Cper018605.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_951394215.1
- Location
- OX596222.1:8877229-8888417[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-13 6.8e-11 42.2 0.0 1 38 75 113 75 119 0.93 2 2 3.1e-18 8.6e-16 57.9 0.0 1 43 279 322 279 324 0.95
Sequence Information
- Coding Sequence
- ATGACGTTCTTCAAAAATGCAATTATAGCAATGCTACCAGAATCTGGGGAGAAGCCTCCAGCGCCGTCATCCCCCACCCTGGCTGAGCAGCCCCTCGACTTAAGCGCCAAGTCTACCTCCAGCACCAGTGGGACTCCGCCGCCTGAAGCCAAGATCCTGGACAACAGGCTGAAGCGGGCTGTGCTGGAGGGAGCAGGCAacagcggcgcgcggcgcgcgtaCACCGACGACGAGCTTCAAGCGGCCCTGCGCGACATCCAGGCCGGCCGGCTGGGCACCCGCCGCGCAGCACTGGTCTACGGCATCCCGCGCTCCACGCTCCGCAACAAGGTCAACAAGTTCGGCCTTGCCGCCGACACCCACGACTCCGACCAGGACAGCGACCCCGAACGCCCCGAATCACCCACCTCCGTCATACTCAAAATACCGACCTTCCCCCCACCTGATGATAAAAGTCCATCCCCAGCGACCCCCGTCACCACACCCGTCACCCCCATCACCCCAATCATCCCGCCGCCCCAGACTCCACTTAACACCCCCGCCCTCCCCGCCTTCTTCGCCGACCCGCCCTCAAACCAGCACATCTTCACGTCCATCAATGACGTCATAGTCCGGAGCATCAGCCAAAAGTACCAGCAGCTTCCCGACCGGCCTCAGCCCGCCGAGCTGCAGTACATGCGCGCGCCCGACCGCCACGTGTCCGTCATCAAGACCCCGCCGGAGAACCAGCGCAGCTATCCTGTGCCGAGCAACTCGAAGGCGACCAACAACAACGGGCAGCCCGCCACCGGCGGCAAGGGCACGCGCCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTTGAGGCCGTCAAGGCAGTGCAGCGCGGCGAGATGTCCGTCCACCGCGCCGGCTCCTACTACGGCGTGCCCCACTCCACCCTCGAGTACAAAGTCAAGGAGCGCCATCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCAGCCGGAGGTGAAGCCGCAGCCGCCGAAGCCGCCGCCGCCAAAGCCGCCCACCAAACCGTTCTCGAACGGGCTCAACGGGCCTGAGACGTCGTACCCGCCCGGCTACCCGTTCTGGCCGGGCGCCGGGTTCGCGCCGCCCTCGCCGGACCTGTACGCGTCGCACATGATGCGCCGGCTGCGCGAGGAGGCGCCGCCGCCGGCCAACGGCTCGTTCCTCGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGATGCACCGGCTGGCGGAGCCGCGCGCGCCGCTGGCGCCCGACGCGCCCAGCCTGCTGCGGCGGCTGGCCGGCGAGCCGGAGGAGCCGccggcgcggcgcgcacgcctCGGCAGCTCCGACCGGCAGCTGGCCGCCGAGATGCGCGAGGCCGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCCGCGCAACGGCACGCccacgccgcccgcgcccgcgtcgccgcccgcgccgcccgcgcgccgcccgaccGCGCCTAG
- Protein Sequence
- MTFFKNAIIAMLPESGEKPPAPSSPTLAEQPLDLSAKSTSSTSGTPPPEAKILDNRLKRAVLEGAGNSGARRAYTDDELQAALRDIQAGRLGTRRAALVYGIPRSTLRNKVNKFGLAADTHDSDQDSDPERPESPTSVILKIPTFPPPDDKSPSPATPVTTPVTPITPIIPPPQTPLNTPALPAFFADPPSNQHIFTSINDVIVRSISQKYQQLPDRPQPAELQYMRAPDRHVSVIKTPPENQRSYPVPSNSKATNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPEVKPQPPKPPPPKPPTKPFSNGLNGPETSYPPGYPFWPGAGFAPPSPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMHRLAEPRAPLAPDAPSLLRRLAGEPEEPPARRARLGSSDRQLAAEMREAVQRLRADKLRPAQRHAHAARARVAARAARAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682281;
- 90% Identity
- -
- 80% Identity
- -