Basic Information

Gene Symbol
kn
Assembly
GCA_905404285.1
Location
FR990078.1:6482318-6494800[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-119 2.3e-114 383.5 0.0 209 387 4 200 2 205 0.98
2 2 2.3e-08 0.00066 18.8 8.0 420 553 209 352 202 371 0.60

Sequence Information

Coding Sequence
ATGGGCATCTATGTGGTAATATCAACGCAAGTGATGGTGGATGGCCCCCTCCTCGCGATATCGGACAATATGTTCGTTCACAACAACAGCAAGCACGGCCGCCGGGCGAAGCGGCTCGACCCCACTGAAGGTACTGACGCCGGCCCTGACACCAATTCTGGCCTCTACCCGCCCCTACCAGTAGCAACACCCTGTATAAAAGCGATATCACCGAGTGAGGGATGGACTTCAGGCGGGTCTACCGTCATCATAGTGGGAGACAACTTCTTCGACGGCCTACAAGTCGTGTTCGGGACCATGCTGGTTTGGAGTGAGCTCATAACGTCACACGCAATACGAGTACAAACGCCTCCGAGACATATACCTGGAGTGGTGGAAGTCACGTTATCGTATAAGAGTAAACAGTTCTGCAAGGGTGCTCCGGGAAGATTCGTTTATGTTTCAGCACTCAACGAGCCGACGATAGATTACGGGTTCCAGCGGCTACAGAAGCTTATACCGAGGCACCCGGGCGACCCGGAAAAATTACCTAAGGAAATCATTCTAAAAAGAGCAGCGGACCTAGCCGAAGCCCTGTACTCTATGCCTCGGAACAACCAGCTTGGACTGGGCGCCCCGCGGTCCCCGCCTGCGAGCATGCCTTTCAACTCCTACACGGGACAGCTGGCTGTCAGCGTTCAGGACACAGCGGCTTCGCAGTGGACTGAAGAGGAGTATGCGCGTAGCGGCGGGTCGGTGTCGCCGCGGTACTGCTCCGCCGCGTCTACCCCGCACGCCGCGCCCGCTTCCTACCCACATCCGCAACACTACCCTGCGCCTCCGACGTCGCTGTTCAACACTTCCTCGCTGTCGCTTGGCCCGTACCACCCGTCGAGCATGAATGGCCACGTATCTGACCATCACTATAACGCGTATTATACGAAAGATAGCGCGTATTACACTGAAAGAAATGAGACTAAAGGCGGTGCTGACTGTCCGGCAAACACTCATGCAAAATGCAGTGGCAGTGATATGAAAGGGGACAAAGGAGCTAAGAGGAGCGCTTTTGCGGTGGTGAGACAGAGTCCGCCAAGGGTGTCCAATGTTCAGCATTCTCAGCACCAGAATTGGCAGCTCACAGTACAATGTTAG
Protein Sequence
MGIYVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAGPDTNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTSSLSLGPYHPSSMNGHVSDHHYNAYYTKDSAYYTERNETKGGADCPANTHAKCSGSDMKGDKGAKRSAFAVVRQSPPRVSNVQHSQHQNWQLTVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00634100;
90% Identity
iTF_00176893;
80% Identity
-