Astr030227.1
Basic Information
- Insect
- Agriphila straminella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_950108535.1
- Location
- OX467326.1:3380403-3387687[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-15 9.1e-12 45.5 0.0 1 38 65 103 65 106 0.95 2 2 1.3e-18 1.2e-15 57.9 0.0 1 43 275 318 275 320 0.95
Sequence Information
- Coding Sequence
- ATGTTGCCCAGGTTGCCCGAAGGAGCTGAGAAGCCGTCGCCCTCGTCGCCGACCCTGGCTGAGCAGCCACTGGACCTGAGCGCCAAGTCTACCTCCAGCACTAGCGGGACCCCACCGCCTGATTCCAAGATCTTGGACAACAGGTTGAAGCGCGGCGCGCTCGACAGCAacagcgcggcgcggcgcgcgtaCACCGATGACGAGCTGCAGTTGGCGCTGCGTGACATCCAGTCGGGCCGTCTCGgcacgcgccgcgccgccgtcgTTTACGGCATCCCGCGCTCCACGCTCCGCAACAAGGTCAACAAGTTCGGCCTCATCTCCGAACAACACGACTCGGAACCCGACAGCGATCCAGAACGCCCGGAATCACCCCCCTCCGTCATACTAAAAATACCAACGTTCCCCCCACCGGACGACAAGAGTCCCTCCCCAGCCACTCGCGGGAGTGGAGACTGCACCACTCCCGTCACACCGATTACACCGATAATCTCCCACCCACAACCAACACTCAACCCCCCTGCACACCTCCCAGCGTTCTTTGCGGACCCACCGGCCACCAATCAGCATCTGTTTACGTCTATCAACGATGTCATAGTCAGAAGCATCAGCCAGAAATTTCAGCAGTTGCCAGACCGACCGCATCAACCTTCTGACTTACAGTACATGAGAGCACCGGATCGACACGTATCCGTCATCAAGACGCCTCCGGAAAATCAAAGAAACTACTCAGTGCCGAGCAACTCGAAGGCGACGAATAACGGCCAGCCCGTCATGGGCGGCAAGGGCACCAGGCCCAAGCGAGGGAAGTATAGAAACTATGATCGCGATAGTCTCGTGGAAGCGGTCAAAGCGGTGCAGAGAGGCGAAATGTCAGTCCACAGAGCGGGATCCTACTACGGAGTACCGCACTCGACTCTCGAGTATAAGGTGAAGGAGCGACATTTGATGCGACCGAGAAAGAGAGAACCGAAACCGCAACAGGACCCGAAACCGCCTCCGAAGCCCCAGCCGAAAGTGCCGCAACCGACGAAGCCTTTCTCGAATGGAATGAACGGACCAGATACGCCGGCGTACCCGTCCGGTTACCCGTTCTGGGCGGGAGCTGGTTTCCCGCCGCCGTCACCGGATTTGTACGCGTCGCATATGATGCGTAGACTGCGCGAAGAAGCACCGCCGCCGGCGAACGGGTCGTTCCTCGAAGGTATAATTAGGTCGAGTTTAGAGCGACCGGGTGCGGCGTTGATGCACCGGTTGACGGAACAGCGGCCGCTCGCTCCGCAAGACGCGCCGAGTCTGCTGCGACGTCTGACAGGCGAACCCGACGAGCCGCCAGCGCGGCGCGCGCGCCTCGACAGCTCCGACCGGCAGCTGGCGCAGGAGATGCGCGAggcggtacaacggctgcgcGCTGACAAACTTCGGCCGCGCAACGGTACCCCCACGCCCCCCGCGCCCGGTTCGCCCCCGCCCGCCCCCGCACCCGCGCCCCCCGATCGCGCCTAG
- Protein Sequence
- MLPRLPEGAEKPSPSSPTLAEQPLDLSAKSTSSTSGTPPPDSKILDNRLKRGALDSNSAARRAYTDDELQLALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLISEQHDSEPDSDPERPESPPSVILKIPTFPPPDDKSPSPATRGSGDCTTPVTPITPIISHPQPTLNPPAHLPAFFADPPATNQHLFTSINDVIVRSISQKFQQLPDRPHQPSDLQYMRAPDRHVSVIKTPPENQRNYSVPSNSKATNNGQPVMGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDPKPPPKPQPKVPQPTKPFSNGMNGPDTPAYPSGYPFWAGAGFPPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMHRLTEQRPLAPQDAPSLLRRLTGEPDEPPARRARLDSSDRQLAQEMREAVQRLRADKLRPRNGTPTPPAPGSPPPAPAPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682281;
- 90% Identity
- iTF_00284453; iTF_00682281; iTF_00683236; iTF_00681582; iTF_01334680; iTF_00382491;
- 80% Identity
- -