Basic Information

Gene Symbol
kn
Assembly
GCA_907269065.1
Location
OU026065.1:33211171-33221046[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-119 1.7e-115 387.2 0.0 204 387 3 204 1 207 0.98
2 2 7.1e-08 0.001 18.1 7.6 420 510 213 309 205 377 0.59

Sequence Information

Coding Sequence
ATGCTAGATGTTCGTGCCAAAAAGGTGGTAATATCAACGCAAGTGATGGTCGACGGTCCTCTTCTAGCGATATCAGACAACATGTTCGTCCACAACAACAGCAAGCACGGGCGGCGGGCGAAACGACTCGACCCTACTGAAGGTACTGACGCAGCACCTCAGAGTAATTCAGGTCTCTACCCACCGTTACCAGTAGCAACACCATGCATCAAGGCGATATCACCGAGTGAAGGTTGGACTTCAGGAGGCTCTACAGTCATCATAGTAGGAGACAACTTCTTCGACGGCTTACAAGTTGTGTTTGGGACCATGCTTGTTTGGAGTGAGCTGATAACATCACACGCGATCAGAGTACAAACGCCTCCTAGACATATACCTGGAGTAGTGGAAGTCACGTTATCTTATAAGAGTAAACAGTTCTGCAAGGGCGCACCTGGAAGATTCGTTTATGTTTCAGCTCTCAACGAGCCCACGATAGATTACGGATTTCAGCGGTTACAGAAACTTATACCAAGACACCCGGGCGACCCGGAAAAACTGCCCAAGGAAATCATCCTCAAAAGAGCGGCAGACTTGGCTGAGGCTTTATACTCCATGCCTAGAAACAACCAGCTCGGTTTAGGCGCGCCGAGGTCGCCCCCGGCGAGCATGCCTTTCAACTCGTACACGGGACAGCTGGCTGTCAGTGTTCAGGACACAGCTGCGTCCCAGTGGACTGAAGAGGAGTATGCGCGTAGTGGGGGTTCTGTGTCACCGAGGTATTGTTCCGCTGCATCCACCCCACACGCCGCGCCAGCGACCTACCCGCACCCTCAACACTACCCCGCGCCGCCTACCTCATTGTTCAACACTTCTTCTCTGTCGCTAGGTCCGTACCACCCGGCGAACATGAATGGCCACATATCTGACCATCACTATAACGCCTATTATACGAAAGATAGCGCGTATTACACTGAAAGAAATGCGGATTCTAAGAGCGGTGCTGACTGTCCGGCAAACAGTCATACAAAATGCAGTGGCAGTGATATGAAAGGGGAAGGGGACAAAGGAGCTAAGAGGAGTGCTTTTGCGGTGGTGAGACAGAGTCCGCCAAGGGTGTCCAATGTTCAGCAGTCTCAGCACCACAATTGGCAGCTCGCAGTCCAGTGTTAG
Protein Sequence
MLDVRAKKVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPQSNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPATYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHISDHHYNAYYTKDSAYYTERNADSKSGADCPANSHTKCSGSDMKGEGDKGAKRSAFAVVRQSPPRVSNVQQSQHHNWQLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00634100;
90% Identity
iTF_00895708;
80% Identity
-