Samb076443.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963921215.1
- Location
- OY992524.1:21007900-21020179[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-14 3.2e-11 45.1 0.0 1 42 83 125 83 128 0.92 2 2 4.2e-18 3.2e-15 57.9 0.0 1 43 288 331 288 333 0.95
Sequence Information
- Coding Sequence
- ATGGGCCGCGACGTTAGTGCATCGTACCACTTCTACTTGCAACACTTTAGAGCTATGTACAGGCTACCAGAGCCGGGCGAGAAGCCGGCACCGTCATCGCCGACCCTCGCCGAGCAGCCGCTGGACCTGAGCGCCAAGTCTACCTCCAGCACCAGCGGCACCCCCCCGCCCGACGCCAAGATCCTGGACAACAGGTTGAAACGAGGTGCTCTCGAAGCCAACAATAGTGTGGCCAGACGCGCGTACACAGACGACGAGCTGCAATCCGCGTTAAGGGACATTCAGTCGGGCCGGCTCGGCACTCGCCGCGCCGCCGTCGTGTACGGCATCCCTCGCTCCACCCTGCGCAACAAAGTCAACAAGTTCGGACTCTCCTCCGAACAGCACGATTCAGAACCCGACAGCGACCCCGAACGACCAGAATCACCCCCTTCCGTCATACTCAAGATACCAACATTCCCTCCGCCAGACGAGAAAAGCCCGTCGCCAGCTACCCCCGTCACCACACCCGTTACGCCAATAACGCCATGCATCCCACCGCCCCAACCACCGCTGAACCCTCCCGCACATTTACCAACCTTCTTTGCGGACCCACCGGCCAACCAGCATCTGTTCACGTCCATAAACGACGTCATAGTCAGAAGCATCAGCCAAAAGTTTCAACAGTTGCCCGACCGGCCGCATCAACCCTCAGACCTACAATATATGAGAGCGCCAGACCGACACGTATCCGTGATCAAAACTCCTCCGGACAACCAGAGAAATTATCCGGTGCCGAGTAACTCTAAAGCGACGAACAACGGCCAACCCGTCACGGGAGGCAAAGGTACTCGGCCCAAACGAGGCAAATATAGAAACTATGACAGAGATAGCCTCGTAGAAGCGGTCAAAGCAGTACAAAGGGGAGAGATGTCAGTCCATAGAGCCGGATCCTACTACGGCGTGCCGCACTCTACCCTCGAATACAAAGTGAAGGAGCGGCATTTAATGCGACCGAGGAAGAGGGAGCCGAAGCCGCAACAGGATCCAAAGCCGCCTCCGAAGCCTCAGCCGAAGGTGCCACCGCCGACGAAACCGTTCTCGAACGGGATGAACGGGCCCGAGACGCAGGCGTACCCGTCCGGCTACCCGTTTTGGGCAGGCGCTGGTTTCCCGCCACCTTCGCCGGATCTCTACGCGTCGCATATGATGCGCCGGTTGCGTGAAGAAGCCCCGCCGCCAGCGAACGGGTCGTTCCTGGAGGGTATAATACGGTCGAGTTTGGAGCGACCGGGTGCGGCGCTGATGCACCGGTTGTCGGAGCAGCGGCCGCTCGCGCCGCAGGACGCGCCGAGTCTACTGCGGCGGCTGACGGGCGAGCCGGACGAGCCgccggcgcggcgcgcgcggctGGACAGCTCGGACCGCCAGCTGGCGGCCGAGATGCGCGACGCCGTGCAGCGGCTGCGCGCCGACCGGCGGCCGCGCAACGGCACCCccacgccccccgcgccccccacgccgccgcccgcgcccgcccccgcgccgcccgaCCGCGCCTAG
- Protein Sequence
- MGRDVSASYHFYLQHFRAMYRLPEPGEKPAPSSPTLAEQPLDLSAKSTSSTSGTPPPDAKILDNRLKRGALEANNSVARRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLSSEQHDSEPDSDPERPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPCIPPPQPPLNPPAHLPTFFADPPANQHLFTSINDVIVRSISQKFQQLPDRPHQPSDLQYMRAPDRHVSVIKTPPDNQRNYPVPSNSKATNNGQPVTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDPKPPPKPQPKVPPPTKPFSNGMNGPETQAYPSGYPFWAGAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMHRLSEQRPLAPQDAPSLLRRLTGEPDEPPARRARLDSSDRQLAAEMRDAVQRLRADRRPRNGTPTPPAPPTPPPAPAPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682281;
- 90% Identity
- iTF_00035568;
- 80% Identity
- -