Clat047505.1
Basic Information
- Insect
- Crambus lathoniellus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949710035.1
- Location
- OX453318.1:5292445-5316882[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 1.2e-10 42.7 0.0 1 38 84 122 84 127 0.94 2 2 2.2e-18 2.2e-15 57.9 0.0 1 43 288 331 288 333 0.95
Sequence Information
- Coding Sequence
- ATGATTGGTGATACGCAGTGTTTTCAATACCACTTGTACTTCGATTACTTTAGAGCTGTCAACAGGTTGCCGGAAGCGGGCGAGAAGGCAGCACCATCGTCGCCGACCCTTGCGGAGCAGCCGCTGGACCTGAGCGCCAAGTCAACCTCCAGCACAAGCGGCACCCCACCGCCTGATGCCAAGATCTTGGACAACAGGTTGAAGCGCGGCGCCCTTGACGCGAGCAAcagcgcggcgcggcgcgcgtACACCGACGACGAGCTACAGTGCGCGCTGCGCGACATCCAGTCAGGCCGGCTCGGCACGCGCCGCGCTGCCGTCGTCTACGGCATCCCGCGCTCCACGCTACGCAACAAAGTCAACAAGTTCGGCCTCGTCTCCGAACAACACGACTCCGAACCGGACAGCGACCCCGAACGCCCAGAGTCACCTCCCTCCGTCATACTAAAAATACCAACCTTCCCCCCGCCAGACGATAAGAGCCCTTCCCCCGCAACCCCAGTCACCACCCCCGTCACACCCATAACACCAATACTCCCCACGCAACAACCACCGCTCAACCCCCCAGCCCACCTCCCAGCGTTCTTCGCGGACCCCCCAGCCAACCAACATCTCTTCACGTCTATCAACGATGTCATAGTCAGAAGCATCAGCCAGAAGTTCCAGCAGCTGCCGGATCGACCGCAACCCTCTGACTTACCGTACATGAGGGCGCCCGATCGACACGTGTCCGTCATCAAGACGCCCCCGGACAATCAGAGAAACTACTCAGTGCCGTGCAACTCGAAGGCGACGAATAACGGCCAGCCTGCCGTTGGTGGCAAGGGCACCAGGCCCAAGCGAGGGAAGTACAGGAACTACGACCGGGATAGTCTCGTGGAAGCTGTCAAAGCGGTGCAGAGAGGAGAAATGTCAGTTCACAGAGCCGGCTCCTACTACGGAGTCCCGCACTCGACCCTCGAGTATAAAGTGAAGGAGCGACATTTGATGAGACCGAGAAAAAGAGAACCGAAGCCGCCGCAGGACCCGAAACCACCCCCGAAACCCCAACCGAAAGTGCAGCCGCCGACGAAGCCCTTCTCCAACGGCATGAACGGACCAGAAACGCCGGCGTACCCGTCCGGCTACCCGTTTTGGGCGGGAGCTGGTTTCCCGCCGCCGTCACCGGACTTGTACGCGTCGCATATGATGCGTAGACTGCGCGAAGAAGCACCGCCGCCGGCGAACGGGTCGTTCCTCGAAGGTATAATTCGGTCGAGTTTAGAACGGCCGCTGATGCATCGGCTGTCGGAGCAGCGACCCCTGGCGCCGCAGGACGCGCCGAGCCTGCTGCGGCGGCTGACGGGCGAGCCGGACGAGCCGCcggcgcggcgcgcgcggcTCGACAGCTCGGACCGGCAGCTGGCCGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCCCCCGCGCCCGCCTCGcccccgcccgcgcccgcccccgCGCCCCCCGACCGCGCCTAG
- Protein Sequence
- MIGDTQCFQYHLYFDYFRAVNRLPEAGEKAAPSSPTLAEQPLDLSAKSTSSTSGTPPPDAKILDNRLKRGALDASNSAARRAYTDDELQCALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLVSEQHDSEPDSDPERPESPPSVILKIPTFPPPDDKSPSPATPVTTPVTPITPILPTQQPPLNPPAHLPAFFADPPANQHLFTSINDVIVRSISQKFQQLPDRPQPSDLPYMRAPDRHVSVIKTPPDNQRNYSVPCNSKATNNGQPAVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDPKPPPKPQPKVQPPTKPFSNGMNGPETPAYPSGYPFWAGAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPLMHRLSEQRPLAPQDAPSLLRRLTGEPDEPPARRARLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAPASPPPAPAPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682281;
- 90% Identity
- iTF_00035568;
- 80% Identity
- -