAGCGACCCGGAGAGACCCGATTCGCCACCCTCAGTCATCCTCAAAATACCCACCTTCCCGCCACCGGACGAGAAAAGCCCGTCTCCAGCCACTCCCGTCACGACACCGGTGACACCTATCACACCCATTCTACCACAGCGGCAACCCTCTCTCAACCCCACCGGACATTTGCCAGCGTTCTTCGCTGACCCTCCGACCGCCAACCAACACCTATTCACGTCGATCAATGACGTCATCGTCCGGAGCATCAGCCAGAAGTTCCAGAACCTACCGGACCGGCCGCCGCAGCCCGGCGACATGTACATGCGTGCGCCGGATAGACACGTCTCCGTCATAAAAACTCCCCCAGAAAACCAGAGGAACTACCAGATGCCGAGCAACTCGAAGGCCACCACCAACAACAACGGCCAGCCCGCCACCGGCGGCAAGGGCACGCGGCCCAAGAGAGGCAAATACAGGAACTACGACAGGGACAGCCTCGTCGAAGCGGTCAAGGCCGTGCAAAGAGGCGAGATGTCCGTGCACCGAGCCGGATCATACTACGGAGTTCCCCACTCCACTCTGGAGTACAAGGTGAAGGAGCGGCATCTGATGCGGCCGCGGAAACGGGAGCCGAAGCCGCCGCAGGACGTCGGCAAGCCGCAGCCGCCGaagccgccgccgccaccgAAGCCTCCGACGAAGCCGTTCTCGAACGGTCTCAACGGCCCCGAGACGCCCGCGTATCCTCCAGGCTATCCGTTCTGGCCCGGTGCTGGGTTCGCGCCACCCTCGCCTGATCTGTACGCGTCACATATGATGCGGCGACTGCGCGAGGAGGTGCCTCCGCCGGCGAACGGATCGGGTTCTTTCCTCGAAGGAATTATCAGGTCGAGTCTGGAACGGCCGGGCGCCGCGCTGATGCACCGGCTGACGGGCGAGCCGCGGCCCCCGATGGCGCCGCAGGACGCGCCGAGTCTGCTCCGACGGTTAGCAGGCGAGCCGGCCGAGGAGCCGCCGATCCGGCGCCCGCGCGTCGACAGCTCGGACCGGCAGCTCGCCGCGGAGATGCGCGAGGCCGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCccacgccgcccgcgcccgcgtcgccgcccgcgccccccgccgcgccgcccgcgccccccgACCGCGCCTAA
- Protein Sequence
- MDFVLYSFVFWVHSGALKRGPIDSAGNSARRTYTDEELQLALRDIQAGRLGTRRAAVVYGIPRSTLRNKVNKFGLTTDQHDSEPDSDPERPDSPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPQRQPSLNPTGHLPAFFADPPTANQHLFTSINDVIVRSISQKFQNLPDRPPQPGDMYMRAPDRHVSVIKTPPENQRNYQMPSNSKATTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVGKPQPPKPPPPPKPPTKPFSNGLNGPETPAYPPGYPFWPGAGFAPPSPDLYASHMMRRLREEVPPPANGSGSFLEGIIRSSLERPGAALMHRLTGEPRPPMAPQDAPSLLRRLAGEPAEEPPIRRPRVDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAPASPPAPPAAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682281;
- 90% Identity
- iTF_00075397;
- 80% Identity
- -