Basic Information

Gene Symbol
kn
Assembly
GCA_963693475.1
Location
OY856353.1:19657292-19669326[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.9e-119 1.2e-114 385.3 0.0 207 387 21 219 13 222 0.98
2 2 3.2e-08 0.00043 20.3 6.0 421 509 229 323 220 390 0.66

Sequence Information

Coding Sequence
ATGTTGCCAAAGCTCATCAGTTATATGAGATTGTTCGACAATGTTGCCAAAGCTCATCAGTTATATGAGGTGGTGATATCAACGCAAGTGATGGTGGACGGCCCCTTGCTGGCTATATCCGACAACATGTTTGTCCACAACAACAGCAAGCACGGCCGCAGGGCGAAGCGGCTTGACCCCACTGAAGGTACTGACGCCGGCCCTGACAGTAATTCTGGTTTGTATCCGCCGCTGCCAGTCGCAACCCCCTGTATAAAAGCGATATCACCGAGTGAAGGGTGGACGTCAGGCGGTTCGACGGTCATCATAGTCGGAGATAACTTCTTCGATGGACTGCAAGTTGTATTCGGGACCATGCTTGTTTGGAGCGAGTTAATAACCTCCCACGCGATAAGAGTACAAACGCCTCCGAGACATATACCCGGAGTGGTGGAAGTCACGTTATCCTATAAGAGCAAACAGTTCTGCAAGGGTGCCCCGGGAAGATTCGTTTATGTTTCAGCTCTCAACGAGCCAACGATAGATTACGGGTTCCAGAGGCTACAGAAACTAATACCGAGGCATCCTGGCGACCCGGAAAAATTGCCTAAGGAAATAATTCTGAAGCGTGCGGCAGACCTTGCGGAGGCATTGTACTCCATGCCTCGGAATAATCAGCTGGGGCTAGGAGCTCCTAGGTCGCCGCCTTCCAGTATGCCTTTCAATTCCTACTCGGGGCAGTTGGCAGTCAGCGTGCAAGACACTGCTGCCTCGCAGTGGACTGAAGAGGAGTATGCGCGTAGCGGCGGTTCGGTGTCGCCTCGGTACTGTTCGGCCGCGTCTACTCCGCACGCCGCACCCGCGTCCTACCCTCATCCGCAACACTACCCTGCGCCGCCTACCTCGTTGTTCAACACCACCTCACTGTCGCTAGGCCCGTATCATCCGTCGAGCATGAATGGCCACATATCTGACCATCACTATAACGCGTATTACACGAAAGATAGCGCGTATCACAGTGAAAGAAATGAGAATAAGGGAGCTGACTGTCCGGCAAACATTCATGGAAAATGCAGTGGCACTGATATGAAAGGGGAAGGGGACAAAGGAGCTAAGAGGAGCGCCTTTGCCGTGGTGAGACAGAGTCCGCCAAGGGTGTCCAATGGACAGCAGTCTCAGCACCAGAATTGGCAGCTTGCAGTCCAATGTTAG
Protein Sequence
MLPKLISYMRLFDNVAKAHQLYEVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAGPDSNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYSGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPSSMNGHISDHHYNAYYTKDSAYHSERNENKGADCPANIHGKCSGTDMKGEGDKGAKRSAFAVVRQSPPRVSNGQQSQHQNWQLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2